Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Sh3rf1Q69ZI1 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sh3rf1Q69ZI1 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sh3rf1Q69ZI1 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sh3rf1Q69ZI1 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC5.69□□□□□ -1.5
Sh3rf1Q69ZI1 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sh3rf1Q69ZI1 AL670757.1-201ENSMUST00000223668 1959 ntBASIC5.69□□□□□ -1.5
Sh3rf1Q69ZI1 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Sh3rf1Q69ZI1 Gm19514-201ENSMUST00000206856 4489 ntBASIC5.69□□□□□ -1.5
Sh3rf1Q69ZI1 Gm37212-201ENSMUST00000192582 3650 ntBASIC5.69□□□□□ -1.5
Sh3rf1Q69ZI1 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Sh3rf1Q69ZI1 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
Sh3rf1Q69ZI1 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sh3rf1Q69ZI1 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sh3rf1Q69ZI1 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC5.68□□□□□ -1.5
Sh3rf1Q69ZI1 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sh3rf1Q69ZI1 Gm43567-201ENSMUST00000197581 1978 ntBASIC5.68□□□□□ -1.5
Sh3rf1Q69ZI1 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sh3rf1Q69ZI1 Gm3616-201ENSMUST00000174430 2514 ntBASIC5.68□□□□□ -1.5
Sh3rf1Q69ZI1 Gm3683-201ENSMUST00000175701 2513 ntBASIC5.68□□□□□ -1.5
Sh3rf1Q69ZI1 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sh3rf1Q69ZI1 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Sh3rf1Q69ZI1 Mir466b-8-201ENSMUST00000103883 86 ntBASIC5.68□□□□□ -1.5
Sh3rf1Q69ZI1 n-R5s82-201ENSMUST00000104213 109 ntBASIC5.68□□□□□ -1.5
Sh3rf1Q69ZI1 Gm23910-201ENSMUST00000104597 132 ntBASIC5.68□□□□□ -1.5
Sh3rf1Q69ZI1 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sh3rf1Q69ZI1 Gm11561-201ENSMUST00000117429 417 ntBASIC5.68□□□□□ -1.5
Sh3rf1Q69ZI1 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC5.68□□□□□ -1.5
Sh3rf1Q69ZI1 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC5.68□□□□□ -1.5
Sh3rf1Q69ZI1 Gm5405-201ENSMUST00000120478 609 ntBASIC5.68□□□□□ -1.5
Sh3rf1Q69ZI1 Gm14605-201ENSMUST00000120599 268 ntBASIC5.68□□□□□ -1.5
Sh3rf1Q69ZI1 Gm12494-201ENSMUST00000121684 521 ntBASIC5.68□□□□□ -1.5
Sh3rf1Q69ZI1 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sh3rf1Q69ZI1 Gm25152-201ENSMUST00000157117 114 ntBASIC5.68□□□□□ -1.5
Sh3rf1Q69ZI1 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC5.68□□□□□ -1.5
Sh3rf1Q69ZI1 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sh3rf1Q69ZI1 Gm28257-201ENSMUST00000185244 463 ntBASIC5.68□□□□□ -1.5
Sh3rf1Q69ZI1 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sh3rf1Q69ZI1 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC5.68□□□□□ -1.5
Sh3rf1Q69ZI1 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sh3rf1Q69ZI1 Gm43043-201ENSMUST00000196579 412 ntBASIC5.68□□□□□ -1.5
Sh3rf1Q69ZI1 Mir466e-201ENSMUST00000198862 84 ntBASIC5.68□□□□□ -1.5
Sh3rf1Q69ZI1 Mir3970-201ENSMUST00000199287 90 ntBASIC5.68□□□□□ -1.5
Sh3rf1Q69ZI1 Mir466c-1-201ENSMUST00000200654 84 ntBASIC5.68□□□□□ -1.5
Sh3rf1Q69ZI1 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sh3rf1Q69ZI1 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC5.68□□□□□ -1.5
Sh3rf1Q69ZI1 Gm20786-201ENSMUST00000212649 436 ntBASIC5.68□□□□□ -1.5
Sh3rf1Q69ZI1 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC5.68□□□□□ -1.5
Sh3rf1Q69ZI1 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sh3rf1Q69ZI1 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC5.68□□□□□ -1.5
Sh3rf1Q69ZI1 AC168056.2-201ENSMUST00000223591 269 ntBASIC5.68□□□□□ -1.5
Sh3rf1Q69ZI1 AC154598.1-201ENSMUST00000227079 347 ntBASIC5.68□□□□□ -1.5
Sh3rf1Q69ZI1 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sh3rf1Q69ZI1 Gm23624-201ENSMUST00000082463 321 ntBASIC5.68□□□□□ -1.5
Sh3rf1Q69ZI1 Gm23096-201ENSMUST00000083447 107 ntBASIC5.68□□□□□ -1.5
Sh3rf1Q69ZI1 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Sh3rf1Q69ZI1 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Sh3rf1Q69ZI1 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
Sh3rf1Q69ZI1 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sh3rf1Q69ZI1 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sh3rf1Q69ZI1 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sh3rf1Q69ZI1 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC5.68□□□□□ -1.5
Sh3rf1Q69ZI1 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Sh3rf1Q69ZI1 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Sh3rf1Q69ZI1 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Sh3rf1Q69ZI1 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Sh3rf1Q69ZI1 Gm4954-201ENSMUST00000135069 1601 ntBASIC5.67□□□□□ -1.5
Sh3rf1Q69ZI1 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Sh3rf1Q69ZI1 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sh3rf1Q69ZI1 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Sh3rf1Q69ZI1 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
Sh3rf1Q69ZI1 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sh3rf1Q69ZI1 Gm13890-201ENSMUST00000117578 390 ntBASIC5.67□□□□□ -1.5
Sh3rf1Q69ZI1 Gm12850-201ENSMUST00000119210 436 ntBASIC5.67□□□□□ -1.5
Sh3rf1Q69ZI1 Gm13531-201ENSMUST00000121893 543 ntBASIC5.67□□□□□ -1.5
Sh3rf1Q69ZI1 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC5.67□□□□□ -1.5
Sh3rf1Q69ZI1 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC5.67□□□□□ -1.5
Sh3rf1Q69ZI1 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC5.67□□□□□ -1.5
Sh3rf1Q69ZI1 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Sh3rf1Q69ZI1 Gm23332-201ENSMUST00000157424 275 ntBASIC5.67□□□□□ -1.5
Sh3rf1Q69ZI1 Gm23280-201ENSMUST00000157905 139 ntBASIC5.67□□□□□ -1.5
Sh3rf1Q69ZI1 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Sh3rf1Q69ZI1 Gm17421-201ENSMUST00000167845 674 ntBASIC5.67□□□□□ -1.5
Sh3rf1Q69ZI1 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC5.67□□□□□ -1.5
Sh3rf1Q69ZI1 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC5.67□□□□□ -1.5
Sh3rf1Q69ZI1 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC5.67□□□□□ -1.5
Sh3rf1Q69ZI1 Gm22852-201ENSMUST00000177899 101 ntBASIC5.67□□□□□ -1.5
Sh3rf1Q69ZI1 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Sh3rf1Q69ZI1 Gm8532-201ENSMUST00000179174 461 ntBASIC5.67□□□□□ -1.5
Sh3rf1Q69ZI1 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Sh3rf1Q69ZI1 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Sh3rf1Q69ZI1 Gm21399-201ENSMUST00000180210 597 ntBASIC5.67□□□□□ -1.5
Sh3rf1Q69ZI1 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC5.67□□□□□ -1.5
Sh3rf1Q69ZI1 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Sh3rf1Q69ZI1 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Sh3rf1Q69ZI1 Gm43115-201ENSMUST00000196244 160 ntBASIC5.67□□□□□ -1.5
Sh3rf1Q69ZI1 Gm43070-201ENSMUST00000196938 415 ntBASIC5.67□□□□□ -1.5
Sh3rf1Q69ZI1 Gm44219-201ENSMUST00000203005 273 ntBASIC5.67□□□□□ -1.5
Sh3rf1Q69ZI1 Gm45081-201ENSMUST00000206281 572 ntBASIC5.67□□□□□ -1.5
Sh3rf1Q69ZI1 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC5.67□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms