Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
PrkdcP97313 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
PrkdcP97313 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
PrkdcP97313 Gm43024-201ENSMUST00000196770 4352 ntBASIC2.6□□□□□ -1.99
PrkdcP97313 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
PrkdcP97313 Gm14681-201ENSMUST00000118047 411 ntBASIC2.6□□□□□ -1.99
PrkdcP97313 Gm13873-201ENSMUST00000119208 427 ntBASIC2.6□□□□□ -1.99
PrkdcP97313 Gm11281-201ENSMUST00000141391 576 ntBASIC2.6□□□□□ -1.99
PrkdcP97313 Gm26100-201ENSMUST00000157245 127 ntBASIC2.6□□□□□ -1.99
PrkdcP97313 Gm37085-201ENSMUST00000193780 196 ntBASIC2.6□□□□□ -1.99
PrkdcP97313 Gm19232-201ENSMUST00000211621 652 ntBASIC2.6□□□□□ -1.99
PrkdcP97313 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC2.6□□□□□ -1.99
PrkdcP97313 AC134596.1-201ENSMUST00000222016 1922 ntBASIC2.6□□□□□ -1.99
PrkdcP97313 Fam13a-201ENSMUST00000089860 5786 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
PrkdcP97313 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
PrkdcP97313 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
PrkdcP97313 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC2.6□□□□□ -1.99
PrkdcP97313 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
PrkdcP97313 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
PrkdcP97313 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
PrkdcP97313 Gm24122-201ENSMUST00000104107 132 ntBASIC2.6□□□□□ -1.99
PrkdcP97313 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC2.6□□□□□ -1.99
PrkdcP97313 Igkv9-128-201ENSMUST00000196602 353 ntBASIC2.6□□□□□ -1.99
PrkdcP97313 AC098719.1-201ENSMUST00000228920 371 ntBASIC2.6□□□□□ -1.99
PrkdcP97313 Mir202-201ENSMUST00000083568 72 ntBASIC2.6□□□□□ -1.99
PrkdcP97313 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
PrkdcP97313 Olfr734-203ENSMUST00000217152 4416 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
PrkdcP97313 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
PrkdcP97313 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
PrkdcP97313 AC192616.2-201ENSMUST00000221482 3841 ntBASIC2.6□□□□□ -1.99
PrkdcP97313 Gm37033-201ENSMUST00000193199 7350 ntBASIC2.59□□□□□ -1.99
PrkdcP97313 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
PrkdcP97313 Gm42680-201ENSMUST00000196238 2500 ntBASIC2.59□□□□□ -1.99
PrkdcP97313 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
PrkdcP97313 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
PrkdcP97313 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC2.59□□□□□ -1.99
PrkdcP97313 Gm12001-201ENSMUST00000121727 913 ntBASIC2.59□□□□□ -1.99
PrkdcP97313 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC2.59□□□□□ -1.99
PrkdcP97313 Gm6969-201ENSMUST00000140065 342 ntBASIC2.59□□□□□ -1.99
PrkdcP97313 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC2.59□□□□□ -1.99
PrkdcP97313 Gm44594-201ENSMUST00000208982 407 ntBASIC2.59□□□□□ -1.99
PrkdcP97313 Gm44543-201ENSMUST00000209136 396 ntBASIC2.59□□□□□ -1.99
PrkdcP97313 AC115750.1-201ENSMUST00000220441 567 ntBASIC2.59□□□□□ -1.99
PrkdcP97313 Vmn1r43-201ENSMUST00000089418 1069 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
PrkdcP97313 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC2.59□□□□□ -1.99
PrkdcP97313 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC2.59□□□□□ -1.99
PrkdcP97313 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
PrkdcP97313 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
PrkdcP97313 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
PrkdcP97313 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
PrkdcP97313 Gm15057-201ENSMUST00000121516 534 ntBASIC2.59□□□□□ -1.99
PrkdcP97313 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC2.59□□□□□ -1.99
PrkdcP97313 Gm44084-201ENSMUST00000203947 409 ntBASIC2.59□□□□□ -1.99
PrkdcP97313 Gm2710-201ENSMUST00000073196 603 ntBASIC2.59□□□□□ -1.99
PrkdcP97313 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
PrkdcP97313 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
PrkdcP97313 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC2.59□□□□□ -1.99
PrkdcP97313 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
PrkdcP97313 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
PrkdcP97313 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC2.59□□□□□ -2
PrkdcP97313 Gm37868-201ENSMUST00000195578 2735 ntBASIC2.59□□□□□ -2
PrkdcP97313 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC2.59□□□□□ -2
PrkdcP97313 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
PrkdcP97313 Gm14788-201ENSMUST00000119457 375 ntBASIC2.59□□□□□ -2
PrkdcP97313 Gm5060-201ENSMUST00000120072 599 ntBASIC2.59□□□□□ -2
PrkdcP97313 Gm11398-201ENSMUST00000120330 320 ntBASIC2.59□□□□□ -2
PrkdcP97313 n-R5s30-201ENSMUST00000122624 122 ntBASIC2.59□□□□□ -2
PrkdcP97313 Gm25707-201ENSMUST00000175120 96 ntBASIC2.59□□□□□ -2
PrkdcP97313 Gm42593-201ENSMUST00000198469 377 ntBASIC2.59□□□□□ -2
PrkdcP97313 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
PrkdcP97313 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
PrkdcP97313 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
PrkdcP97313 Gm37498-201ENSMUST00000193524 4002 ntBASIC2.59□□□□□ -2
PrkdcP97313 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC2.59□□□□□ -2
PrkdcP97313 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC2.58□□□□□ -2
PrkdcP97313 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
PrkdcP97313 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
PrkdcP97313 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
PrkdcP97313 Ablim1-201ENSMUST00000079360 7152 ntAPPRIS P3 TSL 5 BASIC2.58□□□□□ -2
PrkdcP97313 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC2.58□□□□□ -2
PrkdcP97313 Gm14622-201ENSMUST00000117117 468 ntBASIC2.58□□□□□ -2
PrkdcP97313 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC2.58□□□□□ -2
PrkdcP97313 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC2.58□□□□□ -2
PrkdcP97313 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC2.58□□□□□ -2
PrkdcP97313 Gm8132-201ENSMUST00000204938 640 ntBASIC2.58□□□□□ -2
PrkdcP97313 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC2.58□□□□□ -2
PrkdcP97313 AC160931.2-201ENSMUST00000221445 351 ntBASIC2.58□□□□□ -2
PrkdcP97313 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC2.58□□□□□ -2
PrkdcP97313 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC2.58□□□□□ -2
PrkdcP97313 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
PrkdcP97313 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
PrkdcP97313 Gm44283-201ENSMUST00000204461 3950 ntBASIC2.58□□□□□ -2
PrkdcP97313 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
PrkdcP97313 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
PrkdcP97313 Gm15190-201ENSMUST00000120855 276 ntBASIC2.58□□□□□ -2
PrkdcP97313 Gm27592-201ENSMUST00000157729 126 ntBASIC2.58□□□□□ -2
PrkdcP97313 Gm22174-201ENSMUST00000175050 125 ntBASIC2.58□□□□□ -2
PrkdcP97313 Gm22692-201ENSMUST00000175055 125 ntBASIC2.58□□□□□ -2
PrkdcP97313 Gm27634-201ENSMUST00000175060 126 ntBASIC2.58□□□□□ -2
PrkdcP97313 Gm26460-201ENSMUST00000175061 126 ntBASIC2.58□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 96.4 ms