Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm24610-201ENSMUST00000083270 109 ntBASIC5.78□□□□□ -1.48
Sox1P53783 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Sox1P53783 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Sox1P53783 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC5.78□□□□□ -1.48
Sox1P53783 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC5.78□□□□□ -1.48
Sox1P53783 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
Sox1P53783 Gm38156-201ENSMUST00000194601 2260 ntBASIC5.78□□□□□ -1.48
Sox1P53783 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC5.78□□□□□ -1.48
Sox1P53783 Gm7108-201ENSMUST00000118038 3407 ntBASIC5.78□□□□□ -1.48
Sox1P53783 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Sox1P53783 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Sox1P53783 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC5.78□□□□□ -1.48
Sox1P53783 Gm37967-201ENSMUST00000195634 2665 ntBASIC5.78□□□□□ -1.48
Sox1P53783 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Sox1P53783 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Sox1P53783 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.48
Sox1P53783 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Sox1P53783 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Sox1P53783 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
Sox1P53783 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Sox1P53783 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Sox1P53783 AC163731.1-201ENSMUST00000225696 3118 ntBASIC5.77□□□□□ -1.49
Sox1P53783 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Sox1P53783 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Sox1P53783 Gm43842-201ENSMUST00000202890 2982 ntBASIC5.77□□□□□ -1.49
Sox1P53783 AC160115.1-201ENSMUST00000224678 1574 ntBASIC5.77□□□□□ -1.49
Sox1P53783 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC5.77□□□□□ -1.49
Sox1P53783 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
Sox1P53783 AC153494.1-201ENSMUST00000218664 3041 ntBASIC5.77□□□□□ -1.49
Sox1P53783 Gm23193-201ENSMUST00000102427 82 ntBASIC5.77□□□□□ -1.49
Sox1P53783 Mir450-2-201ENSMUST00000102444 69 ntBASIC5.77□□□□□ -1.49
Sox1P53783 Gm14125-201ENSMUST00000113442 680 ntBASIC5.77□□□□□ -1.49
Sox1P53783 Gm12543-201ENSMUST00000120410 543 ntBASIC5.77□□□□□ -1.49
Sox1P53783 Gm14364-201ENSMUST00000129209 267 ntBASIC5.77□□□□□ -1.49
Sox1P53783 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Sox1P53783 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
Sox1P53783 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Sox1P53783 Gm3170-201ENSMUST00000168753 850 ntBASIC5.77□□□□□ -1.49
Sox1P53783 Gm3348-201ENSMUST00000177813 850 ntBASIC5.77□□□□□ -1.49
Sox1P53783 Gm22851-201ENSMUST00000178741 94 ntBASIC5.77□□□□□ -1.49
Sox1P53783 Gm25314-201ENSMUST00000178810 79 ntBASIC5.77□□□□□ -1.49
Sox1P53783 Gm25412-201ENSMUST00000180258 107 ntBASIC5.77□□□□□ -1.49
Sox1P53783 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC5.77□□□□□ -1.49
Sox1P53783 Npn2-202ENSMUST00000189275 235 ntBASIC5.77□□□□□ -1.49
Sox1P53783 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC5.77□□□□□ -1.49
Sox1P53783 Gm17781-201ENSMUST00000195232 649 ntBASIC5.77□□□□□ -1.49
Sox1P53783 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC5.77□□□□□ -1.49
Sox1P53783 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC5.77□□□□□ -1.49
Sox1P53783 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Sox1P53783 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
Sox1P53783 Gm17915-201ENSMUST00000222077 548 ntBASIC5.77□□□□□ -1.49
Sox1P53783 AC154592.1-201ENSMUST00000225784 574 ntBASIC5.77□□□□□ -1.49
Sox1P53783 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Sox1P53783 Gm22572-201ENSMUST00000082985 105 ntBASIC5.77□□□□□ -1.49
Sox1P53783 Gm25793-201ENSMUST00000083287 107 ntBASIC5.77□□□□□ -1.49
Sox1P53783 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Sox1P53783 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC5.77□□□□□ -1.49
Sox1P53783 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC5.77□□□□□ -1.49
Sox1P53783 AC114585.1-201ENSMUST00000228080 3680 ntBASIC5.77□□□□□ -1.49
Sox1P53783 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Sox1P53783 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC5.77□□□□□ -1.49
Sox1P53783 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Sox1P53783 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Sox1P53783 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Sox1P53783 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Sox1P53783 Gm44676-201ENSMUST00000208520 3055 ntBASIC5.77□□□□□ -1.49
Sox1P53783 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC5.77□□□□□ -1.49
Sox1P53783 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Sox1P53783 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Sox1P53783 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Sox1P53783 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Sox1P53783 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Sox1P53783 AC154841.1-201ENSMUST00000227263 1479 ntBASIC5.77□□□□□ -1.49
Sox1P53783 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Sox1P53783 Gm8401-201ENSMUST00000120248 1739 ntBASIC5.77□□□□□ -1.49
Sox1P53783 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sox1P53783 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sox1P53783 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sox1P53783 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
Sox1P53783 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
Sox1P53783 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sox1P53783 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sox1P53783 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Sox1P53783 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Sox1P53783 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sox1P53783 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sox1P53783 Gm42955-201ENSMUST00000197355 3393 ntBASIC5.76□□□□□ -1.49
Sox1P53783 Gm37551-201ENSMUST00000195556 2861 ntBASIC5.76□□□□□ -1.49
Sox1P53783 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sox1P53783 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sox1P53783 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC5.76□□□□□ -1.49
Sox1P53783 Gm25088-201ENSMUST00000101803 79 ntBASIC5.76□□□□□ -1.49
Sox1P53783 Gm24429-201ENSMUST00000104076 132 ntBASIC5.76□□□□□ -1.49
Sox1P53783 Gm22493-201ENSMUST00000104494 132 ntBASIC5.76□□□□□ -1.49
Sox1P53783 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC5.76□□□□□ -1.49
Sox1P53783 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Sox1P53783 Gm14790-201ENSMUST00000117760 1293 ntBASIC5.76□□□□□ -1.49
Sox1P53783 Gm14681-201ENSMUST00000118047 411 ntBASIC5.76□□□□□ -1.49
Sox1P53783 Gm14594-201ENSMUST00000118052 537 ntBASIC5.76□□□□□ -1.49
Sox1P53783 Gm14590-201ENSMUST00000118934 537 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms