Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Msh4Q99MT2 Gm3675-201ENSMUST00000175904 1653 ntBASIC4.61□□□□□ -1.67
Msh4Q99MT2 Gm43990-201ENSMUST00000203790 1691 ntBASIC4.61□□□□□ -1.67
Msh4Q99MT2 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Msh4Q99MT2 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC4.6□□□□□ -1.67
Msh4Q99MT2 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Msh4Q99MT2 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Msh4Q99MT2 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Msh4Q99MT2 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.6□□□□□ -1.67
Msh4Q99MT2 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Msh4Q99MT2 Gm37363-201ENSMUST00000192336 2233 ntBASIC4.6□□□□□ -1.67
Msh4Q99MT2 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Msh4Q99MT2 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC4.6□□□□□ -1.67
Msh4Q99MT2 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Msh4Q99MT2 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC4.6□□□□□ -1.67
Msh4Q99MT2 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Msh4Q99MT2 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC4.6□□□□□ -1.67
Msh4Q99MT2 Gm4596-201ENSMUST00000117197 442 ntBASIC4.6□□□□□ -1.67
Msh4Q99MT2 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC4.6□□□□□ -1.67
Msh4Q99MT2 Gm14677-201ENSMUST00000117866 486 ntBASIC4.6□□□□□ -1.67
Msh4Q99MT2 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC4.6□□□□□ -1.67
Msh4Q99MT2 Gm13379-201ENSMUST00000118053 621 ntBASIC4.6□□□□□ -1.67
Msh4Q99MT2 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC4.6□□□□□ -1.67
Msh4Q99MT2 Gm11991-201ENSMUST00000119652 1074 ntBASIC4.6□□□□□ -1.67
Msh4Q99MT2 Gm11407-201ENSMUST00000120362 1058 ntBASIC4.6□□□□□ -1.67
Msh4Q99MT2 Gm15387-201ENSMUST00000120421 648 ntBASIC4.6□□□□□ -1.67
Msh4Q99MT2 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Msh4Q99MT2 Gm16259-201ENSMUST00000145241 553 ntBASIC4.6□□□□□ -1.67
Msh4Q99MT2 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC4.6□□□□□ -1.67
Msh4Q99MT2 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC4.6□□□□□ -1.67
Msh4Q99MT2 Gm23046-201ENSMUST00000158369 284 ntBASIC4.6□□□□□ -1.67
Msh4Q99MT2 Gm25520-201ENSMUST00000158389 118 ntBASIC4.6□□□□□ -1.67
Msh4Q99MT2 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Msh4Q99MT2 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Msh4Q99MT2 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC4.6□□□□□ -1.67
Msh4Q99MT2 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC4.6□□□□□ -1.67
Msh4Q99MT2 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC4.6□□□□□ -1.67
Msh4Q99MT2 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC4.6□□□□□ -1.67
Msh4Q99MT2 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC4.6□□□□□ -1.67
Msh4Q99MT2 Gm2950-201ENSMUST00000185530 520 ntBASIC4.6□□□□□ -1.67
Msh4Q99MT2 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC4.6□□□□□ -1.67
Msh4Q99MT2 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Msh4Q99MT2 Gm29332-201ENSMUST00000190829 227 ntBASIC4.6□□□□□ -1.67
Msh4Q99MT2 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC4.6□□□□□ -1.67
Msh4Q99MT2 Gm37164-201ENSMUST00000192809 637 ntBASIC4.6□□□□□ -1.67
Msh4Q99MT2 Gm35212-201ENSMUST00000196672 606 ntBASIC4.6□□□□□ -1.67
Msh4Q99MT2 Gm42896-201ENSMUST00000201249 1113 ntBASIC4.6□□□□□ -1.67
Msh4Q99MT2 Gm44634-201ENSMUST00000206119 152 ntBASIC4.6□□□□□ -1.67
Msh4Q99MT2 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC4.6□□□□□ -1.67
Msh4Q99MT2 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Msh4Q99MT2 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Msh4Q99MT2 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC4.6□□□□□ -1.67
Msh4Q99MT2 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC4.6□□□□□ -1.67
Msh4Q99MT2 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Msh4Q99MT2 AL662807.1-201ENSMUST00000224183 126 ntBASIC4.6□□□□□ -1.67
Msh4Q99MT2 AC154623.1-201ENSMUST00000224348 805 ntBASIC4.6□□□□□ -1.67
Msh4Q99MT2 AC164597.2-201ENSMUST00000226738 603 ntBASIC4.6□□□□□ -1.67
Msh4Q99MT2 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC4.6□□□□□ -1.67
Msh4Q99MT2 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Msh4Q99MT2 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Msh4Q99MT2 Gm24166-201ENSMUST00000082724 135 ntBASIC4.6□□□□□ -1.67
Msh4Q99MT2 Mir421-201ENSMUST00000083575 76 ntBASIC4.6□□□□□ -1.67
Msh4Q99MT2 Gm5518-201ENSMUST00000084171 648 ntBASIC4.6□□□□□ -1.67
Msh4Q99MT2 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Msh4Q99MT2 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Msh4Q99MT2 Gm5925-201ENSMUST00000105016 1497 ntBASIC4.6□□□□□ -1.67
Msh4Q99MT2 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Msh4Q99MT2 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Msh4Q99MT2 Gm3563-201ENSMUST00000172963 1628 ntBASIC4.6□□□□□ -1.67
Msh4Q99MT2 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Msh4Q99MT2 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
Msh4Q99MT2 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC4.6□□□□□ -1.67
Msh4Q99MT2 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Msh4Q99MT2 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Msh4Q99MT2 Gm43648-201ENSMUST00000197775 2485 ntBASIC4.6□□□□□ -1.67
Msh4Q99MT2 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Msh4Q99MT2 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Msh4Q99MT2 Gm15560-201ENSMUST00000117107 643 ntBASIC4.59□□□□□ -1.67
Msh4Q99MT2 Gm6429-201ENSMUST00000117144 475 ntBASIC4.59□□□□□ -1.67
Msh4Q99MT2 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC4.59□□□□□ -1.67
Msh4Q99MT2 Gm14506-201ENSMUST00000121165 536 ntBASIC4.59□□□□□ -1.67
Msh4Q99MT2 Gm13132-201ENSMUST00000121194 472 ntBASIC4.59□□□□□ -1.67
Msh4Q99MT2 Gm24628-201ENSMUST00000122761 289 ntBASIC4.59□□□□□ -1.67
Msh4Q99MT2 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC4.59□□□□□ -1.67
Msh4Q99MT2 Gm17131-201ENSMUST00000164420 3846 ntBASIC4.59□□□□□ -1.67
Msh4Q99MT2 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Msh4Q99MT2 Gm8161-201ENSMUST00000168739 481 ntBASIC4.59□□□□□ -1.67
Msh4Q99MT2 Gm17152-201ENSMUST00000172430 535 ntBASIC4.59□□□□□ -1.67
Msh4Q99MT2 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Msh4Q99MT2 S100a11-ps-201ENSMUST00000181735 306 ntBASIC4.59□□□□□ -1.67
Msh4Q99MT2 Gm27342-201ENSMUST00000183530 109 ntBASIC4.59□□□□□ -1.67
Msh4Q99MT2 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Msh4Q99MT2 Gm28385-201ENSMUST00000185671 292 ntBASIC4.59□□□□□ -1.67
Msh4Q99MT2 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Msh4Q99MT2 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
Msh4Q99MT2 Gm29107-201ENSMUST00000190910 347 ntBASIC4.59□□□□□ -1.67
Msh4Q99MT2 Vmn1r82-202ENSMUST00000191002 918 ntBASIC4.59□□□□□ -1.67
Msh4Q99MT2 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC4.59□□□□□ -1.67
Msh4Q99MT2 Ighv1-41-201ENSMUST00000194414 329 ntBASIC4.59□□□□□ -1.67
Msh4Q99MT2 AC136146.1-201ENSMUST00000196180 91 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms