Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm28594-201ENSMUST00000187022 661 ntBASIC4.43□□□□□ -1.7
H2afb3S4R1G7 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
H2afb3S4R1G7 Trbv22-201ENSMUST00000191697 291 ntBASIC4.43□□□□□ -1.7
H2afb3S4R1G7 Gm34176-201ENSMUST00000192621 474 ntBASIC4.43□□□□□ -1.7
H2afb3S4R1G7 BX530055.1-201ENSMUST00000197285 122 ntBASIC4.43□□□□□ -1.7
H2afb3S4R1G7 Gm43227-201ENSMUST00000202239 677 ntBASIC4.43□□□□□ -1.7
H2afb3S4R1G7 Gm44404-201ENSMUST00000203979 636 ntBASIC4.43□□□□□ -1.7
H2afb3S4R1G7 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC4.43□□□□□ -1.7
H2afb3S4R1G7 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
H2afb3S4R1G7 AC122332.1-201ENSMUST00000214384 285 ntBASIC4.43□□□□□ -1.7
H2afb3S4R1G7 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC4.43□□□□□ -1.7
H2afb3S4R1G7 AC156832.3-201ENSMUST00000215591 435 ntBASIC4.43□□□□□ -1.7
H2afb3S4R1G7 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
H2afb3S4R1G7 AC157017.1-201ENSMUST00000220148 364 ntBASIC4.43□□□□□ -1.7
H2afb3S4R1G7 AC120540.1-201ENSMUST00000221879 324 ntBASIC4.43□□□□□ -1.7
H2afb3S4R1G7 Gm19195-201ENSMUST00000222018 511 ntBASIC4.43□□□□□ -1.7
H2afb3S4R1G7 AC164116.1-201ENSMUST00000225810 622 ntBASIC4.43□□□□□ -1.7
H2afb3S4R1G7 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
H2afb3S4R1G7 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
H2afb3S4R1G7 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
H2afb3S4R1G7 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
H2afb3S4R1G7 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
H2afb3S4R1G7 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
H2afb3S4R1G7 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
H2afb3S4R1G7 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC4.43□□□□□ -1.7
H2afb3S4R1G7 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
H2afb3S4R1G7 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC4.43□□□□□ -1.7
H2afb3S4R1G7 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC4.43□□□□□ -1.7
H2afb3S4R1G7 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC4.43□□□□□ -1.7
H2afb3S4R1G7 AC165106.3-201ENSMUST00000228191 3843 ntBASIC4.43□□□□□ -1.7
H2afb3S4R1G7 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
H2afb3S4R1G7 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC4.43□□□□□ -1.7
H2afb3S4R1G7 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
H2afb3S4R1G7 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
H2afb3S4R1G7 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
H2afb3S4R1G7 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
H2afb3S4R1G7 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Gm45854-201ENSMUST00000211857 3488 ntBASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Gm26002-201ENSMUST00000101915 107 ntBASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
H2afb3S4R1G7 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Gm6664-201ENSMUST00000119138 468 ntBASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Gm11410-201ENSMUST00000120053 1143 ntBASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Gm11805-201ENSMUST00000121238 600 ntBASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC4.42□□□□□ -1.7
H2afb3S4R1G7 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Gm2182-201ENSMUST00000145243 663 ntBASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Gm23171-201ENSMUST00000157159 264 ntBASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Gm24931-201ENSMUST00000158324 107 ntBASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Gm26173-201ENSMUST00000158416 136 ntBASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Gm24734-201ENSMUST00000158860 262 ntBASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Gm26159-201ENSMUST00000158968 104 ntBASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Gm16589-201ENSMUST00000159522 918 ntBASIC4.42□□□□□ -1.7
H2afb3S4R1G7 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Gm18354-201ENSMUST00000173515 1068 ntBASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Gm22646-201ENSMUST00000175130 115 ntBASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Gm7438-201ENSMUST00000177664 639 ntBASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Gm7408-201ENSMUST00000178014 639 ntBASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Gm7386-201ENSMUST00000178020 639 ntBASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Gm3657-201ENSMUST00000178170 639 ntBASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Gm7415-201ENSMUST00000178205 639 ntBASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Gm7391-201ENSMUST00000178680 639 ntBASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Gm5974-201ENSMUST00000181607 986 ntBASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Gm29413-201ENSMUST00000186019 880 ntBASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Gm18802-201ENSMUST00000186270 888 ntBASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Gm6075-201ENSMUST00000186816 486 ntBASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Gm29639-201ENSMUST00000188375 580 ntBASIC4.42□□□□□ -1.7
H2afb3S4R1G7 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Ighv1-35-201ENSMUST00000195265 351 ntBASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Igkv12-49-201ENSMUST00000197714 278 ntBASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Gm43054-201ENSMUST00000199495 884 ntBASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Gm43171-201ENSMUST00000199882 291 ntBASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Gm45226-201ENSMUST00000206602 288 ntBASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC4.42□□□□□ -1.7
H2afb3S4R1G7 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
H2afb3S4R1G7 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Gm7530-201ENSMUST00000218466 605 ntBASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC4.42□□□□□ -1.7
H2afb3S4R1G7 CT572983.1-201ENSMUST00000226895 514 ntBASIC4.42□□□□□ -1.7
H2afb3S4R1G7 CT025548.1-201ENSMUST00000227459 257 ntBASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Gm16415-201ENSMUST00000080097 489 ntBASIC4.42□□□□□ -1.7
H2afb3S4R1G7 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms