Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Usp4P35123 Gm37964-201ENSMUST00000192459 4905 ntBASIC5.4□□□□□ -1.54
Usp4P35123 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Usp4P35123 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Usp4P35123 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC5.4□□□□□ -1.54
Usp4P35123 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Usp4P35123 Gm44248-201ENSMUST00000203079 1549 ntBASIC5.4□□□□□ -1.54
Usp4P35123 Mir1188-201ENSMUST00000116756 120 ntBASIC5.4□□□□□ -1.54
Usp4P35123 Gm14197-201ENSMUST00000117480 1049 ntBASIC5.4□□□□□ -1.54
Usp4P35123 Gm14793-201ENSMUST00000118739 311 ntBASIC5.4□□□□□ -1.54
Usp4P35123 Gm14901-201ENSMUST00000119001 283 ntBASIC5.4□□□□□ -1.54
Usp4P35123 Gm14871-201ENSMUST00000119056 194 ntBASIC5.4□□□□□ -1.54
Usp4P35123 Gm12808-201ENSMUST00000120597 404 ntBASIC5.4□□□□□ -1.54
Usp4P35123 Gm7670-201ENSMUST00000121272 641 ntBASIC5.4□□□□□ -1.54
Usp4P35123 Gm12685-201ENSMUST00000121702 214 ntBASIC5.4□□□□□ -1.54
Usp4P35123 Gm23211-201ENSMUST00000122717 308 ntBASIC5.4□□□□□ -1.54
Usp4P35123 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC5.4□□□□□ -1.54
Usp4P35123 Gm23774-201ENSMUST00000158990 131 ntBASIC5.4□□□□□ -1.54
Usp4P35123 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Usp4P35123 Gm2343-201ENSMUST00000161177 1042 ntBASIC5.4□□□□□ -1.54
Usp4P35123 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC5.4□□□□□ -1.54
Usp4P35123 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC5.4□□□□□ -1.54
Usp4P35123 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Usp4P35123 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC5.4□□□□□ -1.54
Usp4P35123 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC5.4□□□□□ -1.54
Usp4P35123 Gm27688-201ENSMUST00000183634 91 ntBASIC5.4□□□□□ -1.54
Usp4P35123 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC5.4□□□□□ -1.54
Usp4P35123 Gm20162-201ENSMUST00000193629 871 ntBASIC5.4□□□□□ -1.54
Usp4P35123 Gm37404-201ENSMUST00000195726 359 ntBASIC5.4□□□□□ -1.54
Usp4P35123 Gm43238-201ENSMUST00000196463 359 ntBASIC5.4□□□□□ -1.54
Usp4P35123 Gm43675-201ENSMUST00000199468 1184 ntBASIC5.4□□□□□ -1.54
Usp4P35123 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC5.4□□□□□ -1.54
Usp4P35123 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC5.4□□□□□ -1.54
Usp4P35123 AC131720.2-201ENSMUST00000220420 431 ntBASIC5.4□□□□□ -1.54
Usp4P35123 AL807824.1-201ENSMUST00000223151 183 ntBASIC5.4□□□□□ -1.54
Usp4P35123 AC113031.3-201ENSMUST00000226552 190 ntBASIC5.4□□□□□ -1.54
Usp4P35123 AC139758.1-201ENSMUST00000226573 930 ntBASIC5.4□□□□□ -1.54
Usp4P35123 AC154371.1-201ENSMUST00000226600 412 ntBASIC5.4□□□□□ -1.54
Usp4P35123 AC160930.1-201ENSMUST00000227194 337 ntBASIC5.4□□□□□ -1.54
Usp4P35123 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Usp4P35123 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Usp4P35123 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Usp4P35123 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Usp4P35123 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Usp4P35123 Gm22456-201ENSMUST00000082578 125 ntBASIC5.4□□□□□ -1.54
Usp4P35123 Gm23378-201ENSMUST00000082942 107 ntBASIC5.4□□□□□ -1.54
Usp4P35123 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Usp4P35123 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Usp4P35123 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Usp4P35123 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Usp4P35123 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Usp4P35123 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Usp4P35123 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Usp4P35123 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Usp4P35123 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC5.39□□□□□ -1.55
Usp4P35123 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Usp4P35123 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Usp4P35123 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Usp4P35123 Gm23431-201ENSMUST00000104006 107 ntBASIC5.39□□□□□ -1.55
Usp4P35123 Mir879-201ENSMUST00000104703 76 ntBASIC5.39□□□□□ -1.55
Usp4P35123 Gm14677-201ENSMUST00000117866 486 ntBASIC5.39□□□□□ -1.55
Usp4P35123 Gm13681-201ENSMUST00000117925 210 ntBASIC5.39□□□□□ -1.55
Usp4P35123 Gm8595-201ENSMUST00000118250 630 ntBASIC5.39□□□□□ -1.55
Usp4P35123 Gm12016-201ENSMUST00000119079 681 ntBASIC5.39□□□□□ -1.55
Usp4P35123 Gm12704-201ENSMUST00000119789 464 ntBASIC5.39□□□□□ -1.55
Usp4P35123 Gm14619-201ENSMUST00000120480 168 ntBASIC5.39□□□□□ -1.55
Usp4P35123 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC5.39□□□□□ -1.55
Usp4P35123 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Usp4P35123 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC5.39□□□□□ -1.55
Usp4P35123 Gm25603-201ENSMUST00000158361 105 ntBASIC5.39□□□□□ -1.55
Usp4P35123 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC5.39□□□□□ -1.55
Usp4P35123 Mir5106-201ENSMUST00000174936 73 ntBASIC5.39□□□□□ -1.55
Usp4P35123 Gm23799-201ENSMUST00000175559 120 ntBASIC5.39□□□□□ -1.55
Usp4P35123 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC5.39□□□□□ -1.55
Usp4P35123 Gm23568-201ENSMUST00000177960 92 ntBASIC5.39□□□□□ -1.55
Usp4P35123 Gm22166-201ENSMUST00000178419 121 ntBASIC5.39□□□□□ -1.55
Usp4P35123 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC5.39□□□□□ -1.55
Usp4P35123 Gm23288-201ENSMUST00000179213 121 ntBASIC5.39□□□□□ -1.55
Usp4P35123 Gm24829-201ENSMUST00000179245 92 ntBASIC5.39□□□□□ -1.55
Usp4P35123 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Usp4P35123 Gm25942-201ENSMUST00000180080 110 ntBASIC5.39□□□□□ -1.55
Usp4P35123 Mir7087-201ENSMUST00000184840 70 ntBASIC5.39□□□□□ -1.55
Usp4P35123 Gm29216-201ENSMUST00000187117 492 ntBASIC5.39□□□□□ -1.55
Usp4P35123 Gm29634-201ENSMUST00000188467 696 ntBASIC5.39□□□□□ -1.55
Usp4P35123 Gm28699-201ENSMUST00000189193 696 ntBASIC5.39□□□□□ -1.55
Usp4P35123 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC5.39□□□□□ -1.55
Usp4P35123 Gm8823-201ENSMUST00000193158 433 ntBASIC5.39□□□□□ -1.55
Usp4P35123 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC5.39□□□□□ -1.55
Usp4P35123 Gm44456-201ENSMUST00000196554 89 ntBASIC5.39□□□□□ -1.55
Usp4P35123 Gm44277-201ENSMUST00000205128 649 ntBASIC5.39□□□□□ -1.55
Usp4P35123 Gm44634-201ENSMUST00000206119 152 ntBASIC5.39□□□□□ -1.55
Usp4P35123 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Usp4P35123 AC161256.1-201ENSMUST00000217312 213 ntBASIC5.39□□□□□ -1.55
Usp4P35123 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC5.39□□□□□ -1.55
Usp4P35123 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC5.39□□□□□ -1.55
Usp4P35123 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Usp4P35123 Gm8288-201ENSMUST00000223406 593 ntBASIC5.39□□□□□ -1.55
Usp4P35123 AC165092.2-201ENSMUST00000224681 368 ntBASIC5.39□□□□□ -1.55
Usp4P35123 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Usp4P35123 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms