Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col18a1P39061 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Col18a1P39061 Gm14919-201ENSMUST00000120839 390 ntBASIC6.23□□□□□ -1.41
Col18a1P39061 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC6.23□□□□□ -1.41
Col18a1P39061 Gm24505-201ENSMUST00000157682 126 ntBASIC6.23□□□□□ -1.41
Col18a1P39061 Gm27599-201ENSMUST00000183758 174 ntBASIC6.23□□□□□ -1.41
Col18a1P39061 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col18a1P39061 Gm28190-201ENSMUST00000189766 722 ntBASIC6.23□□□□□ -1.41
Col18a1P39061 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC6.23□□□□□ -1.41
Col18a1P39061 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC6.23□□□□□ -1.41
Col18a1P39061 Gm19201-201ENSMUST00000210127 778 ntBASIC6.23□□□□□ -1.41
Col18a1P39061 Gm19709-201ENSMUST00000215403 482 ntBASIC6.23□□□□□ -1.41
Col18a1P39061 Gm46193-201ENSMUST00000219399 364 ntBASIC6.23□□□□□ -1.41
Col18a1P39061 AC167669.3-201ENSMUST00000224720 393 ntBASIC6.23□□□□□ -1.41
Col18a1P39061 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col18a1P39061 n-R5s162-201ENSMUST00000082581 119 ntBASIC6.23□□□□□ -1.41
Col18a1P39061 Pm20d1-202ENSMUST00000112393 6900 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col18a1P39061 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col18a1P39061 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Col18a1P39061 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col18a1P39061 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col18a1P39061 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Col18a1P39061 Pikfyve-201ENSMUST00000081154 11237 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col18a1P39061 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Col18a1P39061 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col18a1P39061 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC6.23□□□□□ -1.41
Col18a1P39061 Naip3-201ENSMUST00000118082 4208 ntBASIC6.23□□□□□ -1.41
Col18a1P39061 Gm13712-201ENSMUST00000117484 2295 ntBASIC6.23□□□□□ -1.41
Col18a1P39061 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Col18a1P39061 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC6.23□□□□□ -1.41
Col18a1P39061 Gm11488-201ENSMUST00000117277 863 ntBASIC6.23□□□□□ -1.41
Col18a1P39061 Gm16216-201ENSMUST00000118970 1111 ntBASIC6.23□□□□□ -1.41
Col18a1P39061 Gm11363-201ENSMUST00000121672 548 ntBASIC6.23□□□□□ -1.41
Col18a1P39061 n-R5s48-201ENSMUST00000122482 110 ntBASIC6.23□□□□□ -1.41
Col18a1P39061 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC6.23□□□□□ -1.41
Col18a1P39061 Gm8121-201ENSMUST00000153583 499 ntBASIC6.23□□□□□ -1.41
Col18a1P39061 Gm22816-201ENSMUST00000157450 117 ntBASIC6.23□□□□□ -1.41
Col18a1P39061 Gm23865-201ENSMUST00000157723 97 ntBASIC6.23□□□□□ -1.41
Col18a1P39061 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col18a1P39061 Gm22254-201ENSMUST00000179186 110 ntBASIC6.23□□□□□ -1.41
Col18a1P39061 Mir7062-201ENSMUST00000185038 66 ntBASIC6.23□□□□□ -1.41
Col18a1P39061 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col18a1P39061 Gm38150-201ENSMUST00000192996 452 ntBASIC6.23□□□□□ -1.41
Col18a1P39061 Igkv15-97-201ENSMUST00000197637 339 ntBASIC6.23□□□□□ -1.41
Col18a1P39061 1110060G06Rik-201ENSMUST00000200372 499 ntBASIC6.23□□□□□ -1.41
Col18a1P39061 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC6.23□□□□□ -1.41
Col18a1P39061 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC6.23□□□□□ -1.41
Col18a1P39061 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col18a1P39061 CT030194.2-201ENSMUST00000225752 379 ntBASIC6.23□□□□□ -1.41
Col18a1P39061 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Col18a1P39061 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col18a1P39061 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Col18a1P39061 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col18a1P39061 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Col18a1P39061 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
Col18a1P39061 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Col18a1P39061 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC6.22□□□□□ -1.41
Col18a1P39061 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Col18a1P39061 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Col18a1P39061 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
Col18a1P39061 Gm12719-201ENSMUST00000118859 241 ntBASIC6.22□□□□□ -1.41
Col18a1P39061 Gm16445-201ENSMUST00000120399 714 ntBASIC6.22□□□□□ -1.41
Col18a1P39061 Gm5646-201ENSMUST00000120568 714 ntBASIC6.22□□□□□ -1.41
Col18a1P39061 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC6.22□□□□□ -1.41
Col18a1P39061 Gm12340-201ENSMUST00000121617 462 ntBASIC6.22□□□□□ -1.41
Col18a1P39061 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC6.22□□□□□ -1.41
Col18a1P39061 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
Col18a1P39061 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC6.22□□□□□ -1.41
Col18a1P39061 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC6.22□□□□□ -1.41
Col18a1P39061 Gm22076-201ENSMUST00000158601 84 ntBASIC6.22□□□□□ -1.41
Col18a1P39061 Gm24553-201ENSMUST00000158653 131 ntBASIC6.22□□□□□ -1.41
Col18a1P39061 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
Col18a1P39061 Gm15143-201ENSMUST00000178180 714 ntBASIC6.22□□□□□ -1.41
Col18a1P39061 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
Col18a1P39061 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Col18a1P39061 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Col18a1P39061 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Col18a1P39061 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC6.22□□□□□ -1.41
Col18a1P39061 Gm27539-201ENSMUST00000184971 224 ntBASIC6.22□□□□□ -1.41
Col18a1P39061 Gm8392-201ENSMUST00000185647 835 ntBASIC6.22□□□□□ -1.41
Col18a1P39061 Gm29335-201ENSMUST00000188361 459 ntBASIC6.22□□□□□ -1.41
Col18a1P39061 Gm4248-201ENSMUST00000196905 316 ntBASIC6.22□□□□□ -1.41
Col18a1P39061 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Col18a1P39061 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC6.22□□□□□ -1.41
Col18a1P39061 Olfr367-ps-203ENSMUST00000213819 541 ntTSL 3 BASIC6.22□□□□□ -1.41
Col18a1P39061 AC159472.1-201ENSMUST00000218178 463 ntBASIC6.22□□□□□ -1.41
Col18a1P39061 Mir132-201ENSMUST00000083603 66 ntBASIC6.22□□□□□ -1.41
Col18a1P39061 Gm29112-201ENSMUST00000188962 3487 ntBASIC6.22□□□□□ -1.41
Col18a1P39061 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col18a1P39061 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Col18a1P39061 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col18a1P39061 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
Col18a1P39061 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Col18a1P39061 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col18a1P39061 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
Col18a1P39061 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC6.22□□□□□ -1.41
Col18a1P39061 AC153144.1-201ENSMUST00000221759 3139 ntBASIC6.22□□□□□ -1.41
Col18a1P39061 Gm37558-201ENSMUST00000193684 2983 ntBASIC6.22□□□□□ -1.41
Col18a1P39061 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
Col18a1P39061 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms