Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 Gm12641-201ENSMUST00000117874 985 ntBASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 Gm15357-201ENSMUST00000119160 285 ntBASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 Gm14046-201ENSMUST00000119389 509 ntBASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 Gm6587-201ENSMUST00000120219 613 ntBASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 Gm13537-201ENSMUST00000120467 267 ntBASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 Gm14360-201ENSMUST00000120670 393 ntBASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 Gm13092-201ENSMUST00000136346 260 ntBASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 Gm16588-201ENSMUST00000162889 355 ntBASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 Gm6486-201ENSMUST00000166202 434 ntBASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 Gm26731-201ENSMUST00000180683 543 ntBASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 Gm17916-202ENSMUST00000187634 1187 ntBASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 Gm37979-201ENSMUST00000193065 712 ntBASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 Gm37111-201ENSMUST00000193250 634 ntBASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 Gm37088-201ENSMUST00000193887 406 ntBASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 Gm43975-201ENSMUST00000203023 481 ntBASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 Gm45063-201ENSMUST00000203726 472 ntBASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 Gm45735-201ENSMUST00000212779 319 ntBASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 Gm18904-201ENSMUST00000218756 329 ntBASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 CT030184.1-201ENSMUST00000222393 416 ntBASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 CT956049.1-201ENSMUST00000225671 763 ntBASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 AC154627.3-201ENSMUST00000228441 334 ntBASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 Gm6757-201ENSMUST00000189810 1706 ntBASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 Gm7957-201ENSMUST00000207404 2602 ntBASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 Gm18180-201ENSMUST00000187562 1484 ntBASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Ddx56Q9D0R4 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC5.29□□□□□ -1.56
Ddx56Q9D0R4 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Ddx56Q9D0R4 AC112274.1-201ENSMUST00000218957 4274 ntBASIC5.29□□□□□ -1.56
Ddx56Q9D0R4 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Ddx56Q9D0R4 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Ddx56Q9D0R4 Gm37862-201ENSMUST00000193079 2533 ntBASIC5.29□□□□□ -1.56
Ddx56Q9D0R4 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Ddx56Q9D0R4 Gm23274-201ENSMUST00000104056 130 ntBASIC5.29□□□□□ -1.56
Ddx56Q9D0R4 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC5.29□□□□□ -1.56
Ddx56Q9D0R4 Gm13887-201ENSMUST00000119009 344 ntBASIC5.29□□□□□ -1.56
Ddx56Q9D0R4 Gm12994-201ENSMUST00000119601 447 ntBASIC5.29□□□□□ -1.56
Ddx56Q9D0R4 Gm16463-201ENSMUST00000120527 721 ntBASIC5.29□□□□□ -1.56
Ddx56Q9D0R4 Gm12358-201ENSMUST00000121842 520 ntBASIC5.29□□□□□ -1.56
Ddx56Q9D0R4 Gm7973-201ENSMUST00000122107 488 ntBASIC5.29□□□□□ -1.56
Ddx56Q9D0R4 Gm24628-201ENSMUST00000122761 289 ntBASIC5.29□□□□□ -1.56
Ddx56Q9D0R4 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC5.29□□□□□ -1.56
Ddx56Q9D0R4 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC5.29□□□□□ -1.56
Ddx56Q9D0R4 Gm16558-201ENSMUST00000163015 532 ntBASIC5.29□□□□□ -1.56
Ddx56Q9D0R4 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Ddx56Q9D0R4 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Ddx56Q9D0R4 Gm3851-201ENSMUST00000168653 318 ntBASIC5.29□□□□□ -1.56
Ddx56Q9D0R4 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC5.29□□□□□ -1.56
Ddx56Q9D0R4 Gm24949-201ENSMUST00000183609 215 ntBASIC5.29□□□□□ -1.56
Ddx56Q9D0R4 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC5.29□□□□□ -1.56
Ddx56Q9D0R4 Gm28385-201ENSMUST00000185671 292 ntBASIC5.29□□□□□ -1.56
Ddx56Q9D0R4 Gm37659-201ENSMUST00000194574 111 ntBASIC5.29□□□□□ -1.56
Ddx56Q9D0R4 Gm8458-201ENSMUST00000196658 819 ntBASIC5.29□□□□□ -1.56
Ddx56Q9D0R4 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC5.29□□□□□ -1.56
Ddx56Q9D0R4 Gm7838-201ENSMUST00000203221 1189 ntBASIC5.29□□□□□ -1.56
Ddx56Q9D0R4 Gm43945-201ENSMUST00000203595 754 ntBASIC5.29□□□□□ -1.56
Ddx56Q9D0R4 Gm18011-201ENSMUST00000203717 565 ntBASIC5.29□□□□□ -1.56
Ddx56Q9D0R4 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC5.29□□□□□ -1.56
Ddx56Q9D0R4 Gm3189-201ENSMUST00000205595 832 ntBASIC5.29□□□□□ -1.56
Ddx56Q9D0R4 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC5.29□□□□□ -1.56
Ddx56Q9D0R4 Gm20039-201ENSMUST00000210329 394 ntBASIC5.29□□□□□ -1.56
Ddx56Q9D0R4 Gm46136-201ENSMUST00000214730 565 ntBASIC5.29□□□□□ -1.56
Ddx56Q9D0R4 AC120394.1-201ENSMUST00000217153 351 ntBASIC5.29□□□□□ -1.56
Ddx56Q9D0R4 Gm9269-201ENSMUST00000221661 578 ntBASIC5.29□□□□□ -1.56
Ddx56Q9D0R4 AC154724.1-201ENSMUST00000225782 821 ntBASIC5.29□□□□□ -1.56
Ddx56Q9D0R4 AC192088.3-201ENSMUST00000227858 831 ntBASIC5.29□□□□□ -1.56
Ddx56Q9D0R4 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Ddx56Q9D0R4 Gm25187-201ENSMUST00000083906 133 ntBASIC5.29□□□□□ -1.56
Ddx56Q9D0R4 Olfr203-201ENSMUST00000089305 924 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms