Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm5215-201ENSMUST00000054380 405 ntBASIC3.59□□□□□ -1.83
Cdx1P18111 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Cdx1P18111 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Cdx1P18111 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Cdx1P18111 AC190403.1-201ENSMUST00000224515 1325 ntBASIC3.59□□□□□ -1.83
Cdx1P18111 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
Cdx1P18111 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
Cdx1P18111 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Cdx1P18111 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Cdx1P18111 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC3.59□□□□□ -1.84
Cdx1P18111 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
Cdx1P18111 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Cdx1P18111 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
Cdx1P18111 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Cdx1P18111 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC3.58□□□□□ -1.84
Cdx1P18111 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Cdx1P18111 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Cdx1P18111 Gm12112-201ENSMUST00000117772 231 ntBASIC3.58□□□□□ -1.84
Cdx1P18111 Gm12571-201ENSMUST00000118132 243 ntBASIC3.58□□□□□ -1.84
Cdx1P18111 Gm15357-201ENSMUST00000119160 285 ntBASIC3.58□□□□□ -1.84
Cdx1P18111 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC3.58□□□□□ -1.84
Cdx1P18111 Gm11387-201ENSMUST00000120266 772 ntBASIC3.58□□□□□ -1.84
Cdx1P18111 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Cdx1P18111 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC3.58□□□□□ -1.84
Cdx1P18111 Gm12893-201ENSMUST00000121732 275 ntBASIC3.58□□□□□ -1.84
Cdx1P18111 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Cdx1P18111 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC3.58□□□□□ -1.84
Cdx1P18111 Gm26460-201ENSMUST00000175061 126 ntBASIC3.58□□□□□ -1.84
Cdx1P18111 Gm20657-201ENSMUST00000177079 515 ntBASIC3.58□□□□□ -1.84
Cdx1P18111 Gm5777-201ENSMUST00000177265 448 ntBASIC3.58□□□□□ -1.84
Cdx1P18111 Gm27025-201ENSMUST00000182392 942 ntBASIC3.58□□□□□ -1.84
Cdx1P18111 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC3.58□□□□□ -1.84
Cdx1P18111 Gm27286-201ENSMUST00000184934 179 ntBASIC3.58□□□□□ -1.84
Cdx1P18111 Gm29105-201ENSMUST00000187256 450 ntBASIC3.58□□□□□ -1.84
Cdx1P18111 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Cdx1P18111 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Cdx1P18111 Gm28190-201ENSMUST00000189766 722 ntBASIC3.58□□□□□ -1.84
Cdx1P18111 Gm9442-201ENSMUST00000194242 319 ntBASIC3.58□□□□□ -1.84
Cdx1P18111 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Cdx1P18111 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC3.58□□□□□ -1.84
Cdx1P18111 Gm43237-201ENSMUST00000196835 1044 ntBASIC3.58□□□□□ -1.84
Cdx1P18111 Gm42451-201ENSMUST00000197410 244 ntBASIC3.58□□□□□ -1.84
Cdx1P18111 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Cdx1P18111 Gm44757-201ENSMUST00000206373 157 ntBASIC3.58□□□□□ -1.84
Cdx1P18111 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Cdx1P18111 Gm19096-201ENSMUST00000209705 766 ntBASIC3.58□□□□□ -1.84
Cdx1P18111 AC139638.1-201ENSMUST00000218027 364 ntBASIC3.58□□□□□ -1.84
Cdx1P18111 AC153975.1-201ENSMUST00000220087 926 ntBASIC3.58□□□□□ -1.84
Cdx1P18111 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC3.58□□□□□ -1.84
Cdx1P18111 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Cdx1P18111 AC155805.1-201ENSMUST00000222419 3808 ntBASIC3.58□□□□□ -1.84
Cdx1P18111 AC133910.1-201ENSMUST00000228128 624 ntBASIC3.58□□□□□ -1.84
Cdx1P18111 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC3.58□□□□□ -1.84
Cdx1P18111 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Cdx1P18111 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Cdx1P18111 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Cdx1P18111 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Cdx1P18111 Gm38091-201ENSMUST00000192418 3871 ntBASIC3.58□□□□□ -1.84
Cdx1P18111 Gm37498-201ENSMUST00000193524 4002 ntBASIC3.58□□□□□ -1.84
Cdx1P18111 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC3.58□□□□□ -1.84
Cdx1P18111 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Cdx1P18111 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC3.58□□□□□ -1.84
Cdx1P18111 Gm21854-202ENSMUST00000190391 1480 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Cdx1P18111 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC3.58□□□□□ -1.84
Cdx1P18111 Gm37478-201ENSMUST00000193624 3495 ntBASIC3.58□□□□□ -1.84
Cdx1P18111 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
Cdx1P18111 Gm37749-201ENSMUST00000193917 1899 ntBASIC3.58□□□□□ -1.84
Cdx1P18111 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Cdx1P18111 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Cdx1P18111 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Cdx1P18111 Gm44542-201ENSMUST00000208677 4314 ntBASIC3.57□□□□□ -1.84
Cdx1P18111 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Cdx1P18111 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC3.57□□□□□ -1.84
Cdx1P18111 Gm13064-201ENSMUST00000119125 557 ntBASIC3.57□□□□□ -1.84
Cdx1P18111 Gm15745-201ENSMUST00000119807 115 ntBASIC3.57□□□□□ -1.84
Cdx1P18111 Gm11623-201ENSMUST00000120176 1225 ntBASIC3.57□□□□□ -1.84
Cdx1P18111 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC3.57□□□□□ -1.84
Cdx1P18111 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Cdx1P18111 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC3.57□□□□□ -1.84
Cdx1P18111 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC3.57□□□□□ -1.84
Cdx1P18111 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Cdx1P18111 Gm23673-201ENSMUST00000157474 298 ntBASIC3.57□□□□□ -1.84
Cdx1P18111 Gm23906-201ENSMUST00000157573 128 ntBASIC3.57□□□□□ -1.84
Cdx1P18111 Gm25665-201ENSMUST00000157695 110 ntBASIC3.57□□□□□ -1.84
Cdx1P18111 Gm26034-201ENSMUST00000158154 116 ntBASIC3.57□□□□□ -1.84
Cdx1P18111 Gm15508-201ENSMUST00000160330 325 ntBASIC3.57□□□□□ -1.84
Cdx1P18111 Ear-ps7-201ENSMUST00000161287 442 ntBASIC3.57□□□□□ -1.84
Cdx1P18111 Gm17043-201ENSMUST00000164621 1283 ntBASIC3.57□□□□□ -1.84
Cdx1P18111 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
Cdx1P18111 Magea9-ps-202ENSMUST00000167328 899 ntBASIC3.57□□□□□ -1.84
Cdx1P18111 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Cdx1P18111 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Cdx1P18111 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Cdx1P18111 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC3.57□□□□□ -1.84
Cdx1P18111 Mir6975-201ENSMUST00000184879 61 ntBASIC3.57□□□□□ -1.84
Cdx1P18111 Gm28920-201ENSMUST00000189957 699 ntBASIC3.57□□□□□ -1.84
Cdx1P18111 Gm28267-201ENSMUST00000191093 265 ntBASIC3.57□□□□□ -1.84
Cdx1P18111 Gm37670-201ENSMUST00000193622 229 ntBASIC3.57□□□□□ -1.84
Cdx1P18111 Gm43350-201ENSMUST00000196382 711 ntBASIC3.57□□□□□ -1.84
Cdx1P18111 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms