Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC3.37□□□□□ -1.87
Sdc1P18828 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Sdc1P18828 Mir3097-201ENSMUST00000175356 67 ntBASIC3.37□□□□□ -1.87
Sdc1P18828 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Sdc1P18828 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Sdc1P18828 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Sdc1P18828 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC3.37□□□□□ -1.87
Sdc1P18828 Gm38332-201ENSMUST00000194189 147 ntBASIC3.37□□□□□ -1.87
Sdc1P18828 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC3.37□□□□□ -1.87
Sdc1P18828 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC3.37□□□□□ -1.87
Sdc1P18828 Gm17956-201ENSMUST00000199931 838 ntBASIC3.37□□□□□ -1.87
Sdc1P18828 Gm43975-201ENSMUST00000203023 481 ntBASIC3.37□□□□□ -1.87
Sdc1P18828 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC3.37□□□□□ -1.87
Sdc1P18828 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC3.37□□□□□ -1.87
Sdc1P18828 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC3.37□□□□□ -1.87
Sdc1P18828 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Sdc1P18828 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC3.37□□□□□ -1.87
Sdc1P18828 AL772397.1-201ENSMUST00000216707 606 ntBASIC3.37□□□□□ -1.87
Sdc1P18828 Gm46190-201ENSMUST00000219650 427 ntBASIC3.37□□□□□ -1.87
Sdc1P18828 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC3.37□□□□□ -1.87
Sdc1P18828 CT025598.1-201ENSMUST00000225140 427 ntBASIC3.37□□□□□ -1.87
Sdc1P18828 AC125539.2-201ENSMUST00000228339 753 ntBASIC3.37□□□□□ -1.87
Sdc1P18828 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Sdc1P18828 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Sdc1P18828 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Sdc1P18828 Gm23464-201ENSMUST00000083145 147 ntBASIC3.37□□□□□ -1.87
Sdc1P18828 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC3.37□□□□□ -1.87
Sdc1P18828 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Sdc1P18828 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Sdc1P18828 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
Sdc1P18828 AC190403.1-201ENSMUST00000224515 1325 ntBASIC3.37□□□□□ -1.87
Sdc1P18828 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Sdc1P18828 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Sdc1P18828 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
Sdc1P18828 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
Sdc1P18828 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Sdc1P18828 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Sdc1P18828 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Sdc1P18828 Gm10811-201ENSMUST00000221985 2448 ntBASIC3.36□□□□□ -1.87
Sdc1P18828 Gm42481-201ENSMUST00000196822 2178 ntBASIC3.36□□□□□ -1.87
Sdc1P18828 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Sdc1P18828 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Sdc1P18828 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Sdc1P18828 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Sdc1P18828 Gm37802-201ENSMUST00000194998 2643 ntBASIC3.36□□□□□ -1.87
Sdc1P18828 Gm43374-201ENSMUST00000202498 2391 ntBASIC3.36□□□□□ -1.87
Sdc1P18828 Mir680-1-201ENSMUST00000102257 109 ntBASIC3.36□□□□□ -1.87
Sdc1P18828 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
Sdc1P18828 Gm15994-201ENSMUST00000118029 402 ntBASIC3.36□□□□□ -1.87
Sdc1P18828 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC3.36□□□□□ -1.87
Sdc1P18828 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Sdc1P18828 Gm11344-201ENSMUST00000122011 335 ntBASIC3.36□□□□□ -1.87
Sdc1P18828 Defa-ps12-201ENSMUST00000122353 193 ntBASIC3.36□□□□□ -1.87
Sdc1P18828 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC3.36□□□□□ -1.87
Sdc1P18828 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Sdc1P18828 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Sdc1P18828 Gm24251-201ENSMUST00000157324 114 ntBASIC3.36□□□□□ -1.87
Sdc1P18828 Gm22312-201ENSMUST00000158005 130 ntBASIC3.36□□□□□ -1.87
Sdc1P18828 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
Sdc1P18828 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Sdc1P18828 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Sdc1P18828 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Sdc1P18828 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Sdc1P18828 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC3.36□□□□□ -1.87
Sdc1P18828 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Sdc1P18828 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Sdc1P18828 Gm9541-201ENSMUST00000188409 502 ntBASIC3.36□□□□□ -1.87
Sdc1P18828 Gm5731-201ENSMUST00000190969 481 ntBASIC3.36□□□□□ -1.87
Sdc1P18828 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC3.36□□□□□ -1.87
Sdc1P18828 Gm37681-201ENSMUST00000193880 727 ntBASIC3.36□□□□□ -1.87
Sdc1P18828 Gm19065-202ENSMUST00000203910 1165 ntBASIC3.36□□□□□ -1.87
Sdc1P18828 Gm44887-201ENSMUST00000208980 178 ntBASIC3.36□□□□□ -1.87
Sdc1P18828 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC3.36□□□□□ -1.87
Sdc1P18828 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Sdc1P18828 Olfr44-203ENSMUST00000216316 1078 ntAPPRIS ALT2 TSL 3 BASIC3.36□□□□□ -1.87
Sdc1P18828 Gm5917-201ENSMUST00000217638 721 ntBASIC3.36□□□□□ -1.87
Sdc1P18828 Gm18904-201ENSMUST00000218756 329 ntBASIC3.36□□□□□ -1.87
Sdc1P18828 Gm7540-201ENSMUST00000219764 926 ntBASIC3.36□□□□□ -1.87
Sdc1P18828 AC135019.1-201ENSMUST00000219949 307 ntBASIC3.36□□□□□ -1.87
Sdc1P18828 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Sdc1P18828 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC3.36□□□□□ -1.87
Sdc1P18828 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Sdc1P18828 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Sdc1P18828 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Sdc1P18828 Olfr44-201ENSMUST00000077757 1071 ntAPPRIS P2 TSL 3 BASIC3.36□□□□□ -1.87
Sdc1P18828 Gm22829-201ENSMUST00000083771 106 ntBASIC3.36□□□□□ -1.87
Sdc1P18828 Gm23796-201ENSMUST00000084011 160 ntBASIC3.36□□□□□ -1.87
Sdc1P18828 Gm7381-201ENSMUST00000098958 300 ntBASIC3.36□□□□□ -1.87
Sdc1P18828 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Sdc1P18828 Gm43260-201ENSMUST00000197378 2430 ntBASIC3.36□□□□□ -1.87
Sdc1P18828 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Sdc1P18828 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Sdc1P18828 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Sdc1P18828 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Sdc1P18828 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Sdc1P18828 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC3.35□□□□□ -1.87
Sdc1P18828 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Sdc1P18828 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Sdc1P18828 Gm4736-201ENSMUST00000100870 380 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Gm23226-201ENSMUST00000116927 103 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms