Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm4617-201ENSMUST00000178993 331 ntBASIC3.39□□□□□ -1.87
Sdc1P18828 Gm14527-201ENSMUST00000179300 639 ntBASIC3.39□□□□□ -1.87
Sdc1P18828 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC3.39□□□□□ -1.87
Sdc1P18828 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC3.39□□□□□ -1.87
Sdc1P18828 Gm27960-201ENSMUST00000183445 184 ntBASIC3.39□□□□□ -1.87
Sdc1P18828 Mir7687-201ENSMUST00000184722 59 ntBASIC3.39□□□□□ -1.87
Sdc1P18828 Gm29031-201ENSMUST00000185316 614 ntBASIC3.39□□□□□ -1.87
Sdc1P18828 Gm29000-201ENSMUST00000185444 614 ntBASIC3.39□□□□□ -1.87
Sdc1P18828 Gm28204-201ENSMUST00000185934 614 ntBASIC3.39□□□□□ -1.87
Sdc1P18828 Gm28290-201ENSMUST00000186505 614 ntBASIC3.39□□□□□ -1.87
Sdc1P18828 Gm28161-201ENSMUST00000186669 614 ntBASIC3.39□□□□□ -1.87
Sdc1P18828 Gm28749-209ENSMUST00000189599 614 ntBASIC3.39□□□□□ -1.87
Sdc1P18828 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC3.39□□□□□ -1.87
Sdc1P18828 Gm18984-201ENSMUST00000193998 1124 ntBASIC3.39□□□□□ -1.87
Sdc1P18828 Gm33163-201ENSMUST00000194504 614 ntBASIC3.39□□□□□ -1.87
Sdc1P18828 Gm42999-201ENSMUST00000198049 786 ntBASIC3.39□□□□□ -1.87
Sdc1P18828 n-TStga1-201ENSMUST00000199903 109 ntBASIC3.39□□□□□ -1.87
Sdc1P18828 Gm43424-201ENSMUST00000200484 253 ntBASIC3.39□□□□□ -1.87
Sdc1P18828 Gm7825-201ENSMUST00000204046 416 ntBASIC3.39□□□□□ -1.87
Sdc1P18828 Gm8132-201ENSMUST00000204938 640 ntBASIC3.39□□□□□ -1.87
Sdc1P18828 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC3.39□□□□□ -1.87
Sdc1P18828 Gm45777-201ENSMUST00000213009 301 ntBASIC3.39□□□□□ -1.87
Sdc1P18828 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
Sdc1P18828 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Sdc1P18828 Gm6988-201ENSMUST00000222676 375 ntBASIC3.39□□□□□ -1.87
Sdc1P18828 Gm9202-201ENSMUST00000223036 437 ntBASIC3.39□□□□□ -1.87
Sdc1P18828 AC156803.1-201ENSMUST00000224407 820 ntBASIC3.39□□□□□ -1.87
Sdc1P18828 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC3.39□□□□□ -1.87
Sdc1P18828 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
Sdc1P18828 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Sdc1P18828 Snora31-201ENSMUST00000083213 130 ntBASIC3.39□□□□□ -1.87
Sdc1P18828 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Sdc1P18828 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Sdc1P18828 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Sdc1P18828 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Sdc1P18828 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Sdc1P18828 AC151831.1-201ENSMUST00000227609 4033 ntBASIC3.39□□□□□ -1.87
Sdc1P18828 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Sdc1P18828 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
Sdc1P18828 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Sdc1P18828 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Sdc1P18828 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
Sdc1P18828 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Sdc1P18828 Gm15161-201ENSMUST00000117340 387 ntBASIC3.38□□□□□ -1.87
Sdc1P18828 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Sdc1P18828 Gm13080-201ENSMUST00000120556 420 ntBASIC3.38□□□□□ -1.87
Sdc1P18828 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Sdc1P18828 Gm5392-201ENSMUST00000122189 789 ntBASIC3.38□□□□□ -1.87
Sdc1P18828 Gm23792-201ENSMUST00000122557 93 ntBASIC3.38□□□□□ -1.87
Sdc1P18828 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC3.38□□□□□ -1.87
Sdc1P18828 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC3.38□□□□□ -1.87
Sdc1P18828 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC3.38□□□□□ -1.87
Sdc1P18828 Gm23753-201ENSMUST00000157575 149 ntBASIC3.38□□□□□ -1.87
Sdc1P18828 Gm24930-201ENSMUST00000158315 83 ntBASIC3.38□□□□□ -1.87
Sdc1P18828 Gm25660-201ENSMUST00000158470 104 ntBASIC3.38□□□□□ -1.87
Sdc1P18828 Gm10319-202ENSMUST00000159439 846 ntBASIC3.38□□□□□ -1.87
Sdc1P18828 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC3.38□□□□□ -1.87
Sdc1P18828 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Sdc1P18828 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC3.38□□□□□ -1.87
Sdc1P18828 Gm21809-201ENSMUST00000178495 468 ntBASIC3.38□□□□□ -1.87
Sdc1P18828 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Sdc1P18828 Gm17412-201ENSMUST00000179261 468 ntBASIC3.38□□□□□ -1.87
Sdc1P18828 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Sdc1P18828 Gm27690-201ENSMUST00000184596 126 ntBASIC3.38□□□□□ -1.87
Sdc1P18828 Ighv1-3-201ENSMUST00000192764 302 ntBASIC3.38□□□□□ -1.87
Sdc1P18828 Gm43316-201ENSMUST00000197252 1295 ntBASIC3.38□□□□□ -1.87
Sdc1P18828 Gm43554-201ENSMUST00000199987 186 ntBASIC3.38□□□□□ -1.87
Sdc1P18828 Gm44048-201ENSMUST00000204531 361 ntBASIC3.38□□□□□ -1.87
Sdc1P18828 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Sdc1P18828 AC121986.1-201ENSMUST00000218588 781 ntBASIC3.38□□□□□ -1.87
Sdc1P18828 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC3.38□□□□□ -1.87
Sdc1P18828 CT030194.1-201ENSMUST00000225507 532 ntBASIC3.38□□□□□ -1.87
Sdc1P18828 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Sdc1P18828 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Sdc1P18828 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC3.38□□□□□ -1.87
Sdc1P18828 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Sdc1P18828 Uts2b-201ENSMUST00000070531 835 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Sdc1P18828 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC3.38□□□□□ -1.87
Sdc1P18828 Gm23330-201ENSMUST00000082660 164 ntBASIC3.38□□□□□ -1.87
Sdc1P18828 Mir133b-201ENSMUST00000083546 119 ntBASIC3.38□□□□□ -1.87
Sdc1P18828 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Sdc1P18828 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
Sdc1P18828 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Sdc1P18828 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Sdc1P18828 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
Sdc1P18828 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Sdc1P18828 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Sdc1P18828 Gm3972-201ENSMUST00000173960 2861 ntBASIC3.37□□□□□ -1.87
Sdc1P18828 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Sdc1P18828 Gm15670-201ENSMUST00000117740 447 ntBASIC3.37□□□□□ -1.87
Sdc1P18828 Gm15382-201ENSMUST00000118011 537 ntBASIC3.37□□□□□ -1.87
Sdc1P18828 Gm13314-201ENSMUST00000118742 335 ntBASIC3.37□□□□□ -1.87
Sdc1P18828 Gm12244-201ENSMUST00000119500 291 ntBASIC3.37□□□□□ -1.87
Sdc1P18828 Gm8200-201ENSMUST00000122390 222 ntBASIC3.37□□□□□ -1.87
Sdc1P18828 Gm11281-201ENSMUST00000141391 576 ntBASIC3.37□□□□□ -1.87
Sdc1P18828 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Sdc1P18828 Gm23539-201ENSMUST00000157537 224 ntBASIC3.37□□□□□ -1.87
Sdc1P18828 Gm23534-201ENSMUST00000157539 97 ntBASIC3.37□□□□□ -1.87
Sdc1P18828 Gm24739-201ENSMUST00000158855 292 ntBASIC3.37□□□□□ -1.87
Sdc1P18828 Gm3008-201ENSMUST00000160566 571 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms