Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 AC192333.6-201ENSMUST00000224565 725 ntBASIC5.3□□□□□ -1.56
Scaf4Q6PFF0 CT956049.1-201ENSMUST00000225671 763 ntBASIC5.3□□□□□ -1.56
Scaf4Q6PFF0 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Scaf4Q6PFF0 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Scaf4Q6PFF0 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Scaf4Q6PFF0 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Scaf4Q6PFF0 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Scaf4Q6PFF0 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Scaf4Q6PFF0 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Scaf4Q6PFF0 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Scaf4Q6PFF0 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Scaf4Q6PFF0 Gm23404-201ENSMUST00000082543 97 ntBASIC5.3□□□□□ -1.56
Scaf4Q6PFF0 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Scaf4Q6PFF0 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Scaf4Q6PFF0 AC124446.1-201ENSMUST00000221027 2644 ntBASIC5.3□□□□□ -1.56
Scaf4Q6PFF0 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Scaf4Q6PFF0 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC5.3□□□□□ -1.56
Scaf4Q6PFF0 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Scaf4Q6PFF0 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Scaf4Q6PFF0 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Scaf4Q6PFF0 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Scaf4Q6PFF0 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Scaf4Q6PFF0 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Scaf4Q6PFF0 Gm18163-201ENSMUST00000197877 1643 ntBASIC5.3□□□□□ -1.56
Scaf4Q6PFF0 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Gm10933-201ENSMUST00000221891 1861 ntBASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Gm42755-201ENSMUST00000198533 1493 ntBASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Gm14385-201ENSMUST00000116315 876 ntBASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Gm11908-201ENSMUST00000117755 347 ntBASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Gm15981-201ENSMUST00000119196 457 ntBASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Gm15331-201ENSMUST00000120225 385 ntBASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Gm13220-201ENSMUST00000121535 508 ntBASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Gm25335-201ENSMUST00000158043 103 ntBASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Gm23354-201ENSMUST00000158426 104 ntBASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Gm24175-201ENSMUST00000158931 129 ntBASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Gm22932-201ENSMUST00000175510 72 ntBASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Gm21809-201ENSMUST00000178495 468 ntBASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Gm17412-201ENSMUST00000179261 468 ntBASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Gm27855-201ENSMUST00000184122 128 ntBASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Gm37659-201ENSMUST00000194574 111 ntBASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Gm37760-201ENSMUST00000194726 3841 ntBASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Trav5d-2-201ENSMUST00000196107 275 ntBASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 AC157822.1-201ENSMUST00000196643 80 ntBASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Gm43516-201ENSMUST00000196891 322 ntBASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Trav5n-2-201ENSMUST00000197136 275 ntBASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Gm43494-201ENSMUST00000197672 388 ntBASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Gm44852-201ENSMUST00000207950 369 ntBASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Gm45375-201ENSMUST00000210338 280 ntBASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 AC102287.1-201ENSMUST00000211412 454 ntBASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Gm45850-201ENSMUST00000212536 338 ntBASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Gm3442-201ENSMUST00000216808 710 ntBASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Gm4263-201ENSMUST00000220693 1101 ntBASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 AC126685.1-201ENSMUST00000221001 121 ntBASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 AC174776.1-201ENSMUST00000221509 405 ntBASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 AC174776.2-201ENSMUST00000222561 405 ntBASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 AC115878.1-201ENSMUST00000227247 334 ntBASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Gm36962-201ENSMUST00000192114 1761 ntBASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Scaf4Q6PFF0 Gm37096-201ENSMUST00000192317 2058 ntBASIC5.28□□□□□ -1.56
Scaf4Q6PFF0 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Scaf4Q6PFF0 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Scaf4Q6PFF0 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Scaf4Q6PFF0 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
Scaf4Q6PFF0 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Scaf4Q6PFF0 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
Scaf4Q6PFF0 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Scaf4Q6PFF0 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Scaf4Q6PFF0 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Scaf4Q6PFF0 Gm43490-201ENSMUST00000197593 2652 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms