Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Col2a1P28481 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Col2a1P28481 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Col2a1P28481 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Col2a1P28481 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Col2a1P28481 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Col2a1P28481 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Col2a1P28481 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
Col2a1P28481 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC4.32□□□□□ -1.72
Col2a1P28481 Gm23753-201ENSMUST00000157575 149 ntBASIC4.32□□□□□ -1.72
Col2a1P28481 Gm28263-201ENSMUST00000185884 400 ntBASIC4.32□□□□□ -1.72
Col2a1P28481 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC4.32□□□□□ -1.72
Col2a1P28481 Olfr675-201ENSMUST00000073102 942 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Col2a1P28481 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Col2a1P28481 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Col2a1P28481 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC4.32□□□□□ -1.72
Col2a1P28481 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Col2a1P28481 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Col2a1P28481 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Col2a1P28481 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Col2a1P28481 Gm42552-201ENSMUST00000196754 4497 ntBASIC4.32□□□□□ -1.72
Col2a1P28481 Gm43313-201ENSMUST00000201398 2235 ntBASIC4.32□□□□□ -1.72
Col2a1P28481 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Col2a1P28481 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Col2a1P28481 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Col2a1P28481 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Col2a1P28481 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Col2a1P28481 AC163296.2-201ENSMUST00000220177 1315 ntBASIC4.32□□□□□ -1.72
Col2a1P28481 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Col2a1P28481 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC4.32□□□□□ -1.72
Col2a1P28481 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Col2a1P28481 Gm43613-201ENSMUST00000199409 1613 ntBASIC4.31□□□□□ -1.72
Col2a1P28481 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Col2a1P28481 Gm22115-201ENSMUST00000103976 133 ntBASIC4.31□□□□□ -1.72
Col2a1P28481 Gm23923-201ENSMUST00000104108 133 ntBASIC4.31□□□□□ -1.72
Col2a1P28481 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Col2a1P28481 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col2a1P28481 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col2a1P28481 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC4.31□□□□□ -1.72
Col2a1P28481 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC4.31□□□□□ -1.72
Col2a1P28481 Gm9435-201ENSMUST00000120379 877 ntBASIC4.31□□□□□ -1.72
Col2a1P28481 Mup-ps20-201ENSMUST00000121132 389 ntBASIC4.31□□□□□ -1.72
Col2a1P28481 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC4.31□□□□□ -1.72
Col2a1P28481 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC4.31□□□□□ -1.72
Col2a1P28481 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC4.31□□□□□ -1.72
Col2a1P28481 Gm22380-201ENSMUST00000157479 95 ntBASIC4.31□□□□□ -1.72
Col2a1P28481 Mir1934-201ENSMUST00000158127 83 ntBASIC4.31□□□□□ -1.72
Col2a1P28481 Gm25860-201ENSMUST00000158252 126 ntBASIC4.31□□□□□ -1.72
Col2a1P28481 Gm25977-201ENSMUST00000158697 85 ntBASIC4.31□□□□□ -1.72
Col2a1P28481 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Col2a1P28481 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Col2a1P28481 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Col2a1P28481 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Col2a1P28481 Gm36934-201ENSMUST00000192007 306 ntBASIC4.31□□□□□ -1.72
Col2a1P28481 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Col2a1P28481 Gm20177-201ENSMUST00000203705 334 ntBASIC4.31□□□□□ -1.72
Col2a1P28481 AC152415.1-201ENSMUST00000213320 440 ntBASIC4.31□□□□□ -1.72
Col2a1P28481 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC4.31□□□□□ -1.72
Col2a1P28481 Gm3565-201ENSMUST00000222670 609 ntBASIC4.31□□□□□ -1.72
Col2a1P28481 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC4.31□□□□□ -1.72
Col2a1P28481 CT009711.3-201ENSMUST00000225882 250 ntBASIC4.31□□□□□ -1.72
Col2a1P28481 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC4.31□□□□□ -1.72
Col2a1P28481 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Col2a1P28481 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Col2a1P28481 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Col2a1P28481 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col2a1P28481 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
Col2a1P28481 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC4.31□□□□□ -1.72
Col2a1P28481 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Col2a1P28481 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col2a1P28481 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Col2a1P28481 Gm14050-201ENSMUST00000117052 346 ntBASIC4.3□□□□□ -1.72
Col2a1P28481 Gm13650-201ENSMUST00000117729 433 ntBASIC4.3□□□□□ -1.72
Col2a1P28481 Gm11746-201ENSMUST00000119843 821 ntBASIC4.3□□□□□ -1.72
Col2a1P28481 Gm11704-201ENSMUST00000120031 214 ntBASIC4.3□□□□□ -1.72
Col2a1P28481 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Col2a1P28481 Gm21638-201ENSMUST00000179473 836 ntBASIC4.3□□□□□ -1.72
Col2a1P28481 Gm5058-201ENSMUST00000187331 463 ntBASIC4.3□□□□□ -1.72
Col2a1P28481 Gm17777-201ENSMUST00000189740 1276 ntBASIC4.3□□□□□ -1.72
Col2a1P28481 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Col2a1P28481 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC4.3□□□□□ -1.72
Col2a1P28481 AC126275.2-201ENSMUST00000225224 253 ntBASIC4.3□□□□□ -1.72
Col2a1P28481 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Col2a1P28481 Mir28a-201ENSMUST00000083560 86 ntBASIC4.3□□□□□ -1.72
Col2a1P28481 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Col2a1P28481 Gm42736-201ENSMUST00000200723 1353 ntBASIC4.3□□□□□ -1.72
Col2a1P28481 Gm43715-201ENSMUST00000196307 2715 ntBASIC4.3□□□□□ -1.72
Col2a1P28481 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
Col2a1P28481 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC4.3□□□□□ -1.72
Col2a1P28481 Gm37504-201ENSMUST00000192537 2374 ntBASIC4.3□□□□□ -1.72
Col2a1P28481 AC152981.1-201ENSMUST00000218320 2480 ntBASIC4.3□□□□□ -1.72
Col2a1P28481 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Col2a1P28481 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC4.3□□□□□ -1.72
Col2a1P28481 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Col2a1P28481 Gm42993-201ENSMUST00000196856 7325 ntBASIC4.3□□□□□ -1.72
Col2a1P28481 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Col2a1P28481 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Col2a1P28481 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Col2a1P28481 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Col2a1P28481 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms