Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Mir7008-201ENSMUST00000184398 63 ntBASIC4.8□□□□□ -1.64
Sec61a2Q9JLR1 Mir7037-201ENSMUST00000184414 65 ntBASIC4.8□□□□□ -1.64
Sec61a2Q9JLR1 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC4.8□□□□□ -1.64
Sec61a2Q9JLR1 Gm43070-201ENSMUST00000196938 415 ntBASIC4.8□□□□□ -1.64
Sec61a2Q9JLR1 Gm43444-201ENSMUST00000198123 291 ntBASIC4.8□□□□□ -1.64
Sec61a2Q9JLR1 Gm43794-201ENSMUST00000200971 692 ntBASIC4.8□□□□□ -1.64
Sec61a2Q9JLR1 Gm43026-201ENSMUST00000202972 325 ntBASIC4.8□□□□□ -1.64
Sec61a2Q9JLR1 Gm44149-201ENSMUST00000204256 226 ntBASIC4.8□□□□□ -1.64
Sec61a2Q9JLR1 Gm44923-201ENSMUST00000206673 85 ntBASIC4.8□□□□□ -1.64
Sec61a2Q9JLR1 Gm9202-201ENSMUST00000223036 437 ntBASIC4.8□□□□□ -1.64
Sec61a2Q9JLR1 AC174797.2-203ENSMUST00000224017 716 ntBASIC4.8□□□□□ -1.64
Sec61a2Q9JLR1 CT010486.1-201ENSMUST00000224609 422 ntBASIC4.8□□□□□ -1.64
Sec61a2Q9JLR1 AC137117.1-201ENSMUST00000226912 441 ntBASIC4.8□□□□□ -1.64
Sec61a2Q9JLR1 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Sec61a2Q9JLR1 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Sec61a2Q9JLR1 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Sec61a2Q9JLR1 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Sec61a2Q9JLR1 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Sec61a2Q9JLR1 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Sec61a2Q9JLR1 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Sec61a2Q9JLR1 Gm44248-201ENSMUST00000203079 1549 ntBASIC4.8□□□□□ -1.64
Sec61a2Q9JLR1 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Sec61a2Q9JLR1 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Sec61a2Q9JLR1 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC4.8□□□□□ -1.64
Sec61a2Q9JLR1 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Sec61a2Q9JLR1 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Sec61a2Q9JLR1 Gm44518-201ENSMUST00000208080 4370 ntBASIC4.8□□□□□ -1.64
Sec61a2Q9JLR1 Gm38375-201ENSMUST00000194610 2227 ntBASIC4.8□□□□□ -1.64
Sec61a2Q9JLR1 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Sec61a2Q9JLR1 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Sec61a2Q9JLR1 AC116726.1-201ENSMUST00000215028 3497 ntBASIC4.8□□□□□ -1.64
Sec61a2Q9JLR1 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Gm24230-201ENSMUST00000104313 129 ntBASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Gm25111-201ENSMUST00000116686 147 ntBASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Gm11386-201ENSMUST00000117761 347 ntBASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Gm3943-201ENSMUST00000118606 718 ntBASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Gm15988-201ENSMUST00000118677 367 ntBASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Gm14521-201ENSMUST00000119545 350 ntBASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Gm12515-201ENSMUST00000120116 361 ntBASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Gm14392-201ENSMUST00000120332 401 ntBASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Gm16100-201ENSMUST00000120489 231 ntBASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Gm2768-201ENSMUST00000121062 250 ntBASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Gm12936-201ENSMUST00000121439 301 ntBASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Gm14784-201ENSMUST00000121604 663 ntBASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Gm25430-201ENSMUST00000157614 289 ntBASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Gm24216-201ENSMUST00000158259 117 ntBASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Gm15812-201ENSMUST00000162331 748 ntBASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Gm24418-201ENSMUST00000177597 79 ntBASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Gm24639-201ENSMUST00000178518 79 ntBASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Gm23076-201ENSMUST00000179082 79 ntBASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Gm25077-201ENSMUST00000179157 79 ntBASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Gm28579-201ENSMUST00000186143 369 ntBASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Mir6516-201ENSMUST00000196236 110 ntBASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Gm33601-201ENSMUST00000210001 961 ntBASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 AC162931.1-201ENSMUST00000214184 267 ntBASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 AC183268.2-201ENSMUST00000214513 446 ntBASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 AC161609.1-201ENSMUST00000225878 474 ntBASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 AC154436.2-201ENSMUST00000227408 208 ntBASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 AC102291.2-201ENSMUST00000228083 367 ntBASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Snord59a-201ENSMUST00000082844 74 ntBASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Gm25682-201ENSMUST00000083942 164 ntBASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 n-R5s46-201ENSMUST00000083960 116 ntBASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 AC162910.1-201ENSMUST00000221219 1723 ntBASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Smc5-206ENSMUST00000226111 3265 ntBASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Sec61a2Q9JLR1 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 132 ms