Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Sf3b6P59708 Gm9278-201ENSMUST00000205508 553 ntBASIC5.05□□□□□ -1.6
Sf3b6P59708 Gm45171-201ENSMUST00000206360 736 ntBASIC5.05□□□□□ -1.6
Sf3b6P59708 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Sf3b6P59708 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Sf3b6P59708 Gm45402-201ENSMUST00000211796 223 ntBASIC5.05□□□□□ -1.6
Sf3b6P59708 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC5.05□□□□□ -1.6
Sf3b6P59708 Gm31849-201ENSMUST00000220306 375 ntBASIC5.05□□□□□ -1.6
Sf3b6P59708 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC5.05□□□□□ -1.6
Sf3b6P59708 AC115878.1-201ENSMUST00000227247 334 ntBASIC5.05□□□□□ -1.6
Sf3b6P59708 AC154436.2-201ENSMUST00000227408 208 ntBASIC5.05□□□□□ -1.6
Sf3b6P59708 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Sf3b6P59708 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Sf3b6P59708 Gm10038-201ENSMUST00000077233 441 ntBASIC5.05□□□□□ -1.6
Sf3b6P59708 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Sf3b6P59708 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Sf3b6P59708 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Sf3b6P59708 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Sf3b6P59708 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Sf3b6P59708 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC5.05□□□□□ -1.6
Sf3b6P59708 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC5.05□□□□□ -1.6
Sf3b6P59708 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Sf3b6P59708 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Sf3b6P59708 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC5.05□□□□□ -1.6
Sf3b6P59708 AC153494.1-201ENSMUST00000218664 3041 ntBASIC5.05□□□□□ -1.6
Sf3b6P59708 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Sf3b6P59708 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Sf3b6P59708 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Sf3b6P59708 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Sf3b6P59708 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Sf3b6P59708 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Sf3b6P59708 Gm29293-201ENSMUST00000189416 2188 ntBASIC5.04□□□□□ -1.6
Sf3b6P59708 Gm12633-201ENSMUST00000117742 1705 ntBASIC5.04□□□□□ -1.6
Sf3b6P59708 Gm23744-201ENSMUST00000104231 149 ntBASIC5.04□□□□□ -1.6
Sf3b6P59708 Gm25345-201ENSMUST00000104505 133 ntBASIC5.04□□□□□ -1.6
Sf3b6P59708 Gm11372-201ENSMUST00000117348 570 ntBASIC5.04□□□□□ -1.6
Sf3b6P59708 Gm14909-201ENSMUST00000117853 351 ntBASIC5.04□□□□□ -1.6
Sf3b6P59708 Gm6446-201ENSMUST00000120604 818 ntBASIC5.04□□□□□ -1.6
Sf3b6P59708 Gm15618-201ENSMUST00000121610 452 ntBASIC5.04□□□□□ -1.6
Sf3b6P59708 Gm12618-201ENSMUST00000121754 483 ntBASIC5.04□□□□□ -1.6
Sf3b6P59708 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC5.04□□□□□ -1.6
Sf3b6P59708 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Sf3b6P59708 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Sf3b6P59708 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
Sf3b6P59708 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC5.04□□□□□ -1.6
Sf3b6P59708 Gm10087-201ENSMUST00000167650 330 ntBASIC5.04□□□□□ -1.6
Sf3b6P59708 Mir3066-201ENSMUST00000175296 83 ntBASIC5.04□□□□□ -1.6
Sf3b6P59708 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC5.04□□□□□ -1.6
Sf3b6P59708 Gm24757-201ENSMUST00000176987 371 ntBASIC5.04□□□□□ -1.6
Sf3b6P59708 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Sf3b6P59708 Mir6412-201ENSMUST00000184477 97 ntBASIC5.04□□□□□ -1.6
Sf3b6P59708 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC5.04□□□□□ -1.6
Sf3b6P59708 Gm44373-201ENSMUST00000196112 169 ntBASIC5.04□□□□□ -1.6
Sf3b6P59708 Gm44295-201ENSMUST00000203805 437 ntBASIC5.04□□□□□ -1.6
Sf3b6P59708 Gm44580-201ENSMUST00000206333 877 ntBASIC5.04□□□□□ -1.6
Sf3b6P59708 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC5.04□□□□□ -1.6
Sf3b6P59708 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Sf3b6P59708 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Sf3b6P59708 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Sf3b6P59708 AC116589.7-201ENSMUST00000221061 239 ntBASIC5.04□□□□□ -1.6
Sf3b6P59708 AC164117.1-201ENSMUST00000221726 239 ntBASIC5.04□□□□□ -1.6
Sf3b6P59708 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Sf3b6P59708 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Sf3b6P59708 Gm22365-201ENSMUST00000093750 117 ntBASIC5.04□□□□□ -1.6
Sf3b6P59708 Gm44860-201ENSMUST00000208473 2346 ntBASIC5.04□□□□□ -1.6
Sf3b6P59708 Gm5925-201ENSMUST00000105016 1497 ntBASIC5.04□□□□□ -1.6
Sf3b6P59708 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
Sf3b6P59708 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Sf3b6P59708 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Sf3b6P59708 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
Sf3b6P59708 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Sf3b6P59708 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Sf3b6P59708 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Sf3b6P59708 Gm9577-201ENSMUST00000174655 2620 ntBASIC5.04□□□□□ -1.6
Sf3b6P59708 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Sf3b6P59708 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Sf3b6P59708 AC140299.2-201ENSMUST00000219546 1969 ntBASIC5.04□□□□□ -1.6
Sf3b6P59708 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Sf3b6P59708 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Sf3b6P59708 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
Sf3b6P59708 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Sf3b6P59708 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Sf3b6P59708 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Sf3b6P59708 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Sf3b6P59708 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Sf3b6P59708 Gm12388-201ENSMUST00000119112 1887 ntBASIC5.03□□□□□ -1.6
Sf3b6P59708 Gm37488-201ENSMUST00000195434 3374 ntBASIC5.03□□□□□ -1.6
Sf3b6P59708 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Sf3b6P59708 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
Sf3b6P59708 Gm14706-201ENSMUST00000117744 255 ntBASIC5.03□□□□□ -1.6
Sf3b6P59708 Gm13835-201ENSMUST00000118459 685 ntBASIC5.03□□□□□ -1.6
Sf3b6P59708 Gm13082-201ENSMUST00000118877 561 ntBASIC5.03□□□□□ -1.6
Sf3b6P59708 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Sf3b6P59708 Gm12488-201ENSMUST00000122449 499 ntBASIC5.03□□□□□ -1.6
Sf3b6P59708 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC5.03□□□□□ -1.6
Sf3b6P59708 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC5.03□□□□□ -1.6
Sf3b6P59708 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC5.03□□□□□ -1.6
Sf3b6P59708 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC5.03□□□□□ -1.6
Sf3b6P59708 Gm25826-201ENSMUST00000157090 137 ntBASIC5.03□□□□□ -1.6
Sf3b6P59708 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 113.2 ms