Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 AC159244.1-201ENSMUST00000220964 594 ntBASIC6.06□□□□□ -1.44
Nub1P54729 CT025616.1-201ENSMUST00000221158 412 ntBASIC6.06□□□□□ -1.44
Nub1P54729 AC114572.1-201ENSMUST00000227262 300 ntBASIC6.06□□□□□ -1.44
Nub1P54729 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Nub1P54729 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Nub1P54729 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Nub1P54729 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Nub1P54729 Snora44-201ENSMUST00000082670 129 ntBASIC6.06□□□□□ -1.44
Nub1P54729 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Nub1P54729 Gm17165-201ENSMUST00000096155 493 ntBASIC6.06□□□□□ -1.44
Nub1P54729 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Nub1P54729 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Nub1P54729 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Nub1P54729 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC6.06□□□□□ -1.44
Nub1P54729 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Nub1P54729 Gm43718-201ENSMUST00000197524 1857 ntBASIC6.06□□□□□ -1.44
Nub1P54729 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Nub1P54729 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Nub1P54729 Gm9077-201ENSMUST00000210657 2298 ntBASIC6.06□□□□□ -1.44
Nub1P54729 Gm43857-201ENSMUST00000200343 3079 ntBASIC6.06□□□□□ -1.44
Nub1P54729 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Nub1P54729 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Nub1P54729 AC132852.2-201ENSMUST00000216052 2794 ntBASIC6.06□□□□□ -1.44
Nub1P54729 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Nub1P54729 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Nub1P54729 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Nub1P54729 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Nub1P54729 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
Nub1P54729 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
Nub1P54729 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Nub1P54729 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC6.05□□□□□ -1.44
Nub1P54729 Gm37101-201ENSMUST00000191656 3660 ntBASIC6.05□□□□□ -1.44
Nub1P54729 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Nub1P54729 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Nub1P54729 Mir669g-201ENSMUST00000116809 123 ntBASIC6.05□□□□□ -1.44
Nub1P54729 Gm26156-201ENSMUST00000116999 123 ntBASIC6.05□□□□□ -1.44
Nub1P54729 Gm14771-201ENSMUST00000118249 203 ntBASIC6.05□□□□□ -1.44
Nub1P54729 Gm12803-201ENSMUST00000118907 821 ntBASIC6.05□□□□□ -1.44
Nub1P54729 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC6.05□□□□□ -1.44
Nub1P54729 Gm7079-201ENSMUST00000119726 171 ntBASIC6.05□□□□□ -1.44
Nub1P54729 Gm15177-201ENSMUST00000120491 577 ntBASIC6.05□□□□□ -1.44
Nub1P54729 Gm14919-201ENSMUST00000120839 390 ntBASIC6.05□□□□□ -1.44
Nub1P54729 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC6.05□□□□□ -1.44
Nub1P54729 Gm12732-201ENSMUST00000121688 180 ntBASIC6.05□□□□□ -1.44
Nub1P54729 Gm22960-201ENSMUST00000122517 104 ntBASIC6.05□□□□□ -1.44
Nub1P54729 Gm25781-201ENSMUST00000122527 84 ntBASIC6.05□□□□□ -1.44
Nub1P54729 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC6.05□□□□□ -1.44
Nub1P54729 Gm25348-201ENSMUST00000158961 111 ntBASIC6.05□□□□□ -1.44
Nub1P54729 Gm16290-201ENSMUST00000161175 474 ntBASIC6.05□□□□□ -1.44
Nub1P54729 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Nub1P54729 Gm26177-201ENSMUST00000178683 107 ntBASIC6.05□□□□□ -1.44
Nub1P54729 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC6.05□□□□□ -1.44
Nub1P54729 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC6.05□□□□□ -1.44
Nub1P54729 Gm27024-201ENSMUST00000182561 755 ntBASIC6.05□□□□□ -1.44
Nub1P54729 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Nub1P54729 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Nub1P54729 Gm2367-201ENSMUST00000192374 472 ntBASIC6.05□□□□□ -1.44
Nub1P54729 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Nub1P54729 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Nub1P54729 Igkv11-114-201ENSMUST00000200013 346 ntBASIC6.05□□□□□ -1.44
Nub1P54729 Gm44125-201ENSMUST00000203068 448 ntBASIC6.05□□□□□ -1.44
Nub1P54729 Gm9278-201ENSMUST00000205508 553 ntBASIC6.05□□□□□ -1.44
Nub1P54729 Gm45081-201ENSMUST00000206281 572 ntBASIC6.05□□□□□ -1.44
Nub1P54729 Gm45171-201ENSMUST00000206360 736 ntBASIC6.05□□□□□ -1.44
Nub1P54729 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC6.05□□□□□ -1.44
Nub1P54729 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC6.05□□□□□ -1.44
Nub1P54729 Gm21112-201ENSMUST00000212224 578 ntBASIC6.05□□□□□ -1.44
Nub1P54729 Gm7760-201ENSMUST00000212265 578 ntBASIC6.05□□□□□ -1.44
Nub1P54729 Gm7807-201ENSMUST00000212475 578 ntBASIC6.05□□□□□ -1.44
Nub1P54729 Gm7034-201ENSMUST00000218638 645 ntBASIC6.05□□□□□ -1.44
Nub1P54729 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC6.05□□□□□ -1.44
Nub1P54729 AC138718.1-201ENSMUST00000225947 1009 ntBASIC6.05□□□□□ -1.44
Nub1P54729 AC166369.1-201ENSMUST00000228126 351 ntBASIC6.05□□□□□ -1.44
Nub1P54729 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
Nub1P54729 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC6.05□□□□□ -1.44
Nub1P54729 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC6.05□□□□□ -1.44
Nub1P54729 Gm16335-201ENSMUST00000077495 309 ntBASIC6.05□□□□□ -1.44
Nub1P54729 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC6.05□□□□□ -1.44
Nub1P54729 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
Nub1P54729 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Nub1P54729 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Nub1P54729 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC6.04□□□□□ -1.44
Nub1P54729 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Nub1P54729 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Nub1P54729 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Nub1P54729 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Nub1P54729 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Nub1P54729 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC6.04□□□□□ -1.44
Nub1P54729 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
Nub1P54729 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC6.04□□□□□ -1.44
Nub1P54729 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Nub1P54729 Gm38299-201ENSMUST00000193214 3789 ntBASIC6.04□□□□□ -1.44
Nub1P54729 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Nub1P54729 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Nub1P54729 Gm25213-201ENSMUST00000102388 113 ntBASIC6.04□□□□□ -1.44
Nub1P54729 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Nub1P54729 Gm11219-201ENSMUST00000118565 358 ntBASIC6.04□□□□□ -1.44
Nub1P54729 Gm14520-201ENSMUST00000119258 387 ntBASIC6.04□□□□□ -1.44
Nub1P54729 Gm12482-201ENSMUST00000120435 630 ntBASIC6.04□□□□□ -1.44
Nub1P54729 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms