Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 AC130661.1-201ENSMUST00000218248 1680 ntBASIC6.49□□□□□ -1.37
Trim47Q8C0E3 Gm42541-201ENSMUST00000199871 2249 ntBASIC6.49□□□□□ -1.37
Trim47Q8C0E3 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim47Q8C0E3 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Trim47Q8C0E3 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC6.49□□□□□ -1.37
Trim47Q8C0E3 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Trim47Q8C0E3 Gm22194-201ENSMUST00000116869 95 ntBASIC6.49□□□□□ -1.37
Trim47Q8C0E3 Mir466j-201ENSMUST00000116876 122 ntBASIC6.49□□□□□ -1.37
Trim47Q8C0E3 Mir466i-201ENSMUST00000116924 121 ntBASIC6.49□□□□□ -1.37
Trim47Q8C0E3 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC6.49□□□□□ -1.37
Trim47Q8C0E3 Gm8424-201ENSMUST00000117716 988 ntBASIC6.49□□□□□ -1.37
Trim47Q8C0E3 Gm14815-201ENSMUST00000120060 488 ntBASIC6.49□□□□□ -1.37
Trim47Q8C0E3 Gm23837-201ENSMUST00000122656 286 ntBASIC6.49□□□□□ -1.37
Trim47Q8C0E3 Gm6956-201ENSMUST00000134724 546 ntBASIC6.49□□□□□ -1.37
Trim47Q8C0E3 Gm24731-201ENSMUST00000158227 131 ntBASIC6.49□□□□□ -1.37
Trim47Q8C0E3 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Trim47Q8C0E3 Gm28604-201ENSMUST00000186629 484 ntBASIC6.49□□□□□ -1.37
Trim47Q8C0E3 Gm28566-201ENSMUST00000186714 484 ntBASIC6.49□□□□□ -1.37
Trim47Q8C0E3 Gm28194-201ENSMUST00000187412 484 ntBASIC6.49□□□□□ -1.37
Trim47Q8C0E3 Gm28886-202ENSMUST00000187889 484 ntBASIC6.49□□□□□ -1.37
Trim47Q8C0E3 Gm28554-202ENSMUST00000189175 484 ntBASIC6.49□□□□□ -1.37
Trim47Q8C0E3 Gm29213-202ENSMUST00000189703 484 ntBASIC6.49□□□□□ -1.37
Trim47Q8C0E3 Gm28851-202ENSMUST00000189757 484 ntBASIC6.49□□□□□ -1.37
Trim47Q8C0E3 Gm28461-201ENSMUST00000190023 484 ntBASIC6.49□□□□□ -1.37
Trim47Q8C0E3 Igkv11-114-201ENSMUST00000200013 346 ntBASIC6.49□□□□□ -1.37
Trim47Q8C0E3 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC6.49□□□□□ -1.37
Trim47Q8C0E3 Gm44336-201ENSMUST00000203696 468 ntBASIC6.49□□□□□ -1.37
Trim47Q8C0E3 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC6.49□□□□□ -1.37
Trim47Q8C0E3 Gm45023-201ENSMUST00000207951 379 ntBASIC6.49□□□□□ -1.37
Trim47Q8C0E3 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC6.49□□□□□ -1.37
Trim47Q8C0E3 Gm45439-201ENSMUST00000211723 359 ntBASIC6.49□□□□□ -1.37
Trim47Q8C0E3 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
Trim47Q8C0E3 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Trim47Q8C0E3 Gm7198-201ENSMUST00000219635 1074 ntBASIC6.49□□□□□ -1.37
Trim47Q8C0E3 AC127242.4-201ENSMUST00000221242 470 ntBASIC6.49□□□□□ -1.37
Trim47Q8C0E3 AC161586.1-201ENSMUST00000223232 547 ntBASIC6.49□□□□□ -1.37
Trim47Q8C0E3 AC159256.1-201ENSMUST00000224298 1039 ntBASIC6.49□□□□□ -1.37
Trim47Q8C0E3 AC165092.4-201ENSMUST00000225025 679 ntBASIC6.49□□□□□ -1.37
Trim47Q8C0E3 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Trim47Q8C0E3 Gm28320-201ENSMUST00000187777 2273 ntBASIC6.49□□□□□ -1.37
Trim47Q8C0E3 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim47Q8C0E3 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC6.49□□□□□ -1.37
Trim47Q8C0E3 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim47Q8C0E3 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
Trim47Q8C0E3 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim47Q8C0E3 Gm37482-201ENSMUST00000194899 2791 ntBASIC6.49□□□□□ -1.37
Trim47Q8C0E3 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC6.49□□□□□ -1.37
Trim47Q8C0E3 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim47Q8C0E3 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Trim47Q8C0E3 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Trim47Q8C0E3 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim47Q8C0E3 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim47Q8C0E3 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim47Q8C0E3 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Trim47Q8C0E3 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC6.48□□□□□ -1.37
Trim47Q8C0E3 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Trim47Q8C0E3 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Trim47Q8C0E3 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Trim47Q8C0E3 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim47Q8C0E3 Gm16423-201ENSMUST00000120078 947 ntBASIC6.48□□□□□ -1.37
Trim47Q8C0E3 Gm12293-201ENSMUST00000121898 590 ntBASIC6.48□□□□□ -1.37
Trim47Q8C0E3 Gm22959-201ENSMUST00000122514 303 ntBASIC6.48□□□□□ -1.37
Trim47Q8C0E3 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Trim47Q8C0E3 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Trim47Q8C0E3 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC6.48□□□□□ -1.37
Trim47Q8C0E3 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Trim47Q8C0E3 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Trim47Q8C0E3 Gm22492-201ENSMUST00000157192 297 ntBASIC6.48□□□□□ -1.37
Trim47Q8C0E3 Gm24767-201ENSMUST00000158509 95 ntBASIC6.48□□□□□ -1.37
Trim47Q8C0E3 Gm25365-201ENSMUST00000158852 121 ntBASIC6.48□□□□□ -1.37
Trim47Q8C0E3 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
Trim47Q8C0E3 Gm7958-201ENSMUST00000178255 468 ntBASIC6.48□□□□□ -1.37
Trim47Q8C0E3 Gm7950-201ENSMUST00000179633 468 ntBASIC6.48□□□□□ -1.37
Trim47Q8C0E3 Gm28717-201ENSMUST00000189950 315 ntBASIC6.48□□□□□ -1.37
Trim47Q8C0E3 Gm18403-201ENSMUST00000192907 529 ntBASIC6.48□□□□□ -1.37
Trim47Q8C0E3 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC6.48□□□□□ -1.37
Trim47Q8C0E3 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC6.48□□□□□ -1.37
Trim47Q8C0E3 Igkv4-75-201ENSMUST00000197204 359 ntBASIC6.48□□□□□ -1.37
Trim47Q8C0E3 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC6.48□□□□□ -1.37
Trim47Q8C0E3 Gm5284-201ENSMUST00000199053 903 ntBASIC6.48□□□□□ -1.37
Trim47Q8C0E3 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim47Q8C0E3 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Trim47Q8C0E3 Gm29754-201ENSMUST00000206269 358 ntBASIC6.48□□□□□ -1.37
Trim47Q8C0E3 Gm5027-201ENSMUST00000206700 375 ntBASIC6.48□□□□□ -1.37
Trim47Q8C0E3 AC168056.2-201ENSMUST00000223591 269 ntBASIC6.48□□□□□ -1.37
Trim47Q8C0E3 AC125399.1-201ENSMUST00000224236 595 ntBASIC6.48□□□□□ -1.37
Trim47Q8C0E3 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim47Q8C0E3 Gm8724-201ENSMUST00000081668 483 ntBASIC6.48□□□□□ -1.37
Trim47Q8C0E3 Gm23624-201ENSMUST00000082463 321 ntBASIC6.48□□□□□ -1.37
Trim47Q8C0E3 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim47Q8C0E3 Gm44248-201ENSMUST00000203079 1549 ntBASIC6.48□□□□□ -1.37
Trim47Q8C0E3 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim47Q8C0E3 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Trim47Q8C0E3 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Trim47Q8C0E3 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC6.48□□□□□ -1.37
Trim47Q8C0E3 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC6.48□□□□□ -1.37
Trim47Q8C0E3 CT030170.3-201ENSMUST00000221205 1815 ntBASIC6.48□□□□□ -1.37
Trim47Q8C0E3 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Trim47Q8C0E3 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Trim47Q8C0E3 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC6.47□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms