Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm11403-201ENSMUST00000122195 369 ntBASIC3.46□□□□□ -1.86
Nkx3-1P97436 Gm24380-201ENSMUST00000122696 324 ntBASIC3.46□□□□□ -1.86
Nkx3-1P97436 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Nkx3-1P97436 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC3.46□□□□□ -1.86
Nkx3-1P97436 Gm22059-201ENSMUST00000157544 104 ntBASIC3.46□□□□□ -1.86
Nkx3-1P97436 Gm23781-201ENSMUST00000157940 308 ntBASIC3.46□□□□□ -1.86
Nkx3-1P97436 Gm24898-201ENSMUST00000158133 106 ntBASIC3.46□□□□□ -1.86
Nkx3-1P97436 Gm3339-201ENSMUST00000163462 475 ntBASIC3.46□□□□□ -1.86
Nkx3-1P97436 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Nkx3-1P97436 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC3.46□□□□□ -1.86
Nkx3-1P97436 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC3.46□□□□□ -1.86
Nkx3-1P97436 Gm34779-201ENSMUST00000210036 263 ntBASIC3.46□□□□□ -1.86
Nkx3-1P97436 Gm18120-201ENSMUST00000220079 511 ntBASIC3.46□□□□□ -1.86
Nkx3-1P97436 AC154335.1-201ENSMUST00000224744 395 ntBASIC3.46□□□□□ -1.86
Nkx3-1P97436 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Nkx3-1P97436 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Nkx3-1P97436 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Nkx3-1P97436 Gm26072-201ENSMUST00000083135 107 ntBASIC3.46□□□□□ -1.86
Nkx3-1P97436 Gm25481-201ENSMUST00000083221 158 ntBASIC3.46□□□□□ -1.86
Nkx3-1P97436 Mir28a-201ENSMUST00000083560 86 ntBASIC3.46□□□□□ -1.86
Nkx3-1P97436 AC124572.2-201ENSMUST00000218041 5152 ntBASIC3.46□□□□□ -1.86
Nkx3-1P97436 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Nkx3-1P97436 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Nkx3-1P97436 AC154323.3-201ENSMUST00000226927 1660 ntBASIC3.46□□□□□ -1.86
Nkx3-1P97436 Gm43341-201ENSMUST00000200104 1308 ntBASIC3.45□□□□□ -1.86
Nkx3-1P97436 Gm43793-201ENSMUST00000201645 1333 ntBASIC3.45□□□□□ -1.86
Nkx3-1P97436 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Nkx3-1P97436 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
Nkx3-1P97436 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Nkx3-1P97436 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Nkx3-1P97436 Gm45093-201ENSMUST00000206859 2463 ntBASIC3.45□□□□□ -1.86
Nkx3-1P97436 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC3.45□□□□□ -1.86
Nkx3-1P97436 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC3.45□□□□□ -1.86
Nkx3-1P97436 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Nkx3-1P97436 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
Nkx3-1P97436 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Nkx3-1P97436 Gm23322-201ENSMUST00000104464 167 ntBASIC3.45□□□□□ -1.86
Nkx3-1P97436 Gm15783-201ENSMUST00000117521 633 ntBASIC3.45□□□□□ -1.86
Nkx3-1P97436 Gm15141-201ENSMUST00000121860 729 ntBASIC3.45□□□□□ -1.86
Nkx3-1P97436 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC3.45□□□□□ -1.86
Nkx3-1P97436 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC3.45□□□□□ -1.86
Nkx3-1P97436 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Nkx3-1P97436 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC3.45□□□□□ -1.86
Nkx3-1P97436 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC3.45□□□□□ -1.86
Nkx3-1P97436 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC3.45□□□□□ -1.86
Nkx3-1P97436 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC3.45□□□□□ -1.86
Nkx3-1P97436 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC3.45□□□□□ -1.86
Nkx3-1P97436 Gm19214-201ENSMUST00000191956 1083 ntBASIC3.45□□□□□ -1.86
Nkx3-1P97436 Trbv28-201ENSMUST00000192804 264 ntBASIC3.45□□□□□ -1.86
Nkx3-1P97436 Gm17954-201ENSMUST00000195893 607 ntBASIC3.45□□□□□ -1.86
Nkx3-1P97436 Gm18429-201ENSMUST00000198707 421 ntBASIC3.45□□□□□ -1.86
Nkx3-1P97436 Gm17887-201ENSMUST00000200194 547 ntBASIC3.45□□□□□ -1.86
Nkx3-1P97436 Gm44099-201ENSMUST00000203299 112 ntBASIC3.45□□□□□ -1.86
Nkx3-1P97436 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC3.45□□□□□ -1.86
Nkx3-1P97436 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC3.45□□□□□ -1.86
Nkx3-1P97436 Gm45317-201ENSMUST00000210385 223 ntBASIC3.45□□□□□ -1.86
Nkx3-1P97436 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC3.45□□□□□ -1.86
Nkx3-1P97436 Gm7380-201ENSMUST00000211599 466 ntBASIC3.45□□□□□ -1.86
Nkx3-1P97436 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC3.45□□□□□ -1.86
Nkx3-1P97436 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Nkx3-1P97436 AL590503.1-201ENSMUST00000222053 321 ntBASIC3.45□□□□□ -1.86
Nkx3-1P97436 AC154727.1-201ENSMUST00000226537 499 ntBASIC3.45□□□□□ -1.86
Nkx3-1P97436 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Nkx3-1P97436 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Nkx3-1P97436 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Nkx3-1P97436 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Nkx3-1P97436 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Nkx3-1P97436 Gm23443-201ENSMUST00000082916 128 ntBASIC3.45□□□□□ -1.86
Nkx3-1P97436 Gm25200-201ENSMUST00000083094 130 ntBASIC3.45□□□□□ -1.86
Nkx3-1P97436 Gm6361-201ENSMUST00000091031 435 ntBASIC3.45□□□□□ -1.86
Nkx3-1P97436 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Nkx3-1P97436 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Nkx3-1P97436 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Nkx3-1P97436 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
Nkx3-1P97436 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC3.45□□□□□ -1.86
Nkx3-1P97436 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Nkx3-1P97436 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC3.44□□□□□ -1.86
Nkx3-1P97436 Gm44682-201ENSMUST00000208501 2614 ntBASIC3.44□□□□□ -1.86
Nkx3-1P97436 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Nkx3-1P97436 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Nkx3-1P97436 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Nkx3-1P97436 AC101945.4-201ENSMUST00000228464 1976 ntBASIC3.44□□□□□ -1.86
Nkx3-1P97436 Gm25727-201ENSMUST00000104522 131 ntBASIC3.44□□□□□ -1.86
Nkx3-1P97436 Gm3055-201ENSMUST00000105316 720 ntTSL 5 BASIC3.44□□□□□ -1.86
Nkx3-1P97436 Gm12458-201ENSMUST00000119387 495 ntBASIC3.44□□□□□ -1.86
Nkx3-1P97436 Gm11718-201ENSMUST00000119942 537 ntBASIC3.44□□□□□ -1.86
Nkx3-1P97436 Gm13532-201ENSMUST00000120373 240 ntBASIC3.44□□□□□ -1.86
Nkx3-1P97436 Gm15014-201ENSMUST00000120742 258 ntBASIC3.44□□□□□ -1.86
Nkx3-1P97436 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC3.44□□□□□ -1.86
Nkx3-1P97436 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Nkx3-1P97436 Gm25572-201ENSMUST00000157527 172 ntBASIC3.44□□□□□ -1.86
Nkx3-1P97436 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Nkx3-1P97436 Gm29475-201ENSMUST00000190767 312 ntBASIC3.44□□□□□ -1.86
Nkx3-1P97436 Gm37239-201ENSMUST00000193510 141 ntBASIC3.44□□□□□ -1.86
Nkx3-1P97436 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC3.44□□□□□ -1.86
Nkx3-1P97436 Gm45553-201ENSMUST00000209929 507 ntBASIC3.44□□□□□ -1.86
Nkx3-1P97436 Gm6929-201ENSMUST00000210930 468 ntBASIC3.44□□□□□ -1.86
Nkx3-1P97436 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC3.44□□□□□ -1.86
Nkx3-1P97436 CT010511.1-201ENSMUST00000224570 315 ntBASIC3.44□□□□□ -1.86
Nkx3-1P97436 AC155167.1-201ENSMUST00000228931 614 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms