Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Gm38264-201ENSMUST00000194850 2032 ntBASIC3.56□□□□□ -1.84
Tnfsf4P43488 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Tnfsf4P43488 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
Tnfsf4P43488 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Tnfsf4P43488 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Tnfsf4P43488 Gm43259-201ENSMUST00000198446 3277 ntBASIC3.56□□□□□ -1.84
Tnfsf4P43488 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Tnfsf4P43488 Gm336-201ENSMUST00000186376 1480 ntBASIC3.56□□□□□ -1.84
Tnfsf4P43488 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Tnfsf4P43488 AC153969.1-201ENSMUST00000214047 2605 ntBASIC3.56□□□□□ -1.84
Tnfsf4P43488 AC124572.2-201ENSMUST00000218041 5152 ntBASIC3.56□□□□□ -1.84
Tnfsf4P43488 Gm37393-201ENSMUST00000195118 3870 ntBASIC3.56□□□□□ -1.84
Tnfsf4P43488 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Tnfsf4P43488 Gm24281-201ENSMUST00000104234 136 ntBASIC3.56□□□□□ -1.84
Tnfsf4P43488 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Tnfsf4P43488 Gm13118-201ENSMUST00000120402 549 ntBASIC3.56□□□□□ -1.84
Tnfsf4P43488 Gm6373-201ENSMUST00000121026 360 ntBASIC3.56□□□□□ -1.84
Tnfsf4P43488 Gm13440-201ENSMUST00000121665 496 ntBASIC3.56□□□□□ -1.84
Tnfsf4P43488 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC3.56□□□□□ -1.84
Tnfsf4P43488 Gm26148-201ENSMUST00000157430 68 ntBASIC3.56□□□□□ -1.84
Tnfsf4P43488 Gm24503-201ENSMUST00000158454 135 ntBASIC3.56□□□□□ -1.84
Tnfsf4P43488 Gm25534-201ENSMUST00000175365 125 ntBASIC3.56□□□□□ -1.84
Tnfsf4P43488 Mir1251-201ENSMUST00000175486 84 ntBASIC3.56□□□□□ -1.84
Tnfsf4P43488 Gm22395-201ENSMUST00000177427 96 ntBASIC3.56□□□□□ -1.84
Tnfsf4P43488 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
Tnfsf4P43488 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
Tnfsf4P43488 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC3.56□□□□□ -1.84
Tnfsf4P43488 Mir6345-201ENSMUST00000184286 128 ntBASIC3.56□□□□□ -1.84
Tnfsf4P43488 Gm17916-202ENSMUST00000187634 1187 ntBASIC3.56□□□□□ -1.84
Tnfsf4P43488 Mrgprb13-201ENSMUST00000188191 985 ntBASIC3.56□□□□□ -1.84
Tnfsf4P43488 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC3.56□□□□□ -1.84
Tnfsf4P43488 Gm42526-201ENSMUST00000198956 393 ntBASIC3.56□□□□□ -1.84
Tnfsf4P43488 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.56□□□□□ -1.84
Tnfsf4P43488 Gm3829-201ENSMUST00000222362 619 ntBASIC3.56□□□□□ -1.84
Tnfsf4P43488 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Tnfsf4P43488 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Tnfsf4P43488 Gm7099-201ENSMUST00000080066 554 ntBASIC3.56□□□□□ -1.84
Tnfsf4P43488 Olfr1143-201ENSMUST00000090708 945 ntBASIC3.56□□□□□ -1.84
Tnfsf4P43488 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Tnfsf4P43488 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Tnfsf4P43488 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Tnfsf4P43488 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
Tnfsf4P43488 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Tnfsf4P43488 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC3.56□□□□□ -1.84
Tnfsf4P43488 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Tnfsf4P43488 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Tnfsf4P43488 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
Tnfsf4P43488 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Tnfsf4P43488 Mir551b-201ENSMUST00000102165 98 ntBASIC3.55□□□□□ -1.84
Tnfsf4P43488 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Tnfsf4P43488 Gm15926-201ENSMUST00000120492 550 ntBASIC3.55□□□□□ -1.84
Tnfsf4P43488 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Tnfsf4P43488 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC3.55□□□□□ -1.84
Tnfsf4P43488 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Tnfsf4P43488 Gm25386-201ENSMUST00000157814 288 ntBASIC3.55□□□□□ -1.84
Tnfsf4P43488 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
Tnfsf4P43488 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC3.55□□□□□ -1.84
Tnfsf4P43488 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Tnfsf4P43488 Gm37209-201ENSMUST00000194109 1276 ntBASIC3.55□□□□□ -1.84
Tnfsf4P43488 Gm6057-201ENSMUST00000195927 314 ntBASIC3.55□□□□□ -1.84
Tnfsf4P43488 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC3.55□□□□□ -1.84
Tnfsf4P43488 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC3.55□□□□□ -1.84
Tnfsf4P43488 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.55□□□□□ -1.84
Tnfsf4P43488 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC3.55□□□□□ -1.84
Tnfsf4P43488 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Tnfsf4P43488 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Tnfsf4P43488 Gm37588-201ENSMUST00000195024 2496 ntBASIC3.55□□□□□ -1.84
Tnfsf4P43488 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Tnfsf4P43488 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
Tnfsf4P43488 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Tnfsf4P43488 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Tnfsf4P43488 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Tnfsf4P43488 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Tnfsf4P43488 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Tnfsf4P43488 Gm14299-201ENSMUST00000117586 397 ntBASIC3.54□□□□□ -1.84
Tnfsf4P43488 Gm12788-201ENSMUST00000119090 308 ntBASIC3.54□□□□□ -1.84
Tnfsf4P43488 Gm6584-201ENSMUST00000119671 447 ntBASIC3.54□□□□□ -1.84
Tnfsf4P43488 Amd-ps1-201ENSMUST00000120127 994 ntBASIC3.54□□□□□ -1.84
Tnfsf4P43488 Gm11982-201ENSMUST00000121480 314 ntBASIC3.54□□□□□ -1.84
Tnfsf4P43488 Gm15885-201ENSMUST00000122114 388 ntBASIC3.54□□□□□ -1.84
Tnfsf4P43488 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC3.54□□□□□ -1.84
Tnfsf4P43488 Gm22889-201ENSMUST00000158639 58 ntBASIC3.54□□□□□ -1.84
Tnfsf4P43488 Gm25369-201ENSMUST00000158848 132 ntBASIC3.54□□□□□ -1.84
Tnfsf4P43488 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC3.54□□□□□ -1.84
Tnfsf4P43488 Gm5527-201ENSMUST00000179821 642 ntBASIC3.54□□□□□ -1.84
Tnfsf4P43488 Gm6947-201ENSMUST00000186254 78 ntBASIC3.54□□□□□ -1.84
Tnfsf4P43488 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Tnfsf4P43488 Gm38201-201ENSMUST00000192143 387 ntBASIC3.54□□□□□ -1.84
Tnfsf4P43488 Gm28724-202ENSMUST00000194218 295 ntBASIC3.54□□□□□ -1.84
Tnfsf4P43488 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC3.54□□□□□ -1.84
Tnfsf4P43488 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC3.54□□□□□ -1.84
Tnfsf4P43488 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC3.54□□□□□ -1.84
Tnfsf4P43488 CT025616.1-201ENSMUST00000221158 412 ntBASIC3.54□□□□□ -1.84
Tnfsf4P43488 CT030242.2-201ENSMUST00000221588 148 ntBASIC3.54□□□□□ -1.84
Tnfsf4P43488 AC102815.1-201ENSMUST00000226662 1061 ntBASIC3.54□□□□□ -1.84
Tnfsf4P43488 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
Tnfsf4P43488 Snord21-201ENSMUST00000082519 94 ntBASIC3.54□□□□□ -1.84
Tnfsf4P43488 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Tnfsf4P43488 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Tnfsf4P43488 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms