Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 AC155805.1-201ENSMUST00000222419 3808 ntBASIC4.82□□□□□ -1.64
Lig3P97386 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Lig3P97386 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Lig3P97386 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC4.82□□□□□ -1.64
Lig3P97386 Snord65-201ENSMUST00000104269 72 ntBASIC4.82□□□□□ -1.64
Lig3P97386 Gm15058-201ENSMUST00000117689 458 ntBASIC4.82□□□□□ -1.64
Lig3P97386 Gm15090-201ENSMUST00000118787 1196 ntBASIC4.82□□□□□ -1.64
Lig3P97386 Gm12564-201ENSMUST00000119860 321 ntBASIC4.82□□□□□ -1.64
Lig3P97386 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC4.82□□□□□ -1.64
Lig3P97386 Gm13502-201ENSMUST00000121574 684 ntBASIC4.82□□□□□ -1.64
Lig3P97386 Gm15089-201ENSMUST00000122332 1196 ntBASIC4.82□□□□□ -1.64
Lig3P97386 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC4.82□□□□□ -1.64
Lig3P97386 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Lig3P97386 Gm25669-201ENSMUST00000157699 112 ntBASIC4.82□□□□□ -1.64
Lig3P97386 Gm24730-201ENSMUST00000158228 117 ntBASIC4.82□□□□□ -1.64
Lig3P97386 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Lig3P97386 Mir5134-201ENSMUST00000175529 78 ntBASIC4.82□□□□□ -1.64
Lig3P97386 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC4.82□□□□□ -1.64
Lig3P97386 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC4.82□□□□□ -1.64
Lig3P97386 Gm4526-201ENSMUST00000186039 920 ntBASIC4.82□□□□□ -1.64
Lig3P97386 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC4.82□□□□□ -1.64
Lig3P97386 Gm30280-201ENSMUST00000192214 262 ntBASIC4.82□□□□□ -1.64
Lig3P97386 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC4.82□□□□□ -1.64
Lig3P97386 Gm35570-201ENSMUST00000198730 681 ntBASIC4.82□□□□□ -1.64
Lig3P97386 Gm42976-201ENSMUST00000200313 222 ntBASIC4.82□□□□□ -1.64
Lig3P97386 Gm43090-201ENSMUST00000202459 314 ntBASIC4.82□□□□□ -1.64
Lig3P97386 Gm18258-201ENSMUST00000210413 542 ntBASIC4.82□□□□□ -1.64
Lig3P97386 Gm39197-201ENSMUST00000212069 457 ntBASIC4.82□□□□□ -1.64
Lig3P97386 Gm19170-201ENSMUST00000212440 1084 ntBASIC4.82□□□□□ -1.64
Lig3P97386 Gm18507-201ENSMUST00000218855 525 ntBASIC4.82□□□□□ -1.64
Lig3P97386 Ear-ps9-202ENSMUST00000226796 245 ntBASIC4.82□□□□□ -1.64
Lig3P97386 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Lig3P97386 Mir215-201ENSMUST00000083628 112 ntBASIC4.82□□□□□ -1.64
Lig3P97386 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC4.82□□□□□ -1.64
Lig3P97386 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Lig3P97386 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.82□□□□□ -1.64
Lig3P97386 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Lig3P97386 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Lig3P97386 AC144772.3-201ENSMUST00000228829 3126 ntBASIC4.81□□□□□ -1.64
Lig3P97386 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC4.81□□□□□ -1.64
Lig3P97386 Gm13310-201ENSMUST00000120962 1381 ntBASIC4.81□□□□□ -1.64
Lig3P97386 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Lig3P97386 Gm7869-201ENSMUST00000121457 1322 ntBASIC4.81□□□□□ -1.64
Lig3P97386 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Lig3P97386 Gm43793-201ENSMUST00000201645 1333 ntBASIC4.81□□□□□ -1.64
Lig3P97386 Gm24608-201ENSMUST00000104381 136 ntBASIC4.81□□□□□ -1.64
Lig3P97386 Gm16106-201ENSMUST00000119187 294 ntBASIC4.81□□□□□ -1.64
Lig3P97386 Gm14788-201ENSMUST00000119457 375 ntBASIC4.81□□□□□ -1.64
Lig3P97386 Gm12577-201ENSMUST00000119701 574 ntBASIC4.81□□□□□ -1.64
Lig3P97386 Gm12041-201ENSMUST00000121606 602 ntBASIC4.81□□□□□ -1.64
Lig3P97386 Gm14564-201ENSMUST00000122159 294 ntBASIC4.81□□□□□ -1.64
Lig3P97386 Gm24854-201ENSMUST00000158025 98 ntBASIC4.81□□□□□ -1.64
Lig3P97386 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Lig3P97386 Gm17061-201ENSMUST00000163167 499 ntBASIC4.81□□□□□ -1.64
Lig3P97386 Gm5258-201ENSMUST00000165437 327 ntBASIC4.81□□□□□ -1.64
Lig3P97386 Gm17159-201ENSMUST00000169043 482 ntBASIC4.81□□□□□ -1.64
Lig3P97386 Gm8902-201ENSMUST00000174341 1096 ntBASIC4.81□□□□□ -1.64
Lig3P97386 Gm18416-201ENSMUST00000175635 1003 ntBASIC4.81□□□□□ -1.64
Lig3P97386 Gm20657-201ENSMUST00000177079 515 ntBASIC4.81□□□□□ -1.64
Lig3P97386 Gm18415-201ENSMUST00000177464 647 ntBASIC4.81□□□□□ -1.64
Lig3P97386 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Lig3P97386 Mir713-201ENSMUST00000178651 108 ntBASIC4.81□□□□□ -1.64
Lig3P97386 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC4.81□□□□□ -1.64
Lig3P97386 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lig3P97386 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lig3P97386 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC4.81□□□□□ -1.64
Lig3P97386 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC4.81□□□□□ -1.64
Lig3P97386 Gm19233-201ENSMUST00000219772 936 ntBASIC4.81□□□□□ -1.64
Lig3P97386 AC154270.1-201ENSMUST00000227226 426 ntBASIC4.81□□□□□ -1.64
Lig3P97386 AC130673.2-201ENSMUST00000228091 797 ntBASIC4.81□□□□□ -1.64
Lig3P97386 AC164437.2-201ENSMUST00000228915 797 ntBASIC4.81□□□□□ -1.64
Lig3P97386 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Lig3P97386 Olfr670-201ENSMUST00000050482 939 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Lig3P97386 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC4.81□□□□□ -1.64
Lig3P97386 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC4.81□□□□□ -1.64
Lig3P97386 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Lig3P97386 Gm25739-201ENSMUST00000082886 107 ntBASIC4.81□□□□□ -1.64
Lig3P97386 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Lig3P97386 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Lig3P97386 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC4.81□□□□□ -1.64
Lig3P97386 AC131743.1-201ENSMUST00000222138 4024 ntBASIC4.81□□□□□ -1.64
Lig3P97386 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lig3P97386 Gm43844-201ENSMUST00000202926 5605 ntBASIC4.81□□□□□ -1.64
Lig3P97386 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lig3P97386 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Lig3P97386 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Lig3P97386 Gm42552-201ENSMUST00000196754 4497 ntBASIC4.8□□□□□ -1.64
Lig3P97386 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Lig3P97386 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Lig3P97386 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Lig3P97386 Gm3563-201ENSMUST00000172963 1628 ntBASIC4.8□□□□□ -1.64
Lig3P97386 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Lig3P97386 Mir669o-201ENSMUST00000103898 96 ntBASIC4.8□□□□□ -1.64
Lig3P97386 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Lig3P97386 Gm12311-201ENSMUST00000118803 374 ntBASIC4.8□□□□□ -1.64
Lig3P97386 Gm5924-201ENSMUST00000132554 871 ntBASIC4.8□□□□□ -1.64
Lig3P97386 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC4.8□□□□□ -1.64
Lig3P97386 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC4.8□□□□□ -1.64
Lig3P97386 Gm22792-201ENSMUST00000157225 133 ntBASIC4.8□□□□□ -1.64
Lig3P97386 Gm25456-201ENSMUST00000157952 109 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms