Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC3.91□□□□□ -1.78
Upk3aQ9JKX8 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Upk3aQ9JKX8 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Upk3aQ9JKX8 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC3.91□□□□□ -1.78
Upk3aQ9JKX8 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Upk3aQ9JKX8 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Upk3aQ9JKX8 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC3.91□□□□□ -1.78
Upk3aQ9JKX8 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Upk3aQ9JKX8 Gm17777-201ENSMUST00000189740 1276 ntBASIC3.91□□□□□ -1.78
Upk3aQ9JKX8 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC3.91□□□□□ -1.78
Upk3aQ9JKX8 Gm43491-201ENSMUST00000197133 784 ntBASIC3.91□□□□□ -1.78
Upk3aQ9JKX8 2510017J16Rik-201ENSMUST00000198718 1263 ntBASIC3.91□□□□□ -1.78
Upk3aQ9JKX8 Gm43841-201ENSMUST00000199491 586 ntBASIC3.91□□□□□ -1.78
Upk3aQ9JKX8 Gm43894-201ENSMUST00000203274 688 ntBASIC3.91□□□□□ -1.78
Upk3aQ9JKX8 Gm44371-201ENSMUST00000204148 467 ntBASIC3.91□□□□□ -1.78
Upk3aQ9JKX8 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Upk3aQ9JKX8 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Upk3aQ9JKX8 Gm6303-201ENSMUST00000210123 471 ntBASIC3.91□□□□□ -1.78
Upk3aQ9JKX8 AC158641.1-201ENSMUST00000218933 229 ntBASIC3.91□□□□□ -1.78
Upk3aQ9JKX8 Gm46998-201ENSMUST00000221444 330 ntBASIC3.91□□□□□ -1.78
Upk3aQ9JKX8 AC164424.1-201ENSMUST00000221690 170 ntBASIC3.91□□□□□ -1.78
Upk3aQ9JKX8 AC124524.2-201ENSMUST00000223940 588 ntBASIC3.91□□□□□ -1.78
Upk3aQ9JKX8 AL672194.1-201ENSMUST00000224841 603 ntBASIC3.91□□□□□ -1.78
Upk3aQ9JKX8 AC119573.1-201ENSMUST00000227960 757 ntBASIC3.91□□□□□ -1.78
Upk3aQ9JKX8 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Upk3aQ9JKX8 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
Upk3aQ9JKX8 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Upk3aQ9JKX8 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
Upk3aQ9JKX8 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC3.91□□□□□ -1.78
Upk3aQ9JKX8 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Upk3aQ9JKX8 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC3.91□□□□□ -1.78
Upk3aQ9JKX8 Gm38010-201ENSMUST00000192592 2784 ntBASIC3.91□□□□□ -1.78
Upk3aQ9JKX8 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Upk3aQ9JKX8 Gm38269-201ENSMUST00000194549 3298 ntBASIC3.9□□□□□ -1.78
Upk3aQ9JKX8 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.78
Upk3aQ9JKX8 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.78
Upk3aQ9JKX8 Gm38065-201ENSMUST00000193147 3492 ntBASIC3.9□□□□□ -1.78
Upk3aQ9JKX8 Gm42968-201ENSMUST00000198578 1372 ntBASIC3.9□□□□□ -1.78
Upk3aQ9JKX8 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
Upk3aQ9JKX8 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Upk3aQ9JKX8 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC3.9□□□□□ -1.78
Upk3aQ9JKX8 Igkv11-106-201ENSMUST00000103331 346 ntBASIC3.9□□□□□ -1.79
Upk3aQ9JKX8 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Upk3aQ9JKX8 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
Upk3aQ9JKX8 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC3.9□□□□□ -1.79
Upk3aQ9JKX8 Gm11506-201ENSMUST00000122414 470 ntBASIC3.9□□□□□ -1.79
Upk3aQ9JKX8 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Upk3aQ9JKX8 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC3.9□□□□□ -1.79
Upk3aQ9JKX8 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Upk3aQ9JKX8 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Upk3aQ9JKX8 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
Upk3aQ9JKX8 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
Upk3aQ9JKX8 Gm28872-201ENSMUST00000191518 158 ntBASIC3.9□□□□□ -1.79
Upk3aQ9JKX8 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC3.9□□□□□ -1.79
Upk3aQ9JKX8 Gm43604-201ENSMUST00000199799 705 ntBASIC3.9□□□□□ -1.79
Upk3aQ9JKX8 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC3.9□□□□□ -1.79
Upk3aQ9JKX8 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Upk3aQ9JKX8 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC3.9□□□□□ -1.79
Upk3aQ9JKX8 Gm45474-201ENSMUST00000209471 408 ntBASIC3.9□□□□□ -1.79
Upk3aQ9JKX8 Gm8748-201ENSMUST00000211125 587 ntBASIC3.9□□□□□ -1.79
Upk3aQ9JKX8 Gm29774-201ENSMUST00000219270 436 ntBASIC3.9□□□□□ -1.79
Upk3aQ9JKX8 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Upk3aQ9JKX8 Gm31931-201ENSMUST00000219666 222 ntBASIC3.9□□□□□ -1.79
Upk3aQ9JKX8 CT009765.2-201ENSMUST00000221331 392 ntBASIC3.9□□□□□ -1.79
Upk3aQ9JKX8 AC122448.1-201ENSMUST00000226317 772 ntBASIC3.9□□□□□ -1.79
Upk3aQ9JKX8 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC3.9□□□□□ -1.79
Upk3aQ9JKX8 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Upk3aQ9JKX8 Gm6462-201ENSMUST00000081488 304 ntBASIC3.9□□□□□ -1.79
Upk3aQ9JKX8 Gm26072-201ENSMUST00000083135 107 ntBASIC3.9□□□□□ -1.79
Upk3aQ9JKX8 Mir28a-201ENSMUST00000083560 86 ntBASIC3.9□□□□□ -1.79
Upk3aQ9JKX8 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Upk3aQ9JKX8 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Upk3aQ9JKX8 Gm38240-201ENSMUST00000195110 2487 ntBASIC3.9□□□□□ -1.79
Upk3aQ9JKX8 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC3.9□□□□□ -1.79
Upk3aQ9JKX8 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Upk3aQ9JKX8 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Upk3aQ9JKX8 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Upk3aQ9JKX8 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC3.89□□□□□ -1.79
Upk3aQ9JKX8 AC156560.3-201ENSMUST00000222978 3841 ntBASIC3.89□□□□□ -1.79
Upk3aQ9JKX8 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Upk3aQ9JKX8 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Upk3aQ9JKX8 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
Upk3aQ9JKX8 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
Upk3aQ9JKX8 Mir551b-201ENSMUST00000102165 98 ntBASIC3.89□□□□□ -1.79
Upk3aQ9JKX8 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC3.89□□□□□ -1.79
Upk3aQ9JKX8 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC3.89□□□□□ -1.79
Upk3aQ9JKX8 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC3.89□□□□□ -1.79
Upk3aQ9JKX8 Snord66-201ENSMUST00000104051 75 ntBASIC3.89□□□□□ -1.79
Upk3aQ9JKX8 Gm23133-201ENSMUST00000104255 135 ntBASIC3.89□□□□□ -1.79
Upk3aQ9JKX8 Gm14352-201ENSMUST00000119250 449 ntBASIC3.89□□□□□ -1.79
Upk3aQ9JKX8 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC3.89□□□□□ -1.79
Upk3aQ9JKX8 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Upk3aQ9JKX8 Gm5263-201ENSMUST00000163646 601 ntBASIC3.89□□□□□ -1.79
Upk3aQ9JKX8 Mir3473f-201ENSMUST00000183743 136 ntBASIC3.89□□□□□ -1.79
Upk3aQ9JKX8 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC3.89□□□□□ -1.79
Upk3aQ9JKX8 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC3.89□□□□□ -1.79
Upk3aQ9JKX8 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC3.89□□□□□ -1.79
Upk3aQ9JKX8 n-TSaga9-201ENSMUST00000197675 107 ntBASIC3.89□□□□□ -1.79
Upk3aQ9JKX8 Gm22897-201ENSMUST00000197860 128 ntBASIC3.89□□□□□ -1.79
Upk3aQ9JKX8 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 90.9 ms