Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm14624-201ENSMUST00000117746 192 ntBASIC5.12□□□□□ -1.59
Trim9Q8C7M3 Gm13751-201ENSMUST00000120280 752 ntBASIC5.12□□□□□ -1.59
Trim9Q8C7M3 Gm6568-201ENSMUST00000122274 697 ntBASIC5.12□□□□□ -1.59
Trim9Q8C7M3 Gm24689-201ENSMUST00000157760 104 ntBASIC5.12□□□□□ -1.59
Trim9Q8C7M3 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC5.12□□□□□ -1.59
Trim9Q8C7M3 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Trim9Q8C7M3 Gm7346-201ENSMUST00000169661 476 ntBASIC5.12□□□□□ -1.59
Trim9Q8C7M3 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Trim9Q8C7M3 Gm24561-201ENSMUST00000175182 95 ntBASIC5.12□□□□□ -1.59
Trim9Q8C7M3 Gm25019-201ENSMUST00000179732 110 ntBASIC5.12□□□□□ -1.59
Trim9Q8C7M3 Gm27964-201ENSMUST00000185195 62 ntBASIC5.12□□□□□ -1.59
Trim9Q8C7M3 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC5.12□□□□□ -1.59
Trim9Q8C7M3 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Trim9Q8C7M3 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC5.12□□□□□ -1.59
Trim9Q8C7M3 Gm36998-201ENSMUST00000193205 704 ntBASIC5.12□□□□□ -1.59
Trim9Q8C7M3 Gm7897-201ENSMUST00000193981 554 ntBASIC5.12□□□□□ -1.59
Trim9Q8C7M3 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC5.12□□□□□ -1.59
Trim9Q8C7M3 Gm44523-201ENSMUST00000205616 417 ntBASIC5.12□□□□□ -1.59
Trim9Q8C7M3 Gm8911-201ENSMUST00000213986 652 ntBASIC5.12□□□□□ -1.59
Trim9Q8C7M3 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC5.12□□□□□ -1.59
Trim9Q8C7M3 AC158807.1-201ENSMUST00000217959 187 ntBASIC5.12□□□□□ -1.59
Trim9Q8C7M3 AC211878.2-201ENSMUST00000222486 488 ntBASIC5.12□□□□□ -1.59
Trim9Q8C7M3 AC129935.1-201ENSMUST00000226302 873 ntBASIC5.12□□□□□ -1.59
Trim9Q8C7M3 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Trim9Q8C7M3 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Trim9Q8C7M3 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Trim9Q8C7M3 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Trim9Q8C7M3 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
Trim9Q8C7M3 Gm38020-201ENSMUST00000193066 4676 ntBASIC5.12□□□□□ -1.59
Trim9Q8C7M3 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Trim9Q8C7M3 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
Trim9Q8C7M3 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Trim9Q8C7M3 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Trim9Q8C7M3 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC5.12□□□□□ -1.59
Trim9Q8C7M3 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Trim9Q8C7M3 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
Trim9Q8C7M3 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Trim9Q8C7M3 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Trim9Q8C7M3 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC5.11□□□□□ -1.59
Trim9Q8C7M3 Dbpht2-202ENSMUST00000221311 5341 ntBASIC5.11□□□□□ -1.59
Trim9Q8C7M3 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Trim9Q8C7M3 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Trim9Q8C7M3 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Trim9Q8C7M3 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC5.11□□□□□ -1.59
Trim9Q8C7M3 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Trim9Q8C7M3 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC5.11□□□□□ -1.59
Trim9Q8C7M3 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Trim9Q8C7M3 Gm23594-201ENSMUST00000104307 134 ntBASIC5.11□□□□□ -1.59
Trim9Q8C7M3 Gm22020-201ENSMUST00000104358 136 ntBASIC5.11□□□□□ -1.59
Trim9Q8C7M3 Gm12683-201ENSMUST00000117528 415 ntBASIC5.11□□□□□ -1.59
Trim9Q8C7M3 Gm12062-201ENSMUST00000117533 259 ntBASIC5.11□□□□□ -1.59
Trim9Q8C7M3 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Trim9Q8C7M3 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Trim9Q8C7M3 Gm22312-201ENSMUST00000158005 130 ntBASIC5.11□□□□□ -1.59
Trim9Q8C7M3 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
Trim9Q8C7M3 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC5.11□□□□□ -1.59
Trim9Q8C7M3 Gm22252-201ENSMUST00000179316 79 ntBASIC5.11□□□□□ -1.59
Trim9Q8C7M3 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Trim9Q8C7M3 Gm27522-201ENSMUST00000183949 230 ntBASIC5.11□□□□□ -1.59
Trim9Q8C7M3 Mir7j-201ENSMUST00000184427 122 ntBASIC5.11□□□□□ -1.59
Trim9Q8C7M3 Gm27538-201ENSMUST00000185065 294 ntBASIC5.11□□□□□ -1.59
Trim9Q8C7M3 Gm28655-201ENSMUST00000191538 692 ntBASIC5.11□□□□□ -1.59
Trim9Q8C7M3 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC5.11□□□□□ -1.59
Trim9Q8C7M3 Gm37550-201ENSMUST00000193230 463 ntBASIC5.11□□□□□ -1.59
Trim9Q8C7M3 Gm37095-201ENSMUST00000195421 205 ntBASIC5.11□□□□□ -1.59
Trim9Q8C7M3 Gm43237-201ENSMUST00000196835 1044 ntBASIC5.11□□□□□ -1.59
Trim9Q8C7M3 Gm9236-201ENSMUST00000196892 587 ntBASIC5.11□□□□□ -1.59
Trim9Q8C7M3 Gm43309-201ENSMUST00000200837 458 ntBASIC5.11□□□□□ -1.59
Trim9Q8C7M3 Gm3148-201ENSMUST00000203594 612 ntBASIC5.11□□□□□ -1.59
Trim9Q8C7M3 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Trim9Q8C7M3 Gm6171-201ENSMUST00000220760 645 ntBASIC5.11□□□□□ -1.59
Trim9Q8C7M3 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC5.11□□□□□ -1.59
Trim9Q8C7M3 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC5.11□□□□□ -1.59
Trim9Q8C7M3 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Trim9Q8C7M3 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Trim9Q8C7M3 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Trim9Q8C7M3 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Trim9Q8C7M3 Gm24921-201ENSMUST00000083024 107 ntBASIC5.11□□□□□ -1.59
Trim9Q8C7M3 Vmn1r43-201ENSMUST00000089418 1069 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Trim9Q8C7M3 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Trim9Q8C7M3 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Trim9Q8C7M3 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Trim9Q8C7M3 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Trim9Q8C7M3 Gm42967-201ENSMUST00000198647 2312 ntBASIC5.11□□□□□ -1.59
Trim9Q8C7M3 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Trim9Q8C7M3 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC5.1□□□□□ -1.59
Trim9Q8C7M3 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Trim9Q8C7M3 Gm24578-201ENSMUST00000103970 129 ntBASIC5.1□□□□□ -1.59
Trim9Q8C7M3 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Trim9Q8C7M3 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC5.1□□□□□ -1.59
Trim9Q8C7M3 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC5.1□□□□□ -1.59
Trim9Q8C7M3 Gm13477-201ENSMUST00000121620 2687 ntBASIC5.1□□□□□ -1.59
Trim9Q8C7M3 Gm15141-201ENSMUST00000121860 729 ntBASIC5.1□□□□□ -1.59
Trim9Q8C7M3 Gm23885-201ENSMUST00000122682 294 ntBASIC5.1□□□□□ -1.59
Trim9Q8C7M3 Gm24444-201ENSMUST00000157244 308 ntBASIC5.1□□□□□ -1.59
Trim9Q8C7M3 Gm23496-201ENSMUST00000157741 248 ntBASIC5.1□□□□□ -1.59
Trim9Q8C7M3 Gm24724-201ENSMUST00000158230 107 ntBASIC5.1□□□□□ -1.59
Trim9Q8C7M3 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Trim9Q8C7M3 Gm3053-201ENSMUST00000161709 616 ntBASIC5.1□□□□□ -1.59
Trim9Q8C7M3 Gm10074-201ENSMUST00000174543 249 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms