Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm23179-201ENSMUST00000158693 304 ntBASIC4.22□□□□□ -1.73
Upf3bQ3ULL6 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Upf3bQ3ULL6 Gm25999-201ENSMUST00000175398 133 ntBASIC4.22□□□□□ -1.73
Upf3bQ3ULL6 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
Upf3bQ3ULL6 Mir6345-201ENSMUST00000184286 128 ntBASIC4.22□□□□□ -1.73
Upf3bQ3ULL6 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC4.22□□□□□ -1.73
Upf3bQ3ULL6 Gm29598-201ENSMUST00000188996 588 ntBASIC4.22□□□□□ -1.73
Upf3bQ3ULL6 Gm28500-201ENSMUST00000190286 151 ntBASIC4.22□□□□□ -1.73
Upf3bQ3ULL6 Gm37416-201ENSMUST00000193596 318 ntBASIC4.22□□□□□ -1.73
Upf3bQ3ULL6 Gm45032-201ENSMUST00000205375 520 ntBASIC4.22□□□□□ -1.73
Upf3bQ3ULL6 AC166343.1-201ENSMUST00000213261 577 ntBASIC4.22□□□□□ -1.73
Upf3bQ3ULL6 AC154634.3-201ENSMUST00000224589 736 ntBASIC4.22□□□□□ -1.73
Upf3bQ3ULL6 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Upf3bQ3ULL6 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Upf3bQ3ULL6 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Upf3bQ3ULL6 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Upf3bQ3ULL6 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Upf3bQ3ULL6 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Upf3bQ3ULL6 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
Upf3bQ3ULL6 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
Upf3bQ3ULL6 AC123858.1-201ENSMUST00000226948 1874 ntBASIC4.22□□□□□ -1.73
Upf3bQ3ULL6 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Upf3bQ3ULL6 Gm37478-201ENSMUST00000193624 3495 ntBASIC4.22□□□□□ -1.73
Upf3bQ3ULL6 AC153522.2-201ENSMUST00000218389 3853 ntBASIC4.21□□□□□ -1.73
Upf3bQ3ULL6 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.73
Upf3bQ3ULL6 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
Upf3bQ3ULL6 Gm38240-201ENSMUST00000195110 2487 ntBASIC4.21□□□□□ -1.73
Upf3bQ3ULL6 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
Upf3bQ3ULL6 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Upf3bQ3ULL6 Gm15180-201ENSMUST00000117745 492 ntBASIC4.21□□□□□ -1.74
Upf3bQ3ULL6 Gm15994-201ENSMUST00000118029 402 ntBASIC4.21□□□□□ -1.74
Upf3bQ3ULL6 Gm14172-201ENSMUST00000118255 644 ntBASIC4.21□□□□□ -1.74
Upf3bQ3ULL6 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC4.21□□□□□ -1.74
Upf3bQ3ULL6 Gm13170-201ENSMUST00000119716 643 ntBASIC4.21□□□□□ -1.74
Upf3bQ3ULL6 Gm11645-201ENSMUST00000121589 649 ntBASIC4.21□□□□□ -1.74
Upf3bQ3ULL6 Gm23198-201ENSMUST00000158811 91 ntBASIC4.21□□□□□ -1.74
Upf3bQ3ULL6 Gm2862-201ENSMUST00000161524 328 ntBASIC4.21□□□□□ -1.74
Upf3bQ3ULL6 Mir1251-201ENSMUST00000175486 84 ntBASIC4.21□□□□□ -1.74
Upf3bQ3ULL6 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Upf3bQ3ULL6 Gm27834-201ENSMUST00000183427 125 ntBASIC4.21□□□□□ -1.74
Upf3bQ3ULL6 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Upf3bQ3ULL6 Olfr790-204ENSMUST00000218901 1070 ntBASIC4.21□□□□□ -1.74
Upf3bQ3ULL6 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC4.21□□□□□ -1.74
Upf3bQ3ULL6 AC140368.1-202ENSMUST00000226131 658 ntBASIC4.21□□□□□ -1.74
Upf3bQ3ULL6 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Upf3bQ3ULL6 Gm23518-201ENSMUST00000082835 153 ntBASIC4.21□□□□□ -1.74
Upf3bQ3ULL6 Gm25200-201ENSMUST00000083094 130 ntBASIC4.21□□□□□ -1.74
Upf3bQ3ULL6 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Upf3bQ3ULL6 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Upf3bQ3ULL6 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Upf3bQ3ULL6 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Upf3bQ3ULL6 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
Upf3bQ3ULL6 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Upf3bQ3ULL6 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Upf3bQ3ULL6 Gm37498-201ENSMUST00000193524 4002 ntBASIC4.2□□□□□ -1.74
Upf3bQ3ULL6 Gm18422-202ENSMUST00000203798 2214 ntBASIC4.2□□□□□ -1.74
Upf3bQ3ULL6 Mir147-201ENSMUST00000102354 79 ntBASIC4.2□□□□□ -1.74
Upf3bQ3ULL6 Gm13567-201ENSMUST00000118026 247 ntBASIC4.2□□□□□ -1.74
Upf3bQ3ULL6 Gm11566-201ENSMUST00000118550 203 ntBASIC4.2□□□□□ -1.74
Upf3bQ3ULL6 Gm11718-201ENSMUST00000119942 537 ntBASIC4.2□□□□□ -1.74
Upf3bQ3ULL6 Gm13677-201ENSMUST00000120739 595 ntBASIC4.2□□□□□ -1.74
Upf3bQ3ULL6 Gm13865-201ENSMUST00000120957 865 ntBASIC4.2□□□□□ -1.74
Upf3bQ3ULL6 Gm22519-201ENSMUST00000158270 178 ntBASIC4.2□□□□□ -1.74
Upf3bQ3ULL6 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC4.2□□□□□ -1.74
Upf3bQ3ULL6 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Upf3bQ3ULL6 Gm21960-201ENSMUST00000181924 452 ntBASIC4.2□□□□□ -1.74
Upf3bQ3ULL6 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC4.2□□□□□ -1.74
Upf3bQ3ULL6 Gm38080-201ENSMUST00000194035 268 ntBASIC4.2□□□□□ -1.74
Upf3bQ3ULL6 Gm43559-201ENSMUST00000198755 466 ntBASIC4.2□□□□□ -1.74
Upf3bQ3ULL6 Gm43371-201ENSMUST00000202838 1031 ntBASIC4.2□□□□□ -1.74
Upf3bQ3ULL6 Gm8774-201ENSMUST00000203621 692 ntBASIC4.2□□□□□ -1.74
Upf3bQ3ULL6 Gm18944-201ENSMUST00000207672 643 ntBASIC4.2□□□□□ -1.74
Upf3bQ3ULL6 Gm8745-201ENSMUST00000207846 782 ntBASIC4.2□□□□□ -1.74
Upf3bQ3ULL6 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Upf3bQ3ULL6 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC4.2□□□□□ -1.74
Upf3bQ3ULL6 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC4.2□□□□□ -1.74
Upf3bQ3ULL6 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Upf3bQ3ULL6 Gm17829-201ENSMUST00000219782 344 ntBASIC4.2□□□□□ -1.74
Upf3bQ3ULL6 CT009711.3-201ENSMUST00000225882 250 ntBASIC4.2□□□□□ -1.74
Upf3bQ3ULL6 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Upf3bQ3ULL6 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Upf3bQ3ULL6 Gm7099-201ENSMUST00000080066 554 ntBASIC4.2□□□□□ -1.74
Upf3bQ3ULL6 Gm26165-201ENSMUST00000083791 138 ntBASIC4.2□□□□□ -1.74
Upf3bQ3ULL6 Gm44321-201ENSMUST00000204262 2855 ntBASIC4.2□□□□□ -1.74
Upf3bQ3ULL6 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Upf3bQ3ULL6 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Upf3bQ3ULL6 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Upf3bQ3ULL6 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Upf3bQ3ULL6 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Upf3bQ3ULL6 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Upf3bQ3ULL6 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Upf3bQ3ULL6 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Upf3bQ3ULL6 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
Upf3bQ3ULL6 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Upf3bQ3ULL6 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
Upf3bQ3ULL6 Gm26273-201ENSMUST00000104180 131 ntBASIC4.19□□□□□ -1.74
Upf3bQ3ULL6 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
Upf3bQ3ULL6 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC4.19□□□□□ -1.74
Upf3bQ3ULL6 Gm14282-201ENSMUST00000119484 240 ntBASIC4.19□□□□□ -1.74
Upf3bQ3ULL6 Gm22204-201ENSMUST00000122654 327 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 96.2 ms