Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 AC125543.3-201ENSMUST00000221991 126 ntBASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 AC122858.1-202ENSMUST00000228290 986 ntBASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Gm24622-201ENSMUST00000082619 162 ntBASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Gm37779-201ENSMUST00000194221 3380 ntBASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Gm11885-201ENSMUST00000118473 1428 ntBASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Gm29488-201ENSMUST00000191427 2402 ntBASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Gm37766-201ENSMUST00000192244 2567 ntBASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 Gm43718-201ENSMUST00000197524 1857 ntBASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 Gm26996-201ENSMUST00000204418 1359 ntBASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 Gm8980-201ENSMUST00000140232 2197 ntBASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 Mir700-201ENSMUST00000102169 79 ntBASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 Mir680-1-201ENSMUST00000102257 109 ntBASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 Mir759-201ENSMUST00000103254 98 ntBASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 Gm26156-201ENSMUST00000116999 123 ntBASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 Gm14711-201ENSMUST00000117056 217 ntBASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 Gm14771-201ENSMUST00000118249 203 ntBASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 Gm15034-201ENSMUST00000120043 349 ntBASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 Gm23430-201ENSMUST00000122490 314 ntBASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 Gm22492-201ENSMUST00000157192 297 ntBASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 Gm24737-201ENSMUST00000158861 100 ntBASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 Gm6486-201ENSMUST00000166202 434 ntBASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 Mir3473g-201ENSMUST00000183494 136 ntBASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 Gm37658-201ENSMUST00000192672 315 ntBASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 Ighv1-14-201ENSMUST00000194015 402 ntBASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 Gm37030-201ENSMUST00000194254 295 ntBASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 Gm37659-201ENSMUST00000194574 111 ntBASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 Gm44373-201ENSMUST00000196112 169 ntBASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 Gm18482-201ENSMUST00000202405 760 ntBASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 Gm45026-201ENSMUST00000205292 833 ntBASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 Gm18194-201ENSMUST00000210455 481 ntBASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 AC162387.1-201ENSMUST00000213369 213 ntBASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 AC123067.1-201ENSMUST00000217711 462 ntBASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 AC124445.1-201ENSMUST00000218613 452 ntBASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 AC160931.2-201ENSMUST00000221445 351 ntBASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 AC134917.2-201ENSMUST00000223354 124 ntBASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 AC167140.1-201ENSMUST00000224710 403 ntBASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 AL606513.1-201ENSMUST00000225369 579 ntBASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 AC159205.4-201ENSMUST00000225964 704 ntBASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 CT025157.1-201ENSMUST00000226241 292 ntBASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 AC166574.3-201ENSMUST00000226725 367 ntBASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 AC151831.1-201ENSMUST00000227609 4033 ntBASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 Gm38104-201ENSMUST00000195121 1895 ntBASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 AC120375.2-201ENSMUST00000226532 1853 ntBASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 Gm43175-201ENSMUST00000198450 3810 ntBASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Pcdh1F7BJK1 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 AC144772.1-201ENSMUST00000226372 2398 ntBASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms