Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Mup-ps8-201ENSMUST00000178663 545 ntBASIC4.28□□□□□ -1.72
Shisa8J3QNX5 Mup-ps9-201ENSMUST00000178847 545 ntBASIC4.28□□□□□ -1.72
Shisa8J3QNX5 Mup-ps6-201ENSMUST00000179564 545 ntBASIC4.28□□□□□ -1.72
Shisa8J3QNX5 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Shisa8J3QNX5 Gm27409-201ENSMUST00000184727 80 ntBASIC4.28□□□□□ -1.72
Shisa8J3QNX5 Gm28597-201ENSMUST00000187664 666 ntBASIC4.28□□□□□ -1.72
Shisa8J3QNX5 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC4.28□□□□□ -1.72
Shisa8J3QNX5 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC4.28□□□□□ -1.72
Shisa8J3QNX5 Gm28467-201ENSMUST00000190981 318 ntBASIC4.28□□□□□ -1.72
Shisa8J3QNX5 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Shisa8J3QNX5 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC4.28□□□□□ -1.72
Shisa8J3QNX5 Gm7825-201ENSMUST00000204046 416 ntBASIC4.28□□□□□ -1.72
Shisa8J3QNX5 Gm32453-201ENSMUST00000204183 456 ntBASIC4.28□□□□□ -1.72
Shisa8J3QNX5 Gm2522-201ENSMUST00000204280 322 ntBASIC4.28□□□□□ -1.72
Shisa8J3QNX5 Gm18468-201ENSMUST00000207321 369 ntBASIC4.28□□□□□ -1.72
Shisa8J3QNX5 Gm18470-201ENSMUST00000207467 420 ntBASIC4.28□□□□□ -1.72
Shisa8J3QNX5 Gm18465-201ENSMUST00000207468 369 ntBASIC4.28□□□□□ -1.72
Shisa8J3QNX5 Gm18464-201ENSMUST00000207803 420 ntBASIC4.28□□□□□ -1.72
Shisa8J3QNX5 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC4.28□□□□□ -1.72
Shisa8J3QNX5 Gm18458-201ENSMUST00000207908 369 ntBASIC4.28□□□□□ -1.72
Shisa8J3QNX5 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC4.28□□□□□ -1.72
Shisa8J3QNX5 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC4.28□□□□□ -1.72
Shisa8J3QNX5 Gm18461-201ENSMUST00000208421 420 ntBASIC4.28□□□□□ -1.72
Shisa8J3QNX5 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC4.28□□□□□ -1.72
Shisa8J3QNX5 Olfr790-204ENSMUST00000218901 1070 ntBASIC4.28□□□□□ -1.72
Shisa8J3QNX5 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC4.28□□□□□ -1.72
Shisa8J3QNX5 AC165283.1-201ENSMUST00000223390 307 ntBASIC4.28□□□□□ -1.72
Shisa8J3QNX5 AC130536.1-201ENSMUST00000224425 271 ntBASIC4.28□□□□□ -1.72
Shisa8J3QNX5 AC154329.2-201ENSMUST00000225257 383 ntBASIC4.28□□□□□ -1.72
Shisa8J3QNX5 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Shisa8J3QNX5 Rybp-ps-201ENSMUST00000069489 681 ntBASIC4.28□□□□□ -1.72
Shisa8J3QNX5 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Shisa8J3QNX5 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Shisa8J3QNX5 Gm6065-201ENSMUST00000081336 492 ntBASIC4.28□□□□□ -1.72
Shisa8J3QNX5 Gm25586-201ENSMUST00000082499 112 ntBASIC4.28□□□□□ -1.72
Shisa8J3QNX5 Gm23459-201ENSMUST00000083259 131 ntBASIC4.28□□□□□ -1.72
Shisa8J3QNX5 Gm23452-201ENSMUST00000083327 107 ntBASIC4.28□□□□□ -1.72
Shisa8J3QNX5 Vmn1r43-201ENSMUST00000089418 1069 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Shisa8J3QNX5 Gm10356-201ENSMUST00000097152 1258 ntBASIC4.28□□□□□ -1.72
Shisa8J3QNX5 Gm21286-201ENSMUST00000098035 545 ntBASIC4.28□□□□□ -1.72
Shisa8J3QNX5 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Shisa8J3QNX5 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Shisa8J3QNX5 Gm37527-201ENSMUST00000192406 3547 ntBASIC4.28□□□□□ -1.72
Shisa8J3QNX5 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Shisa8J3QNX5 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Shisa8J3QNX5 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Shisa8J3QNX5 Gm36927-201ENSMUST00000192504 1841 ntBASIC4.28□□□□□ -1.72
Shisa8J3QNX5 Olfr1500-202ENSMUST00000214475 2697 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.73
Shisa8J3QNX5 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.73
Shisa8J3QNX5 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
Shisa8J3QNX5 Gm7451-201ENSMUST00000208382 1392 ntBASIC4.27□□□□□ -1.73
Shisa8J3QNX5 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC4.27□□□□□ -1.73
Shisa8J3QNX5 Gm37831-201ENSMUST00000191685 1787 ntBASIC4.27□□□□□ -1.73
Shisa8J3QNX5 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Shisa8J3QNX5 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Shisa8J3QNX5 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
Shisa8J3QNX5 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Shisa8J3QNX5 Gm42721-201ENSMUST00000197165 1523 ntBASIC4.27□□□□□ -1.73
Shisa8J3QNX5 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Shisa8J3QNX5 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Shisa8J3QNX5 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Shisa8J3QNX5 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC4.27□□□□□ -1.73
Shisa8J3QNX5 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Shisa8J3QNX5 Gm15126-201ENSMUST00000118631 833 ntBASIC4.27□□□□□ -1.73
Shisa8J3QNX5 Gm12448-201ENSMUST00000118852 655 ntBASIC4.27□□□□□ -1.73
Shisa8J3QNX5 Gm11943-201ENSMUST00000119473 327 ntBASIC4.27□□□□□ -1.73
Shisa8J3QNX5 Gm12768-201ENSMUST00000120055 759 ntBASIC4.27□□□□□ -1.73
Shisa8J3QNX5 Gm12650-201ENSMUST00000121966 258 ntBASIC4.27□□□□□ -1.73
Shisa8J3QNX5 Defa-ps12-201ENSMUST00000122353 193 ntBASIC4.27□□□□□ -1.73
Shisa8J3QNX5 Gm23212-201ENSMUST00000122718 60 ntBASIC4.27□□□□□ -1.73
Shisa8J3QNX5 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Shisa8J3QNX5 Gm26347-201ENSMUST00000157526 131 ntBASIC4.27□□□□□ -1.73
Shisa8J3QNX5 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC4.27□□□□□ -1.73
Shisa8J3QNX5 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Shisa8J3QNX5 Trbv10-201ENSMUST00000168322 289 ntBASIC4.27□□□□□ -1.73
Shisa8J3QNX5 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC4.27□□□□□ -1.73
Shisa8J3QNX5 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
Shisa8J3QNX5 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC4.27□□□□□ -1.73
Shisa8J3QNX5 Gm27985-201ENSMUST00000185112 378 ntBASIC4.27□□□□□ -1.73
Shisa8J3QNX5 Gm28943-201ENSMUST00000186187 615 ntBASIC4.27□□□□□ -1.73
Shisa8J3QNX5 Gm28736-201ENSMUST00000186257 615 ntBASIC4.27□□□□□ -1.73
Shisa8J3QNX5 Gm29401-201ENSMUST00000186690 615 ntBASIC4.27□□□□□ -1.73
Shisa8J3QNX5 Gm29178-204ENSMUST00000186784 615 ntBASIC4.27□□□□□ -1.73
Shisa8J3QNX5 Gm28589-201ENSMUST00000186991 615 ntBASIC4.27□□□□□ -1.73
Shisa8J3QNX5 Gm28936-201ENSMUST00000187153 615 ntBASIC4.27□□□□□ -1.73
Shisa8J3QNX5 Gm29121-201ENSMUST00000187611 615 ntBASIC4.27□□□□□ -1.73
Shisa8J3QNX5 Gm28243-201ENSMUST00000187801 615 ntBASIC4.27□□□□□ -1.73
Shisa8J3QNX5 Gm28844-202ENSMUST00000187977 615 ntBASIC4.27□□□□□ -1.73
Shisa8J3QNX5 Gm29058-201ENSMUST00000189510 615 ntBASIC4.27□□□□□ -1.73
Shisa8J3QNX5 Gm29624-201ENSMUST00000190018 615 ntBASIC4.27□□□□□ -1.73
Shisa8J3QNX5 Gm28780-201ENSMUST00000190223 615 ntBASIC4.27□□□□□ -1.73
Shisa8J3QNX5 Gm28969-211ENSMUST00000190992 615 ntBASIC4.27□□□□□ -1.73
Shisa8J3QNX5 Gm28990-207ENSMUST00000191219 615 ntBASIC4.27□□□□□ -1.73
Shisa8J3QNX5 Trbv22-201ENSMUST00000191697 291 ntBASIC4.27□□□□□ -1.73
Shisa8J3QNX5 Gm36468-201ENSMUST00000192119 615 ntBASIC4.27□□□□□ -1.73
Shisa8J3QNX5 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC4.27□□□□□ -1.73
Shisa8J3QNX5 Gm31572-201ENSMUST00000193341 615 ntBASIC4.27□□□□□ -1.73
Shisa8J3QNX5 Gm30175-201ENSMUST00000194173 615 ntBASIC4.27□□□□□ -1.73
Shisa8J3QNX5 Gm30858-201ENSMUST00000195516 615 ntBASIC4.27□□□□□ -1.73
Shisa8J3QNX5 Gm43350-201ENSMUST00000196382 711 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms