Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Hoxd3P09027 Gm37831-201ENSMUST00000191685 1787 ntBASIC5□□□□□ -1.61
Hoxd3P09027 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
Hoxd3P09027 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Hoxd3P09027 Gm44045-201ENSMUST00000204906 2520 ntBASIC5□□□□□ -1.61
Hoxd3P09027 Gm38284-201ENSMUST00000194803 4539 ntBASIC5□□□□□ -1.61
Hoxd3P09027 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC5□□□□□ -1.61
Hoxd3P09027 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC5□□□□□ -1.61
Hoxd3P09027 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Hoxd3P09027 Gm44530-201ENSMUST00000207920 3559 ntBASIC5□□□□□ -1.61
Hoxd3P09027 Gm44894-201ENSMUST00000205280 2174 ntBASIC4.99□□□□□ -1.61
Hoxd3P09027 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Hoxd3P09027 Gm45697-201ENSMUST00000212893 2876 ntBASIC4.99□□□□□ -1.61
Hoxd3P09027 Gm7155-201ENSMUST00000121143 1671 ntBASIC4.99□□□□□ -1.61
Hoxd3P09027 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Hoxd3P09027 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Hoxd3P09027 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Hoxd3P09027 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Hoxd3P09027 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Hoxd3P09027 Gm5362-201ENSMUST00000211968 3085 ntBASIC4.99□□□□□ -1.61
Hoxd3P09027 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Hoxd3P09027 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
Hoxd3P09027 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
Hoxd3P09027 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
Hoxd3P09027 Mir743b-201ENSMUST00000104751 77 ntBASIC4.99□□□□□ -1.61
Hoxd3P09027 Gm4989-201ENSMUST00000118711 749 ntBASIC4.99□□□□□ -1.61
Hoxd3P09027 Gm14566-201ENSMUST00000118915 321 ntBASIC4.99□□□□□ -1.61
Hoxd3P09027 Gm12630-201ENSMUST00000121575 784 ntBASIC4.99□□□□□ -1.61
Hoxd3P09027 Gm26023-201ENSMUST00000122722 313 ntBASIC4.99□□□□□ -1.61
Hoxd3P09027 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Hoxd3P09027 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Hoxd3P09027 Gm25374-201ENSMUST00000158158 101 ntBASIC4.99□□□□□ -1.61
Hoxd3P09027 Gm24501-201ENSMUST00000158452 62 ntBASIC4.99□□□□□ -1.61
Hoxd3P09027 Gm22891-201ENSMUST00000158641 164 ntBASIC4.99□□□□□ -1.61
Hoxd3P09027 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Hoxd3P09027 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC4.99□□□□□ -1.61
Hoxd3P09027 Gm23632-201ENSMUST00000175289 125 ntBASIC4.99□□□□□ -1.61
Hoxd3P09027 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Hoxd3P09027 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC4.99□□□□□ -1.61
Hoxd3P09027 Mir3473e-201ENSMUST00000183932 110 ntBASIC4.99□□□□□ -1.61
Hoxd3P09027 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Hoxd3P09027 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC4.99□□□□□ -1.61
Hoxd3P09027 Ighv1-14-201ENSMUST00000194015 402 ntBASIC4.99□□□□□ -1.61
Hoxd3P09027 Gm38060-201ENSMUST00000194822 464 ntBASIC4.99□□□□□ -1.61
Hoxd3P09027 Gm42799-201ENSMUST00000201331 328 ntBASIC4.99□□□□□ -1.61
Hoxd3P09027 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Hoxd3P09027 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC4.99□□□□□ -1.61
Hoxd3P09027 Gm3800-201ENSMUST00000221086 554 ntBASIC4.99□□□□□ -1.61
Hoxd3P09027 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC4.99□□□□□ -1.61
Hoxd3P09027 AC156802.1-201ENSMUST00000223623 579 ntBASIC4.99□□□□□ -1.61
Hoxd3P09027 n-R5s56-201ENSMUST00000082521 105 ntBASIC4.99□□□□□ -1.61
Hoxd3P09027 Gm26454-201ENSMUST00000082682 107 ntBASIC4.99□□□□□ -1.61
Hoxd3P09027 Gm22744-201ENSMUST00000083444 65 ntBASIC4.99□□□□□ -1.61
Hoxd3P09027 Gm23845-201ENSMUST00000083834 152 ntBASIC4.99□□□□□ -1.61
Hoxd3P09027 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC4.99□□□□□ -1.61
Hoxd3P09027 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Hoxd3P09027 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Hoxd3P09027 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Hoxd3P09027 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
Hoxd3P09027 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC4.99□□□□□ -1.61
Hoxd3P09027 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Hoxd3P09027 Gm28291-202ENSMUST00000186921 1499 ntTSL 5 BASIC4.99□□□□□ -1.61
Hoxd3P09027 Gm28633-202ENSMUST00000190867 1485 ntTSL 5 BASIC4.99□□□□□ -1.61
Hoxd3P09027 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Hoxd3P09027 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Hoxd3P09027 Gm37769-201ENSMUST00000193753 2369 ntBASIC4.99□□□□□ -1.61
Hoxd3P09027 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Hoxd3P09027 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Hoxd3P09027 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Hoxd3P09027 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
Hoxd3P09027 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC4.98□□□□□ -1.61
Hoxd3P09027 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Hoxd3P09027 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Hoxd3P09027 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
Hoxd3P09027 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Hoxd3P09027 Gm42727-201ENSMUST00000202446 2823 ntBASIC4.98□□□□□ -1.61
Hoxd3P09027 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Hoxd3P09027 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Hoxd3P09027 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Hoxd3P09027 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
Hoxd3P09027 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Hoxd3P09027 Gm14296-202ENSMUST00000108931 750 ntBASIC4.98□□□□□ -1.61
Hoxd3P09027 Gm15026-201ENSMUST00000119219 458 ntBASIC4.98□□□□□ -1.61
Hoxd3P09027 Gm15377-201ENSMUST00000119594 246 ntBASIC4.98□□□□□ -1.61
Hoxd3P09027 Gm11879-201ENSMUST00000121885 702 ntBASIC4.98□□□□□ -1.61
Hoxd3P09027 Gm14298-201ENSMUST00000139032 237 ntBASIC4.98□□□□□ -1.61
Hoxd3P09027 Gm16356-201ENSMUST00000143300 169 ntBASIC4.98□□□□□ -1.61
Hoxd3P09027 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Hoxd3P09027 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC4.98□□□□□ -1.61
Hoxd3P09027 Gm24676-201ENSMUST00000158758 75 ntBASIC4.98□□□□□ -1.61
Hoxd3P09027 Gm10177-201ENSMUST00000160052 444 ntBASIC4.98□□□□□ -1.61
Hoxd3P09027 Gm8580-201ENSMUST00000160295 464 ntBASIC4.98□□□□□ -1.61
Hoxd3P09027 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC4.98□□□□□ -1.61
Hoxd3P09027 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Hoxd3P09027 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Hoxd3P09027 Gm8114-201ENSMUST00000172225 484 ntBASIC4.98□□□□□ -1.61
Hoxd3P09027 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
Hoxd3P09027 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Hoxd3P09027 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Hoxd3P09027 n-R5s109-201ENSMUST00000179195 119 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms