Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Gm43527-201ENSMUST00000198749 3178 ntBASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Gm26019-201ENSMUST00000104407 119 ntBASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Gm11432-201ENSMUST00000117334 231 ntBASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Gm15670-201ENSMUST00000117740 447 ntBASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Clec2f-201ENSMUST00000121051 374 ntBASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Gm11909-201ENSMUST00000121424 759 ntBASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Gm11965-201ENSMUST00000122017 277 ntBASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Gm25120-201ENSMUST00000180148 79 ntBASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Gm8669-201ENSMUST00000183839 945 ntBASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Gm29031-201ENSMUST00000185316 614 ntBASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Gm29000-201ENSMUST00000185444 614 ntBASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Gm28204-201ENSMUST00000185934 614 ntBASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Gm28290-201ENSMUST00000186505 614 ntBASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Gm28161-201ENSMUST00000186669 614 ntBASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Gm19503-201ENSMUST00000187109 241 ntBASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Gm20954-201ENSMUST00000189078 644 ntBASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Gm28749-209ENSMUST00000189599 614 ntBASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Gm33163-201ENSMUST00000194504 614 ntBASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Gm36986-201ENSMUST00000195320 353 ntBASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Gm38008-201ENSMUST00000195333 518 ntBASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Gm5309-201ENSMUST00000197416 677 ntBASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Gm18944-201ENSMUST00000207672 643 ntBASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Gm18127-201ENSMUST00000208479 725 ntBASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Gm45689-201ENSMUST00000210522 133 ntBASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Gm8748-201ENSMUST00000211125 587 ntBASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Gm46190-201ENSMUST00000219650 427 ntBASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Gm36501-201ENSMUST00000221857 745 ntBASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 AC125543.1-201ENSMUST00000222778 101 ntBASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 AC156574.2-201ENSMUST00000228023 282 ntBASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Mir31-201ENSMUST00000083474 106 ntBASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
Ccdc28bQ8CEG5 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Ccdc28bQ8CEG5 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Ccdc28bQ8CEG5 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
Ccdc28bQ8CEG5 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Ccdc28bQ8CEG5 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC4.17□□□□□ -1.74
Ccdc28bQ8CEG5 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Ccdc28bQ8CEG5 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC4.17□□□□□ -1.74
Ccdc28bQ8CEG5 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC4.17□□□□□ -1.74
Ccdc28bQ8CEG5 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
Ccdc28bQ8CEG5 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC4.17□□□□□ -1.74
Ccdc28bQ8CEG5 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC4.17□□□□□ -1.74
Ccdc28bQ8CEG5 Gm22817-201ENSMUST00000157448 356 ntBASIC4.17□□□□□ -1.74
Ccdc28bQ8CEG5 Gm23387-201ENSMUST00000158586 107 ntBASIC4.17□□□□□ -1.74
Ccdc28bQ8CEG5 Gm3091-201ENSMUST00000163408 484 ntBASIC4.17□□□□□ -1.74
Ccdc28bQ8CEG5 Gm2966-201ENSMUST00000166052 481 ntBASIC4.17□□□□□ -1.74
Ccdc28bQ8CEG5 Gm17204-201ENSMUST00000167936 478 ntBASIC4.17□□□□□ -1.74
Ccdc28bQ8CEG5 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC4.17□□□□□ -1.74
Ccdc28bQ8CEG5 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC4.17□□□□□ -1.74
Ccdc28bQ8CEG5 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Ccdc28bQ8CEG5 Gm20574-201ENSMUST00000182867 917 ntBASIC4.17□□□□□ -1.74
Ccdc28bQ8CEG5 Gm27033-201ENSMUST00000183226 544 ntBASIC4.17□□□□□ -1.74
Ccdc28bQ8CEG5 Gm28385-201ENSMUST00000185671 292 ntBASIC4.17□□□□□ -1.74
Ccdc28bQ8CEG5 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC4.17□□□□□ -1.74
Ccdc28bQ8CEG5 Gm29281-201ENSMUST00000188077 381 ntBASIC4.17□□□□□ -1.74
Ccdc28bQ8CEG5 Gm3496-201ENSMUST00000188283 745 ntBASIC4.17□□□□□ -1.74
Ccdc28bQ8CEG5 Gm5252-201ENSMUST00000189030 909 ntBASIC4.17□□□□□ -1.74
Ccdc28bQ8CEG5 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC4.17□□□□□ -1.74
Ccdc28bQ8CEG5 Gm19280-201ENSMUST00000190191 205 ntBASIC4.17□□□□□ -1.74
Ccdc28bQ8CEG5 Gm29516-201ENSMUST00000190402 468 ntBASIC4.17□□□□□ -1.74
Ccdc28bQ8CEG5 Gm36997-201ENSMUST00000195090 707 ntBASIC4.17□□□□□ -1.74
Ccdc28bQ8CEG5 Gm37989-201ENSMUST00000195202 803 ntBASIC4.17□□□□□ -1.74
Ccdc28bQ8CEG5 Gm38154-201ENSMUST00000195444 340 ntBASIC4.17□□□□□ -1.74
Ccdc28bQ8CEG5 Gm38088-201ENSMUST00000195829 241 ntBASIC4.17□□□□□ -1.74
Ccdc28bQ8CEG5 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC4.17□□□□□ -1.74
Ccdc28bQ8CEG5 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC4.17□□□□□ -1.74
Ccdc28bQ8CEG5 Gm44972-201ENSMUST00000206419 406 ntBASIC4.17□□□□□ -1.74
Ccdc28bQ8CEG5 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC4.17□□□□□ -1.74
Ccdc28bQ8CEG5 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC4.17□□□□□ -1.74
Ccdc28bQ8CEG5 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC4.17□□□□□ -1.74
Ccdc28bQ8CEG5 Gm4057-201ENSMUST00000221407 368 ntBASIC4.17□□□□□ -1.74
Ccdc28bQ8CEG5 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC4.17□□□□□ -1.74
Ccdc28bQ8CEG5 AC150560.2-201ENSMUST00000227208 171 ntBASIC4.17□□□□□ -1.74
Ccdc28bQ8CEG5 Gm6863-201ENSMUST00000052882 636 ntBASIC4.17□□□□□ -1.74
Ccdc28bQ8CEG5 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Ccdc28bQ8CEG5 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 100.5 ms