Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Igkv2-107-201ENSMUST00000196000 313 ntBASIC4.28□□□□□ -1.72
Trim63Q38HM4 Gm42509-201ENSMUST00000197390 781 ntBASIC4.28□□□□□ -1.72
Trim63Q38HM4 Gm43203-201ENSMUST00000200130 558 ntBASIC4.28□□□□□ -1.72
Trim63Q38HM4 Gm19726-201ENSMUST00000205008 240 ntBASIC4.28□□□□□ -1.72
Trim63Q38HM4 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Trim63Q38HM4 Gm6929-201ENSMUST00000210930 468 ntBASIC4.28□□□□□ -1.72
Trim63Q38HM4 Gm18903-201ENSMUST00000215343 480 ntBASIC4.28□□□□□ -1.72
Trim63Q38HM4 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC4.28□□□□□ -1.72
Trim63Q38HM4 AC159297.2-201ENSMUST00000219567 1075 ntBASIC4.28□□□□□ -1.72
Trim63Q38HM4 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC4.28□□□□□ -1.72
Trim63Q38HM4 AC153548.2-201ENSMUST00000219770 885 ntBASIC4.28□□□□□ -1.72
Trim63Q38HM4 Gm17820-201ENSMUST00000220213 1068 ntBASIC4.28□□□□□ -1.72
Trim63Q38HM4 Gm9309-201ENSMUST00000223537 546 ntBASIC4.28□□□□□ -1.72
Trim63Q38HM4 4932702P03Rik-203ENSMUST00000225028 670 ntBASIC4.28□□□□□ -1.72
Trim63Q38HM4 AC133958.1-201ENSMUST00000227085 961 ntBASIC4.28□□□□□ -1.72
Trim63Q38HM4 AC155237.2-201ENSMUST00000228487 478 ntBASIC4.28□□□□□ -1.72
Trim63Q38HM4 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Trim63Q38HM4 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Trim63Q38HM4 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Trim63Q38HM4 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Trim63Q38HM4 Gm8074-201ENSMUST00000095071 252 ntBASIC4.28□□□□□ -1.72
Trim63Q38HM4 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Trim63Q38HM4 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Trim63Q38HM4 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
Trim63Q38HM4 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
Trim63Q38HM4 Gm43027-201ENSMUST00000202906 3691 ntBASIC4.27□□□□□ -1.73
Trim63Q38HM4 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Trim63Q38HM4 AC122382.2-201ENSMUST00000225128 3602 ntBASIC4.27□□□□□ -1.73
Trim63Q38HM4 AC155830.1-201ENSMUST00000220050 3836 ntBASIC4.27□□□□□ -1.73
Trim63Q38HM4 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Trim63Q38HM4 Gm38240-201ENSMUST00000195110 2487 ntBASIC4.27□□□□□ -1.73
Trim63Q38HM4 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Trim63Q38HM4 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Trim63Q38HM4 n-R5s172-201ENSMUST00000104508 114 ntBASIC4.27□□□□□ -1.73
Trim63Q38HM4 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
Trim63Q38HM4 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
Trim63Q38HM4 Gm12468-201ENSMUST00000116189 404 ntBASIC4.27□□□□□ -1.73
Trim63Q38HM4 Gm13732-201ENSMUST00000117753 535 ntBASIC4.27□□□□□ -1.73
Trim63Q38HM4 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Trim63Q38HM4 Gm11517-201ENSMUST00000119491 387 ntBASIC4.27□□□□□ -1.73
Trim63Q38HM4 Gm15037-201ENSMUST00000120358 259 ntBASIC4.27□□□□□ -1.73
Trim63Q38HM4 Gm11553-201ENSMUST00000120682 240 ntBASIC4.27□□□□□ -1.73
Trim63Q38HM4 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC4.27□□□□□ -1.73
Trim63Q38HM4 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC4.27□□□□□ -1.73
Trim63Q38HM4 Gm24836-201ENSMUST00000122609 108 ntBASIC4.27□□□□□ -1.73
Trim63Q38HM4 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC4.27□□□□□ -1.73
Trim63Q38HM4 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC4.27□□□□□ -1.73
Trim63Q38HM4 E130111B04Rik-201ENSMUST00000156781 450 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Trim63Q38HM4 Gm24767-201ENSMUST00000158509 95 ntBASIC4.27□□□□□ -1.73
Trim63Q38HM4 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
Trim63Q38HM4 Gm17159-201ENSMUST00000169043 482 ntBASIC4.27□□□□□ -1.73
Trim63Q38HM4 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Trim63Q38HM4 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC4.27□□□□□ -1.73
Trim63Q38HM4 Gm25675-201ENSMUST00000174979 118 ntBASIC4.27□□□□□ -1.73
Trim63Q38HM4 Gm24300-201ENSMUST00000177809 109 ntBASIC4.27□□□□□ -1.73
Trim63Q38HM4 Gm24017-201ENSMUST00000178726 109 ntBASIC4.27□□□□□ -1.73
Trim63Q38HM4 Gm23952-201ENSMUST00000179380 109 ntBASIC4.27□□□□□ -1.73
Trim63Q38HM4 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Trim63Q38HM4 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Trim63Q38HM4 Gm27360-201ENSMUST00000183487 80 ntBASIC4.27□□□□□ -1.73
Trim63Q38HM4 Gm8676-201ENSMUST00000184206 637 ntBASIC4.27□□□□□ -1.73
Trim63Q38HM4 Gm28263-201ENSMUST00000185884 400 ntBASIC4.27□□□□□ -1.73
Trim63Q38HM4 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Trim63Q38HM4 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC4.27□□□□□ -1.73
Trim63Q38HM4 Gm28500-201ENSMUST00000190286 151 ntBASIC4.27□□□□□ -1.73
Trim63Q38HM4 Gm37336-202ENSMUST00000193705 468 ntBASIC4.27□□□□□ -1.73
Trim63Q38HM4 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC4.27□□□□□ -1.73
Trim63Q38HM4 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC4.27□□□□□ -1.73
Trim63Q38HM4 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC4.27□□□□□ -1.73
Trim63Q38HM4 Gm44411-201ENSMUST00000204172 349 ntBASIC4.27□□□□□ -1.73
Trim63Q38HM4 Gm44523-201ENSMUST00000205616 417 ntBASIC4.27□□□□□ -1.73
Trim63Q38HM4 Gm45614-201ENSMUST00000209994 721 ntBASIC4.27□□□□□ -1.73
Trim63Q38HM4 Gm17850-201ENSMUST00000210023 1154 ntBASIC4.27□□□□□ -1.73
Trim63Q38HM4 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC4.27□□□□□ -1.73
Trim63Q38HM4 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC4.27□□□□□ -1.73
Trim63Q38HM4 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Trim63Q38HM4 AC124729.1-202ENSMUST00000225587 938 ntBASIC4.27□□□□□ -1.73
Trim63Q38HM4 AC133176.1-201ENSMUST00000226668 219 ntBASIC4.27□□□□□ -1.73
Trim63Q38HM4 AC164883.9-201ENSMUST00000228042 399 ntBASIC4.27□□□□□ -1.73
Trim63Q38HM4 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Trim63Q38HM4 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Trim63Q38HM4 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Trim63Q38HM4 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Trim63Q38HM4 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Trim63Q38HM4 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Trim63Q38HM4 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Trim63Q38HM4 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
Trim63Q38HM4 Gm3616-201ENSMUST00000174430 2514 ntBASIC4.27□□□□□ -1.73
Trim63Q38HM4 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Trim63Q38HM4 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Trim63Q38HM4 AC166358.5-201ENSMUST00000220706 1302 ntBASIC4.26□□□□□ -1.73
Trim63Q38HM4 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Trim63Q38HM4 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC4.26□□□□□ -1.73
Trim63Q38HM4 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim63Q38HM4 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC4.26□□□□□ -1.73
Trim63Q38HM4 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Trim63Q38HM4 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Trim63Q38HM4 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC4.26□□□□□ -1.73
Trim63Q38HM4 Gm23063-201ENSMUST00000102350 93 ntBASIC4.26□□□□□ -1.73
Trim63Q38HM4 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms