Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC6.03□□□□□ -1.44
Col6a1Q04857 Gm12891-201ENSMUST00000119358 240 ntBASIC6.03□□□□□ -1.44
Col6a1Q04857 Gm2768-201ENSMUST00000121062 250 ntBASIC6.03□□□□□ -1.44
Col6a1Q04857 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC6.03□□□□□ -1.44
Col6a1Q04857 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC6.03□□□□□ -1.44
Col6a1Q04857 Ear-ps9-201ENSMUST00000161963 460 ntBASIC6.03□□□□□ -1.44
Col6a1Q04857 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC6.03□□□□□ -1.44
Col6a1Q04857 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Col6a1Q04857 Gm25942-201ENSMUST00000180080 110 ntBASIC6.03□□□□□ -1.44
Col6a1Q04857 Gm27754-201ENSMUST00000183340 126 ntBASIC6.03□□□□□ -1.44
Col6a1Q04857 Gm2914-201ENSMUST00000186120 328 ntBASIC6.03□□□□□ -1.44
Col6a1Q04857 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Col6a1Q04857 Gm5983-201ENSMUST00000197739 770 ntBASIC6.03□□□□□ -1.44
Col6a1Q04857 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC6.03□□□□□ -1.44
Col6a1Q04857 Gm5735-201ENSMUST00000207053 167 ntBASIC6.03□□□□□ -1.44
Col6a1Q04857 AC069561.3-201ENSMUST00000217321 114 ntBASIC6.03□□□□□ -1.44
Col6a1Q04857 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC6.03□□□□□ -1.44
Col6a1Q04857 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC6.03□□□□□ -1.44
Col6a1Q04857 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Col6a1Q04857 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC6.03□□□□□ -1.44
Col6a1Q04857 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
Col6a1Q04857 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col6a1Q04857 Gm37504-201ENSMUST00000192537 2374 ntBASIC6.03□□□□□ -1.44
Col6a1Q04857 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC6.03□□□□□ -1.44
Col6a1Q04857 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Col6a1Q04857 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Col6a1Q04857 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC6.03□□□□□ -1.44
Col6a1Q04857 Gm29293-201ENSMUST00000189416 2188 ntBASIC6.03□□□□□ -1.44
Col6a1Q04857 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col6a1Q04857 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col6a1Q04857 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC6.03□□□□□ -1.44
Col6a1Q04857 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Col6a1Q04857 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Col6a1Q04857 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Col6a1Q04857 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col6a1Q04857 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC6.02□□□□□ -1.45
Col6a1Q04857 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Col6a1Q04857 Gm44625-201ENSMUST00000207838 1561 ntBASIC6.02□□□□□ -1.45
Col6a1Q04857 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Col6a1Q04857 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
Col6a1Q04857 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC6.02□□□□□ -1.45
Col6a1Q04857 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Col6a1Q04857 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col6a1Q04857 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col6a1Q04857 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Col6a1Q04857 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col6a1Q04857 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC6.02□□□□□ -1.45
Col6a1Q04857 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Col6a1Q04857 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Col6a1Q04857 Gm15142-201ENSMUST00000121013 856 ntBASIC6.02□□□□□ -1.45
Col6a1Q04857 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC6.02□□□□□ -1.45
Col6a1Q04857 Gm14638-201ENSMUST00000121338 216 ntBASIC6.02□□□□□ -1.45
Col6a1Q04857 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC6.02□□□□□ -1.45
Col6a1Q04857 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Col6a1Q04857 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC6.02□□□□□ -1.45
Col6a1Q04857 Gm23583-201ENSMUST00000158533 289 ntBASIC6.02□□□□□ -1.45
Col6a1Q04857 Gm15974-201ENSMUST00000159103 531 ntBASIC6.02□□□□□ -1.45
Col6a1Q04857 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC6.02□□□□□ -1.45
Col6a1Q04857 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC6.02□□□□□ -1.45
Col6a1Q04857 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Col6a1Q04857 Gm20519-201ENSMUST00000173684 359 ntBASIC6.02□□□□□ -1.45
Col6a1Q04857 Gm20701-201ENSMUST00000176082 347 ntBASIC6.02□□□□□ -1.45
Col6a1Q04857 Gm25944-201ENSMUST00000178758 94 ntBASIC6.02□□□□□ -1.45
Col6a1Q04857 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC6.02□□□□□ -1.45
Col6a1Q04857 Gm28094-201ENSMUST00000185262 390 ntBASIC6.02□□□□□ -1.45
Col6a1Q04857 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC6.02□□□□□ -1.45
Col6a1Q04857 Gm37882-201ENSMUST00000195254 196 ntBASIC6.02□□□□□ -1.45
Col6a1Q04857 Gm44373-201ENSMUST00000196112 169 ntBASIC6.02□□□□□ -1.45
Col6a1Q04857 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC6.02□□□□□ -1.45
Col6a1Q04857 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC6.02□□□□□ -1.45
Col6a1Q04857 Gm44776-201ENSMUST00000207212 381 ntBASIC6.02□□□□□ -1.45
Col6a1Q04857 Gm2628-201ENSMUST00000218019 426 ntBASIC6.02□□□□□ -1.45
Col6a1Q04857 AC174776.1-201ENSMUST00000221509 405 ntBASIC6.02□□□□□ -1.45
Col6a1Q04857 AC174776.2-201ENSMUST00000222561 405 ntBASIC6.02□□□□□ -1.45
Col6a1Q04857 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Col6a1Q04857 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC6.02□□□□□ -1.45
Col6a1Q04857 n-R5s79-201ENSMUST00000083071 120 ntBASIC6.02□□□□□ -1.45
Col6a1Q04857 n-R5s13-201ENSMUST00000093707 119 ntBASIC6.02□□□□□ -1.45
Col6a1Q04857 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Col6a1Q04857 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col6a1Q04857 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col6a1Q04857 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col6a1Q04857 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Col6a1Q04857 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Col6a1Q04857 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col6a1Q04857 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC6.02□□□□□ -1.45
Col6a1Q04857 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC6.02□□□□□ -1.45
Col6a1Q04857 AC122355.1-201ENSMUST00000228155 4184 ntBASIC6.02□□□□□ -1.45
Col6a1Q04857 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Col6a1Q04857 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Col6a1Q04857 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col6a1Q04857 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Col6a1Q04857 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Col6a1Q04857 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col6a1Q04857 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col6a1Q04857 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col6a1Q04857 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col6a1Q04857 AC162908.1-201ENSMUST00000219164 4563 ntBASIC6.01□□□□□ -1.45
Col6a1Q04857 Gm23294-201ENSMUST00000104150 164 ntBASIC6.01□□□□□ -1.45
Col6a1Q04857 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC6.01□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 95.1 ms