Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Col9a1Q05722 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Col9a1Q05722 Nyap2-205ENSMUST00000137862 3393 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Col9a1Q05722 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col9a1Q05722 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col9a1Q05722 Gm38069-201ENSMUST00000195360 2144 ntBASIC6.44□□□□□ -1.38
Col9a1Q05722 Gm15575-201ENSMUST00000119414 1581 ntBASIC6.44□□□□□ -1.38
Col9a1Q05722 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Col9a1Q05722 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC6.44□□□□□ -1.38
Col9a1Q05722 Zfp846-202ENSMUST00000115557 12974 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col9a1Q05722 Itga2-201ENSMUST00000056117 7108 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col9a1Q05722 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Col9a1Q05722 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC6.44□□□□□ -1.38
Col9a1Q05722 Gm37107-201ENSMUST00000195326 2552 ntBASIC6.44□□□□□ -1.38
Col9a1Q05722 Vmn1r50-203ENSMUST00000226577 2240 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Col9a1Q05722 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col9a1Q05722 Gm11576-201ENSMUST00000117433 417 ntBASIC6.44□□□□□ -1.38
Col9a1Q05722 Gm2066-201ENSMUST00000118046 389 ntBASIC6.44□□□□□ -1.38
Col9a1Q05722 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC6.44□□□□□ -1.38
Col9a1Q05722 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC6.44□□□□□ -1.38
Col9a1Q05722 Gm11551-201ENSMUST00000147438 410 ntTSL 2 BASIC6.44□□□□□ -1.38
Col9a1Q05722 Gm24862-201ENSMUST00000179103 79 ntBASIC6.44□□□□□ -1.38
Col9a1Q05722 Gm23310-201ENSMUST00000179105 79 ntBASIC6.44□□□□□ -1.38
Col9a1Q05722 Gm25461-201ENSMUST00000179293 79 ntBASIC6.44□□□□□ -1.38
Col9a1Q05722 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC6.44□□□□□ -1.38
Col9a1Q05722 Mir219c-201ENSMUST00000199860 60 ntBASIC6.44□□□□□ -1.38
Col9a1Q05722 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC6.44□□□□□ -1.38
Col9a1Q05722 AC099578.1-201ENSMUST00000220147 435 ntBASIC6.44□□□□□ -1.38
Col9a1Q05722 AC154840.1-201ENSMUST00000225216 408 ntBASIC6.44□□□□□ -1.38
Col9a1Q05722 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col9a1Q05722 Gm25587-201ENSMUST00000082498 166 ntBASIC6.44□□□□□ -1.38
Col9a1Q05722 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col9a1Q05722 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Col9a1Q05722 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Col9a1Q05722 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC6.44□□□□□ -1.38
Col9a1Q05722 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Col9a1Q05722 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col9a1Q05722 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Col9a1Q05722 AC153955.2-201ENSMUST00000216739 4129 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Col9a1Q05722 Gm26744-201ENSMUST00000181834 1731 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Col9a1Q05722 Gm5512-202ENSMUST00000220222 1522 ntBASIC6.44□□□□□ -1.38
Col9a1Q05722 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col9a1Q05722 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Col9a1Q05722 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Col9a1Q05722 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC6.44□□□□□ -1.38
Col9a1Q05722 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC6.44□□□□□ -1.38
Col9a1Q05722 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Col9a1Q05722 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Col9a1Q05722 Kpna2-ps-201ENSMUST00000120025 1569 ntBASIC6.44□□□□□ -1.38
Col9a1Q05722 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col9a1Q05722 Nt5dc1-203ENSMUST00000105512 2727 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col9a1Q05722 Gm35755-201ENSMUST00000222392 2077 ntBASIC6.43□□□□□ -1.38
Col9a1Q05722 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col9a1Q05722 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col9a1Q05722 Gm45358-201ENSMUST00000209492 2305 ntBASIC6.43□□□□□ -1.38
Col9a1Q05722 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col9a1Q05722 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col9a1Q05722 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col9a1Q05722 Gm43389-201ENSMUST00000196080 2595 ntBASIC6.43□□□□□ -1.38
Col9a1Q05722 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col9a1Q05722 Kcna2-203ENSMUST00000197470 4370 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Col9a1Q05722 Lpp-201ENSMUST00000038053 15647 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col9a1Q05722 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Col9a1Q05722 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC6.43□□□□□ -1.38
Col9a1Q05722 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC6.43□□□□□ -1.38
Col9a1Q05722 Ect2l-204ENSMUST00000208948 2862 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Col9a1Q05722 Gm22273-201ENSMUST00000104040 132 ntBASIC6.43□□□□□ -1.38
Col9a1Q05722 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col9a1Q05722 Gm7927-201ENSMUST00000118818 880 ntBASIC6.43□□□□□ -1.38
Col9a1Q05722 Gm12118-201ENSMUST00000119766 532 ntBASIC6.43□□□□□ -1.38
Col9a1Q05722 Mup-ps19-201ENSMUST00000120390 519 ntBASIC6.43□□□□□ -1.38
Col9a1Q05722 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC6.43□□□□□ -1.38
Col9a1Q05722 Gm26372-201ENSMUST00000157831 236 ntBASIC6.43□□□□□ -1.38
Col9a1Q05722 Gm23894-201ENSMUST00000158107 313 ntBASIC6.43□□□□□ -1.38
Col9a1Q05722 Gm26022-201ENSMUST00000158663 108 ntBASIC6.43□□□□□ -1.38
Col9a1Q05722 Gm16125-201ENSMUST00000159003 339 ntBASIC6.43□□□□□ -1.38
Col9a1Q05722 Gm3242-201ENSMUST00000171273 485 ntBASIC6.43□□□□□ -1.38
Col9a1Q05722 Mir5107-201ENSMUST00000175586 88 ntBASIC6.43□□□□□ -1.38
Col9a1Q05722 Mir7047-201ENSMUST00000184595 64 ntBASIC6.43□□□□□ -1.38
Col9a1Q05722 Mir6933-201ENSMUST00000184982 81 ntBASIC6.43□□□□□ -1.38
Col9a1Q05722 Gm18444-201ENSMUST00000191239 629 ntBASIC6.43□□□□□ -1.38
Col9a1Q05722 Gm44259-201ENSMUST00000204996 298 ntBASIC6.43□□□□□ -1.38
Col9a1Q05722 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC6.43□□□□□ -1.38
Col9a1Q05722 AC126267.1-201ENSMUST00000214282 284 ntBASIC6.43□□□□□ -1.38
Col9a1Q05722 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC6.43□□□□□ -1.38
Col9a1Q05722 AC153794.2-201ENSMUST00000222650 550 ntBASIC6.43□□□□□ -1.38
Col9a1Q05722 AC168056.2-201ENSMUST00000223591 269 ntBASIC6.43□□□□□ -1.38
Col9a1Q05722 AC241593.1-201ENSMUST00000224768 397 ntBASIC6.43□□□□□ -1.38
Col9a1Q05722 Gm5670-201ENSMUST00000093546 372 ntBASIC6.43□□□□□ -1.38
Col9a1Q05722 Olfr212-201ENSMUST00000075756 2672 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col9a1Q05722 Gm38118-201ENSMUST00000192052 2222 ntBASIC6.43□□□□□ -1.38
Col9a1Q05722 Vcan-206ENSMUST00000159910 8332 ntTSL 5 BASIC6.43□□□□□ -1.38
Col9a1Q05722 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col9a1Q05722 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col9a1Q05722 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col9a1Q05722 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC6.43□□□□□ -1.38
Col9a1Q05722 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col9a1Q05722 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col9a1Q05722 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col9a1Q05722 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms