Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm22322-201ENSMUST00000157151 111 ntBASIC3.37□□□□□ -1.87
Col6a6Q8C6K9 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC3.37□□□□□ -1.87
Col6a6Q8C6K9 Gm20693-201ENSMUST00000177431 211 ntBASIC3.37□□□□□ -1.87
Col6a6Q8C6K9 Mir6914-201ENSMUST00000184999 69 ntBASIC3.37□□□□□ -1.87
Col6a6Q8C6K9 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC3.37□□□□□ -1.87
Col6a6Q8C6K9 AC158807.1-201ENSMUST00000217959 187 ntBASIC3.37□□□□□ -1.87
Col6a6Q8C6K9 AC118006.2-201ENSMUST00000224167 962 ntBASIC3.37□□□□□ -1.87
Col6a6Q8C6K9 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Col6a6Q8C6K9 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Col6a6Q8C6K9 Snord59a-201ENSMUST00000082844 74 ntBASIC3.37□□□□□ -1.87
Col6a6Q8C6K9 Gm43588-201ENSMUST00000201862 2298 ntBASIC3.37□□□□□ -1.87
Col6a6Q8C6K9 Gm44800-201ENSMUST00000207510 1855 ntBASIC3.37□□□□□ -1.87
Col6a6Q8C6K9 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
Col6a6Q8C6K9 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC3.37□□□□□ -1.87
Col6a6Q8C6K9 AC153150.1-201ENSMUST00000226065 3782 ntBASIC3.37□□□□□ -1.87
Col6a6Q8C6K9 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Col6a6Q8C6K9 Gm12902-201ENSMUST00000118389 322 ntBASIC3.37□□□□□ -1.87
Col6a6Q8C6K9 Gm11708-201ENSMUST00000119530 832 ntBASIC3.37□□□□□ -1.87
Col6a6Q8C6K9 Gm12577-201ENSMUST00000119701 574 ntBASIC3.37□□□□□ -1.87
Col6a6Q8C6K9 Gm5060-201ENSMUST00000120072 599 ntBASIC3.37□□□□□ -1.87
Col6a6Q8C6K9 Gm15780-201ENSMUST00000121283 935 ntBASIC3.37□□□□□ -1.87
Col6a6Q8C6K9 Gm15986-201ENSMUST00000122153 400 ntBASIC3.37□□□□□ -1.87
Col6a6Q8C6K9 n-R5s201-201ENSMUST00000122622 116 ntBASIC3.37□□□□□ -1.87
Col6a6Q8C6K9 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC3.37□□□□□ -1.87
Col6a6Q8C6K9 Gm27903-201ENSMUST00000175482 126 ntBASIC3.37□□□□□ -1.87
Col6a6Q8C6K9 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC3.37□□□□□ -1.87
Col6a6Q8C6K9 Gm29104-201ENSMUST00000186304 222 ntBASIC3.37□□□□□ -1.87
Col6a6Q8C6K9 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC3.37□□□□□ -1.87
Col6a6Q8C6K9 Gm29747-201ENSMUST00000194764 585 ntBASIC3.37□□□□□ -1.87
Col6a6Q8C6K9 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
Col6a6Q8C6K9 Gm44393-201ENSMUST00000197418 138 ntBASIC3.37□□□□□ -1.87
Col6a6Q8C6K9 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.37□□□□□ -1.87
Col6a6Q8C6K9 Gm25800-201ENSMUST00000082636 134 ntBASIC3.37□□□□□ -1.87
Col6a6Q8C6K9 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Col6a6Q8C6K9 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC3.37□□□□□ -1.87
Col6a6Q8C6K9 Gm37204-201ENSMUST00000192389 3961 ntBASIC3.37□□□□□ -1.87
Col6a6Q8C6K9 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC3.36□□□□□ -1.87
Col6a6Q8C6K9 Gm42772-201ENSMUST00000199945 3041 ntBASIC3.36□□□□□ -1.87
Col6a6Q8C6K9 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Col6a6Q8C6K9 Gm37588-201ENSMUST00000195024 2496 ntBASIC3.36□□□□□ -1.87
Col6a6Q8C6K9 Gm37781-201ENSMUST00000194773 3218 ntBASIC3.36□□□□□ -1.87
Col6a6Q8C6K9 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Col6a6Q8C6K9 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Col6a6Q8C6K9 Gm12571-201ENSMUST00000118132 243 ntBASIC3.36□□□□□ -1.87
Col6a6Q8C6K9 Gm14240-201ENSMUST00000120353 546 ntBASIC3.36□□□□□ -1.87
Col6a6Q8C6K9 Gm7281-201ENSMUST00000160010 543 ntBASIC3.36□□□□□ -1.87
Col6a6Q8C6K9 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC3.36□□□□□ -1.87
Col6a6Q8C6K9 Gm27254-201ENSMUST00000183926 517 ntBASIC3.36□□□□□ -1.87
Col6a6Q8C6K9 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Col6a6Q8C6K9 Gm37085-201ENSMUST00000193780 196 ntBASIC3.36□□□□□ -1.87
Col6a6Q8C6K9 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Col6a6Q8C6K9 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC3.36□□□□□ -1.87
Col6a6Q8C6K9 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC3.36□□□□□ -1.87
Col6a6Q8C6K9 AC119573.1-201ENSMUST00000227960 757 ntBASIC3.36□□□□□ -1.87
Col6a6Q8C6K9 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
Col6a6Q8C6K9 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Col6a6Q8C6K9 Gm45804-201ENSMUST00000212137 3435 ntBASIC3.36□□□□□ -1.87
Col6a6Q8C6K9 Gm42520-201ENSMUST00000199642 1502 ntBASIC3.36□□□□□ -1.87
Col6a6Q8C6K9 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC3.36□□□□□ -1.87
Col6a6Q8C6K9 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
Col6a6Q8C6K9 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC3.36□□□□□ -1.87
Col6a6Q8C6K9 Gm24118-201ENSMUST00000103972 126 ntBASIC3.36□□□□□ -1.87
Col6a6Q8C6K9 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC3.36□□□□□ -1.87
Col6a6Q8C6K9 Gm12268-201ENSMUST00000118398 442 ntBASIC3.36□□□□□ -1.87
Col6a6Q8C6K9 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC3.36□□□□□ -1.87
Col6a6Q8C6K9 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Col6a6Q8C6K9 Gm26373-201ENSMUST00000157833 103 ntBASIC3.36□□□□□ -1.87
Col6a6Q8C6K9 Gm9722-201ENSMUST00000194568 802 ntBASIC3.36□□□□□ -1.87
Col6a6Q8C6K9 Gm45157-201ENSMUST00000208729 401 ntBASIC3.36□□□□□ -1.87
Col6a6Q8C6K9 Gm45327-201ENSMUST00000211612 565 ntBASIC3.36□□□□□ -1.87
Col6a6Q8C6K9 AC154374.1-201ENSMUST00000215351 351 ntBASIC3.36□□□□□ -1.87
Col6a6Q8C6K9 AC161256.1-201ENSMUST00000217312 213 ntBASIC3.36□□□□□ -1.87
Col6a6Q8C6K9 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC3.36□□□□□ -1.87
Col6a6Q8C6K9 Gm4928-201ENSMUST00000219622 850 ntBASIC3.36□□□□□ -1.87
Col6a6Q8C6K9 AC154738.2-201ENSMUST00000227403 1110 ntBASIC3.36□□□□□ -1.87
Col6a6Q8C6K9 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Col6a6Q8C6K9 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Col6a6Q8C6K9 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Col6a6Q8C6K9 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Col6a6Q8C6K9 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Col6a6Q8C6K9 Gm10145-201ENSMUST00000077776 462 ntBASIC3.36□□□□□ -1.87
Col6a6Q8C6K9 Gm43923-201ENSMUST00000203992 2911 ntBASIC3.36□□□□□ -1.87
Col6a6Q8C6K9 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Col6a6Q8C6K9 Gm43881-201ENSMUST00000203051 2530 ntBASIC3.36□□□□□ -1.87
Col6a6Q8C6K9 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
Col6a6Q8C6K9 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Col6a6Q8C6K9 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Col6a6Q8C6K9 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Col6a6Q8C6K9 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Col6a6Q8C6K9 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Col6a6Q8C6K9 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.35□□□□□ -1.87
Col6a6Q8C6K9 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Col6a6Q8C6K9 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC3.35□□□□□ -1.87
Col6a6Q8C6K9 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Col6a6Q8C6K9 Gm26088-201ENSMUST00000157896 131 ntBASIC3.35□□□□□ -1.87
Col6a6Q8C6K9 Gm22968-201ENSMUST00000157955 118 ntBASIC3.35□□□□□ -1.87
Col6a6Q8C6K9 Gm3470-201ENSMUST00000160819 420 ntBASIC3.35□□□□□ -1.87
Col6a6Q8C6K9 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Col6a6Q8C6K9 Gm18306-201ENSMUST00000207338 569 ntBASIC3.35□□□□□ -1.87
Col6a6Q8C6K9 AL672194.1-201ENSMUST00000224841 603 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms