Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm43259-201ENSMUST00000198446 3277 ntBASIC3.71□□□□□ -1.81
Nkx2-1P50220 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Nkx2-1P50220 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Nkx2-1P50220 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Nkx2-1P50220 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC3.71□□□□□ -1.82
Nkx2-1P50220 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
Nkx2-1P50220 Gm26067-201ENSMUST00000103789 110 ntBASIC3.71□□□□□ -1.82
Nkx2-1P50220 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Nkx2-1P50220 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC3.71□□□□□ -1.82
Nkx2-1P50220 Mir1188-201ENSMUST00000116756 120 ntBASIC3.71□□□□□ -1.82
Nkx2-1P50220 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC3.71□□□□□ -1.82
Nkx2-1P50220 Gm13785-201ENSMUST00000119099 690 ntBASIC3.71□□□□□ -1.82
Nkx2-1P50220 Gm14591-201ENSMUST00000120407 518 ntBASIC3.71□□□□□ -1.82
Nkx2-1P50220 Gm14905-201ENSMUST00000122351 639 ntBASIC3.71□□□□□ -1.82
Nkx2-1P50220 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC3.71□□□□□ -1.82
Nkx2-1P50220 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC3.71□□□□□ -1.82
Nkx2-1P50220 Gm13092-201ENSMUST00000136346 260 ntBASIC3.71□□□□□ -1.82
Nkx2-1P50220 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Nkx2-1P50220 Gm2892-201ENSMUST00000145537 711 ntBASIC3.71□□□□□ -1.82
Nkx2-1P50220 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Nkx2-1P50220 Gm23171-201ENSMUST00000157159 264 ntBASIC3.71□□□□□ -1.82
Nkx2-1P50220 Gm25906-201ENSMUST00000158489 126 ntBASIC3.71□□□□□ -1.82
Nkx2-1P50220 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC3.71□□□□□ -1.82
Nkx2-1P50220 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC3.71□□□□□ -1.82
Nkx2-1P50220 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Nkx2-1P50220 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Nkx2-1P50220 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Nkx2-1P50220 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Nkx2-1P50220 Gm24754-201ENSMUST00000177997 107 ntBASIC3.71□□□□□ -1.82
Nkx2-1P50220 Gm8221-201ENSMUST00000178052 564 ntBASIC3.71□□□□□ -1.82
Nkx2-1P50220 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Nkx2-1P50220 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Nkx2-1P50220 Mir7037-201ENSMUST00000184414 65 ntBASIC3.71□□□□□ -1.82
Nkx2-1P50220 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Nkx2-1P50220 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC3.71□□□□□ -1.82
Nkx2-1P50220 Gm33571-201ENSMUST00000193271 657 ntBASIC3.71□□□□□ -1.82
Nkx2-1P50220 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC3.71□□□□□ -1.82
Nkx2-1P50220 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Nkx2-1P50220 Gm43104-201ENSMUST00000197234 311 ntBASIC3.71□□□□□ -1.82
Nkx2-1P50220 Gm8069-201ENSMUST00000197887 154 ntBASIC3.71□□□□□ -1.82
Nkx2-1P50220 Igkv12-66-201ENSMUST00000199305 348 ntBASIC3.71□□□□□ -1.82
Nkx2-1P50220 Gm44402-201ENSMUST00000203677 238 ntBASIC3.71□□□□□ -1.82
Nkx2-1P50220 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC3.71□□□□□ -1.82
Nkx2-1P50220 Gm44543-201ENSMUST00000209136 396 ntBASIC3.71□□□□□ -1.82
Nkx2-1P50220 AC138284.5-201ENSMUST00000214389 652 ntBASIC3.71□□□□□ -1.82
Nkx2-1P50220 Olfr1496-203ENSMUST00000219412 1067 ntAPPRIS P2 BASIC3.71□□□□□ -1.82
Nkx2-1P50220 AC152979.4-201ENSMUST00000219893 379 ntBASIC3.71□□□□□ -1.82
Nkx2-1P50220 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC3.71□□□□□ -1.82
Nkx2-1P50220 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Nkx2-1P50220 Olfr1496-201ENSMUST00000057390 1067 ntAPPRIS ALT1 BASIC3.71□□□□□ -1.82
Nkx2-1P50220 Olfr205-201ENSMUST00000074125 990 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Nkx2-1P50220 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Nkx2-1P50220 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Nkx2-1P50220 Mir350-201ENSMUST00000083639 99 ntBASIC3.71□□□□□ -1.82
Nkx2-1P50220 Gm23796-201ENSMUST00000084011 160 ntBASIC3.71□□□□□ -1.82
Nkx2-1P50220 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Nkx2-1P50220 Olfr625-ps1-201ENSMUST00000098195 966 ntAPPRIS P5 BASIC3.71□□□□□ -1.82
Nkx2-1P50220 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Nkx2-1P50220 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC3.71□□□□□ -1.82
Nkx2-1P50220 Gm37211-201ENSMUST00000193392 3433 ntBASIC3.71□□□□□ -1.82
Nkx2-1P50220 AC164297.6-201ENSMUST00000224643 1568 ntBASIC3.71□□□□□ -1.82
Nkx2-1P50220 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Nkx2-1P50220 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Nkx2-1P50220 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Nkx2-1P50220 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Nkx2-1P50220 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Nkx2-1P50220 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC3.7□□□□□ -1.82
Nkx2-1P50220 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Nkx2-1P50220 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
Nkx2-1P50220 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Nkx2-1P50220 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Nkx2-1P50220 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
Nkx2-1P50220 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Nkx2-1P50220 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Nkx2-1P50220 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Nkx2-1P50220 Gm14931-201ENSMUST00000111079 253 ntBASIC3.7□□□□□ -1.82
Nkx2-1P50220 Gm14365-201ENSMUST00000117535 587 ntBASIC3.7□□□□□ -1.82
Nkx2-1P50220 Gm15670-201ENSMUST00000117740 447 ntBASIC3.7□□□□□ -1.82
Nkx2-1P50220 Gm11984-201ENSMUST00000118142 766 ntBASIC3.7□□□□□ -1.82
Nkx2-1P50220 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC3.7□□□□□ -1.82
Nkx2-1P50220 Gm11822-201ENSMUST00000119177 415 ntBASIC3.7□□□□□ -1.82
Nkx2-1P50220 Gm14586-201ENSMUST00000119571 408 ntBASIC3.7□□□□□ -1.82
Nkx2-1P50220 Gm14534-201ENSMUST00000120045 357 ntBASIC3.7□□□□□ -1.82
Nkx2-1P50220 Gm16053-201ENSMUST00000120511 188 ntBASIC3.7□□□□□ -1.82
Nkx2-1P50220 Gm13557-201ENSMUST00000120771 382 ntBASIC3.7□□□□□ -1.82
Nkx2-1P50220 Gm14559-201ENSMUST00000121745 496 ntBASIC3.7□□□□□ -1.82
Nkx2-1P50220 n-R5s45-201ENSMUST00000122592 110 ntBASIC3.7□□□□□ -1.82
Nkx2-1P50220 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC3.7□□□□□ -1.82
Nkx2-1P50220 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC3.7□□□□□ -1.82
Nkx2-1P50220 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC3.7□□□□□ -1.82
Nkx2-1P50220 Gm23781-201ENSMUST00000157940 308 ntBASIC3.7□□□□□ -1.82
Nkx2-1P50220 Gm23819-201ENSMUST00000158744 109 ntBASIC3.7□□□□□ -1.82
Nkx2-1P50220 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Nkx2-1P50220 Gm17061-201ENSMUST00000163167 499 ntBASIC3.7□□□□□ -1.82
Nkx2-1P50220 Mir5106-201ENSMUST00000174936 73 ntBASIC3.7□□□□□ -1.82
Nkx2-1P50220 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Nkx2-1P50220 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC3.7□□□□□ -1.82
Nkx2-1P50220 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC3.7□□□□□ -1.82
Nkx2-1P50220 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Nkx2-1P50220 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC3.7□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms