Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm11262-201ENSMUST00000119326 833 ntBASIC4.81□□□□□ -1.64
Col3a1P08121 Mup-ps10-201ENSMUST00000119626 556 ntBASIC4.81□□□□□ -1.64
Col3a1P08121 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Col3a1P08121 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC4.81□□□□□ -1.64
Col3a1P08121 Gm23777-201ENSMUST00000158994 259 ntBASIC4.81□□□□□ -1.64
Col3a1P08121 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC4.81□□□□□ -1.64
Col3a1P08121 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Col3a1P08121 Gm23860-201ENSMUST00000179446 132 ntBASIC4.81□□□□□ -1.64
Col3a1P08121 Olfr1055-202ENSMUST00000188023 939 ntBASIC4.81□□□□□ -1.64
Col3a1P08121 Gm17781-201ENSMUST00000195232 649 ntBASIC4.81□□□□□ -1.64
Col3a1P08121 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC4.81□□□□□ -1.64
Col3a1P08121 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Col3a1P08121 Gm9023-201ENSMUST00000198408 1038 ntBASIC4.81□□□□□ -1.64
Col3a1P08121 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Col3a1P08121 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Col3a1P08121 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC4.81□□□□□ -1.64
Col3a1P08121 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC4.81□□□□□ -1.64
Col3a1P08121 Gm7380-201ENSMUST00000211599 466 ntBASIC4.81□□□□□ -1.64
Col3a1P08121 Gm3333-202ENSMUST00000221763 1044 ntBASIC4.81□□□□□ -1.64
Col3a1P08121 AC164883.9-201ENSMUST00000228042 399 ntBASIC4.81□□□□□ -1.64
Col3a1P08121 Gm4991-201ENSMUST00000118899 1552 ntBASIC4.81□□□□□ -1.64
Col3a1P08121 Gm37176-201ENSMUST00000193300 4051 ntBASIC4.81□□□□□ -1.64
Col3a1P08121 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
Col3a1P08121 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col3a1P08121 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col3a1P08121 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col3a1P08121 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Col3a1P08121 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC4.81□□□□□ -1.64
Col3a1P08121 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
Col3a1P08121 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
Col3a1P08121 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
Col3a1P08121 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
Col3a1P08121 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col3a1P08121 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Col3a1P08121 Gm26273-201ENSMUST00000104180 131 ntBASIC4.81□□□□□ -1.64
Col3a1P08121 Gm22543-201ENSMUST00000104347 94 ntBASIC4.81□□□□□ -1.64
Col3a1P08121 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col3a1P08121 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Col3a1P08121 Gm11393-201ENSMUST00000118019 288 ntBASIC4.81□□□□□ -1.64
Col3a1P08121 Gm14943-201ENSMUST00000118056 546 ntBASIC4.81□□□□□ -1.64
Col3a1P08121 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC4.81□□□□□ -1.64
Col3a1P08121 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC4.81□□□□□ -1.64
Col3a1P08121 Gm14714-201ENSMUST00000119743 439 ntBASIC4.81□□□□□ -1.64
Col3a1P08121 Gm14991-201ENSMUST00000119913 598 ntBASIC4.81□□□□□ -1.64
Col3a1P08121 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Col3a1P08121 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC4.81□□□□□ -1.64
Col3a1P08121 Gm44501-201ENSMUST00000167713 1229 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
Col3a1P08121 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC4.81□□□□□ -1.64
Col3a1P08121 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Col3a1P08121 Gm28997-201ENSMUST00000188759 429 ntBASIC4.81□□□□□ -1.64
Col3a1P08121 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Col3a1P08121 Gm28466-201ENSMUST00000190678 659 ntBASIC4.81□□□□□ -1.64
Col3a1P08121 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC4.81□□□□□ -1.64
Col3a1P08121 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC4.81□□□□□ -1.64
Col3a1P08121 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Col3a1P08121 Gm19243-201ENSMUST00000198592 269 ntBASIC4.81□□□□□ -1.64
Col3a1P08121 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC4.81□□□□□ -1.64
Col3a1P08121 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Col3a1P08121 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC4.81□□□□□ -1.64
Col3a1P08121 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC4.81□□□□□ -1.64
Col3a1P08121 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC4.81□□□□□ -1.64
Col3a1P08121 Gm46138-201ENSMUST00000215294 426 ntBASIC4.81□□□□□ -1.64
Col3a1P08121 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC4.81□□□□□ -1.64
Col3a1P08121 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC4.81□□□□□ -1.64
Col3a1P08121 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC4.81□□□□□ -1.64
Col3a1P08121 Gm18116-201ENSMUST00000220920 537 ntBASIC4.81□□□□□ -1.64
Col3a1P08121 AC134864.1-201ENSMUST00000226326 511 ntBASIC4.81□□□□□ -1.64
Col3a1P08121 CT010505.1-201ENSMUST00000227026 396 ntBASIC4.81□□□□□ -1.64
Col3a1P08121 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col3a1P08121 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC4.81□□□□□ -1.64
Col3a1P08121 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC4.81□□□□□ -1.64
Col3a1P08121 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Col3a1P08121 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
Col3a1P08121 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col3a1P08121 Gm44678-201ENSMUST00000207828 2775 ntBASIC4.81□□□□□ -1.64
Col3a1P08121 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Col3a1P08121 Gm15902-202ENSMUST00000219623 3477 ntBASIC4.8□□□□□ -1.64
Col3a1P08121 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Col3a1P08121 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Col3a1P08121 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Col3a1P08121 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Col3a1P08121 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Col3a1P08121 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Col3a1P08121 Gm22497-201ENSMUST00000104499 131 ntBASIC4.8□□□□□ -1.64
Col3a1P08121 Gm14687-201ENSMUST00000120206 363 ntBASIC4.8□□□□□ -1.64
Col3a1P08121 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Col3a1P08121 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Col3a1P08121 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Col3a1P08121 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Col3a1P08121 Gm23168-201ENSMUST00000157156 143 ntBASIC4.8□□□□□ -1.64
Col3a1P08121 Gm26401-201ENSMUST00000158502 76 ntBASIC4.8□□□□□ -1.64
Col3a1P08121 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Col3a1P08121 Gm27036-201ENSMUST00000182465 980 ntBASIC4.8□□□□□ -1.64
Col3a1P08121 Gm27468-201ENSMUST00000183577 106 ntBASIC4.8□□□□□ -1.64
Col3a1P08121 Mir6385-201ENSMUST00000184295 105 ntBASIC4.8□□□□□ -1.64
Col3a1P08121 Gm18342-201ENSMUST00000186987 694 ntBASIC4.8□□□□□ -1.64
Col3a1P08121 Gm8939-201ENSMUST00000192577 964 ntBASIC4.8□□□□□ -1.64
Col3a1P08121 Gm36997-201ENSMUST00000195090 707 ntBASIC4.8□□□□□ -1.64
Col3a1P08121 Gm8023-201ENSMUST00000195298 903 ntBASIC4.8□□□□□ -1.64
Col3a1P08121 Gm6057-201ENSMUST00000195927 314 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms