Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Sox3P53784 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Sox3P53784 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC4.02□□□□□ -1.77
Sox3P53784 Mir6345-201ENSMUST00000184286 128 ntBASIC4.02□□□□□ -1.77
Sox3P53784 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC4.02□□□□□ -1.77
Sox3P53784 Ighv1-28-201ENSMUST00000192987 351 ntBASIC4.02□□□□□ -1.77
Sox3P53784 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC4.02□□□□□ -1.77
Sox3P53784 Gm36985-201ENSMUST00000195595 379 ntBASIC4.02□□□□□ -1.77
Sox3P53784 Gm43491-201ENSMUST00000197133 784 ntBASIC4.02□□□□□ -1.77
Sox3P53784 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Sox3P53784 Gm19908-201ENSMUST00000204684 391 ntBASIC4.02□□□□□ -1.77
Sox3P53784 Gm44817-201ENSMUST00000205416 453 ntBASIC4.02□□□□□ -1.77
Sox3P53784 Gm46190-201ENSMUST00000219650 427 ntBASIC4.02□□□□□ -1.77
Sox3P53784 AL606513.1-201ENSMUST00000225369 579 ntBASIC4.02□□□□□ -1.77
Sox3P53784 AC117202.1-201ENSMUST00000227007 445 ntBASIC4.02□□□□□ -1.77
Sox3P53784 AC167013.2-202ENSMUST00000227035 333 ntBASIC4.02□□□□□ -1.77
Sox3P53784 Vmn1r89-206ENSMUST00000227319 985 ntBASIC4.02□□□□□ -1.77
Sox3P53784 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Sox3P53784 n-R5s182-201ENSMUST00000083889 107 ntBASIC4.02□□□□□ -1.77
Sox3P53784 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Sox3P53784 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC4.02□□□□□ -1.77
Sox3P53784 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Sox3P53784 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Sox3P53784 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Sox3P53784 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Sox3P53784 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Sox3P53784 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Sox3P53784 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Sox3P53784 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
Sox3P53784 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC4.02□□□□□ -1.77
Sox3P53784 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC4.02□□□□□ -1.77
Sox3P53784 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC4.02□□□□□ -1.77
Sox3P53784 Gm13310-201ENSMUST00000120962 1381 ntBASIC4.02□□□□□ -1.77
Sox3P53784 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Sox3P53784 AC131720.1-201ENSMUST00000218629 2132 ntBASIC4.01□□□□□ -1.77
Sox3P53784 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC4.01□□□□□ -1.77
Sox3P53784 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Sox3P53784 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Sox3P53784 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
Sox3P53784 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Sox3P53784 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Sox3P53784 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC4.01□□□□□ -1.77
Sox3P53784 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Sox3P53784 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Sox3P53784 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Sox3P53784 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC4.01□□□□□ -1.77
Sox3P53784 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC4.01□□□□□ -1.77
Sox3P53784 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Sox3P53784 Gm24281-201ENSMUST00000104234 136 ntBASIC4.01□□□□□ -1.77
Sox3P53784 Gm12564-201ENSMUST00000119860 321 ntBASIC4.01□□□□□ -1.77
Sox3P53784 Gm23959-201ENSMUST00000157208 324 ntBASIC4.01□□□□□ -1.77
Sox3P53784 Snora81-201ENSMUST00000157310 178 ntBASIC4.01□□□□□ -1.77
Sox3P53784 Gm15508-201ENSMUST00000160330 325 ntBASIC4.01□□□□□ -1.77
Sox3P53784 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC4.01□□□□□ -1.77
Sox3P53784 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC4.01□□□□□ -1.77
Sox3P53784 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC4.01□□□□□ -1.77
Sox3P53784 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC4.01□□□□□ -1.77
Sox3P53784 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Sox3P53784 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC4.01□□□□□ -1.77
Sox3P53784 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC4.01□□□□□ -1.77
Sox3P53784 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC4.01□□□□□ -1.77
Sox3P53784 Gm38234-201ENSMUST00000195204 421 ntBASIC4.01□□□□□ -1.77
Sox3P53784 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC4.01□□□□□ -1.77
Sox3P53784 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC4.01□□□□□ -1.77
Sox3P53784 Igkv11-118-201ENSMUST00000199448 346 ntBASIC4.01□□□□□ -1.77
Sox3P53784 Gm44054-201ENSMUST00000203814 372 ntBASIC4.01□□□□□ -1.77
Sox3P53784 Gm43892-201ENSMUST00000204373 265 ntBASIC4.01□□□□□ -1.77
Sox3P53784 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC4.01□□□□□ -1.77
Sox3P53784 Gm17737-201ENSMUST00000210183 1147 ntBASIC4.01□□□□□ -1.77
Sox3P53784 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC4.01□□□□□ -1.77
Sox3P53784 Olfr151-201ENSMUST00000211893 1128 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Sox3P53784 AC155921.1-201ENSMUST00000216568 3841 ntBASIC4.01□□□□□ -1.77
Sox3P53784 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
Sox3P53784 AC159263.3-201ENSMUST00000223434 460 ntBASIC4.01□□□□□ -1.77
Sox3P53784 AC154419.1-201ENSMUST00000227627 272 ntBASIC4.01□□□□□ -1.77
Sox3P53784 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Sox3P53784 Gm25739-201ENSMUST00000082886 107 ntBASIC4.01□□□□□ -1.77
Sox3P53784 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Sox3P53784 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC4.01□□□□□ -1.77
Sox3P53784 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Sox3P53784 Gm43178-201ENSMUST00000197257 1386 ntBASIC4.01□□□□□ -1.77
Sox3P53784 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Sox3P53784 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Sox3P53784 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
Sox3P53784 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Sox3P53784 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC4□□□□□ -1.77
Sox3P53784 Gm38152-201ENSMUST00000195389 3566 ntBASIC4□□□□□ -1.77
Sox3P53784 Gm25727-201ENSMUST00000104522 131 ntBASIC4□□□□□ -1.77
Sox3P53784 Gm6893-201ENSMUST00000118385 522 ntBASIC4□□□□□ -1.77
Sox3P53784 Gm15553-201ENSMUST00000118757 430 ntBASIC4□□□□□ -1.77
Sox3P53784 Gm11349-201ENSMUST00000122209 1116 ntBASIC4□□□□□ -1.77
Sox3P53784 n-R5s45-201ENSMUST00000122592 110 ntBASIC4□□□□□ -1.77
Sox3P53784 Gm25177-201ENSMUST00000122634 117 ntBASIC4□□□□□ -1.77
Sox3P53784 Gm3160-201ENSMUST00000128343 607 ntBASIC4□□□□□ -1.77
Sox3P53784 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC4□□□□□ -1.77
Sox3P53784 Gm19891-201ENSMUST00000189771 303 ntBASIC4□□□□□ -1.77
Sox3P53784 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC4□□□□□ -1.77
Sox3P53784 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC4□□□□□ -1.77
Sox3P53784 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC4□□□□□ -1.77
Sox3P53784 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC4□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 107 ms