Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm5527-201ENSMUST00000179821 642 ntBASIC4.77□□□□□ -1.65
Col8a1Q00780 Mir7685-201ENSMUST00000183555 62 ntBASIC4.77□□□□□ -1.65
Col8a1Q00780 Gm37838-201ENSMUST00000194464 312 ntBASIC4.77□□□□□ -1.65
Col8a1Q00780 Gm42621-201ENSMUST00000198114 275 ntBASIC4.77□□□□□ -1.65
Col8a1Q00780 Gm43144-201ENSMUST00000198256 485 ntBASIC4.77□□□□□ -1.65
Col8a1Q00780 Gm29781-201ENSMUST00000203862 478 ntBASIC4.77□□□□□ -1.65
Col8a1Q00780 Gm19252-201ENSMUST00000204705 305 ntBASIC4.77□□□□□ -1.65
Col8a1Q00780 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC4.77□□□□□ -1.65
Col8a1Q00780 Gm6850-201ENSMUST00000210031 530 ntBASIC4.77□□□□□ -1.65
Col8a1Q00780 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC4.77□□□□□ -1.65
Col8a1Q00780 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC4.77□□□□□ -1.65
Col8a1Q00780 AC161114.1-201ENSMUST00000218223 474 ntBASIC4.77□□□□□ -1.65
Col8a1Q00780 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC4.77□□□□□ -1.65
Col8a1Q00780 AC154552.4-201ENSMUST00000222171 151 ntBASIC4.77□□□□□ -1.65
Col8a1Q00780 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Col8a1Q00780 Gm4963-201ENSMUST00000072718 378 ntBASIC4.77□□□□□ -1.65
Col8a1Q00780 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Col8a1Q00780 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Col8a1Q00780 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC4.77□□□□□ -1.65
Col8a1Q00780 Gm25401-201ENSMUST00000082975 106 ntBASIC4.77□□□□□ -1.65
Col8a1Q00780 Gm24319-201ENSMUST00000083389 107 ntBASIC4.77□□□□□ -1.65
Col8a1Q00780 Mir194-1-201ENSMUST00000083647 67 ntBASIC4.77□□□□□ -1.65
Col8a1Q00780 Gm43891-201ENSMUST00000205132 3112 ntBASIC4.77□□□□□ -1.65
Col8a1Q00780 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Col8a1Q00780 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Col8a1Q00780 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Col8a1Q00780 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Col8a1Q00780 Gm20172-201ENSMUST00000193138 1551 ntBASIC4.77□□□□□ -1.65
Col8a1Q00780 AC122355.1-201ENSMUST00000228155 4184 ntBASIC4.77□□□□□ -1.65
Col8a1Q00780 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Col8a1Q00780 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC4.77□□□□□ -1.65
Col8a1Q00780 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Col8a1Q00780 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Col8a1Q00780 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Col8a1Q00780 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC4.76□□□□□ -1.65
Col8a1Q00780 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col8a1Q00780 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
Col8a1Q00780 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Col8a1Q00780 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Col8a1Q00780 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col8a1Q00780 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Col8a1Q00780 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Col8a1Q00780 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
Col8a1Q00780 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC4.76□□□□□ -1.65
Col8a1Q00780 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Col8a1Q00780 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Col8a1Q00780 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col8a1Q00780 Gm11975-201ENSMUST00000118772 481 ntBASIC4.76□□□□□ -1.65
Col8a1Q00780 Gm13170-201ENSMUST00000119716 643 ntBASIC4.76□□□□□ -1.65
Col8a1Q00780 Gm13220-201ENSMUST00000121535 508 ntBASIC4.76□□□□□ -1.65
Col8a1Q00780 Gm14362-201ENSMUST00000121679 273 ntBASIC4.76□□□□□ -1.65
Col8a1Q00780 Gm14821-201ENSMUST00000121975 435 ntBASIC4.76□□□□□ -1.65
Col8a1Q00780 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC4.76□□□□□ -1.65
Col8a1Q00780 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Col8a1Q00780 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC4.76□□□□□ -1.65
Col8a1Q00780 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC4.76□□□□□ -1.65
Col8a1Q00780 Gm15254-201ENSMUST00000149567 273 ntBASIC4.76□□□□□ -1.65
Col8a1Q00780 Mir1946b-201ENSMUST00000157853 133 ntBASIC4.76□□□□□ -1.65
Col8a1Q00780 Gm25335-201ENSMUST00000158043 103 ntBASIC4.76□□□□□ -1.65
Col8a1Q00780 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC4.76□□□□□ -1.65
Col8a1Q00780 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC4.76□□□□□ -1.65
Col8a1Q00780 Gm3170-201ENSMUST00000168753 850 ntBASIC4.76□□□□□ -1.65
Col8a1Q00780 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Col8a1Q00780 Gm3348-201ENSMUST00000177813 850 ntBASIC4.76□□□□□ -1.65
Col8a1Q00780 Gm25451-201ENSMUST00000177832 121 ntBASIC4.76□□□□□ -1.65
Col8a1Q00780 Gm5372-201ENSMUST00000187540 409 ntBASIC4.76□□□□□ -1.65
Col8a1Q00780 Gm21088-201ENSMUST00000190875 316 ntBASIC4.76□□□□□ -1.65
Col8a1Q00780 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC4.76□□□□□ -1.65
Col8a1Q00780 Gm7181-201ENSMUST00000202197 434 ntBASIC4.76□□□□□ -1.65
Col8a1Q00780 Gm4714-201ENSMUST00000203395 279 ntBASIC4.76□□□□□ -1.65
Col8a1Q00780 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC4.76□□□□□ -1.65
Col8a1Q00780 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC4.76□□□□□ -1.65
Col8a1Q00780 Gm45405-201ENSMUST00000211544 609 ntBASIC4.76□□□□□ -1.65
Col8a1Q00780 Gm2607-201ENSMUST00000212389 627 ntBASIC4.76□□□□□ -1.65
Col8a1Q00780 CT956049.1-201ENSMUST00000225671 763 ntBASIC4.76□□□□□ -1.65
Col8a1Q00780 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col8a1Q00780 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Col8a1Q00780 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC4.76□□□□□ -1.65
Col8a1Q00780 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col8a1Q00780 Gm26176-201ENSMUST00000083795 105 ntBASIC4.76□□□□□ -1.65
Col8a1Q00780 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC4.76□□□□□ -1.65
Col8a1Q00780 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Col8a1Q00780 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col8a1Q00780 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col8a1Q00780 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Col8a1Q00780 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Col8a1Q00780 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col8a1Q00780 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Col8a1Q00780 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Col8a1Q00780 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Col8a1Q00780 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col8a1Q00780 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col8a1Q00780 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col8a1Q00780 CT009757.5-201ENSMUST00000221858 3425 ntBASIC4.75□□□□□ -1.65
Col8a1Q00780 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col8a1Q00780 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Col8a1Q00780 Gm12633-201ENSMUST00000117742 1705 ntBASIC4.75□□□□□ -1.65
Col8a1Q00780 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col8a1Q00780 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col8a1Q00780 Gm44440-201ENSMUST00000203139 2373 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 137.4 ms