Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm5612-201ENSMUST00000053326 375 ntBASIC6.03□□□□□ -1.44
RaraP11416 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
RaraP11416 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
RaraP11416 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
RaraP11416 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RaraP11416 Gm17165-201ENSMUST00000096155 493 ntBASIC6.03□□□□□ -1.44
RaraP11416 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
RaraP11416 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
RaraP11416 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RaraP11416 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RaraP11416 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RaraP11416 Gm19125-201ENSMUST00000188408 1383 ntBASIC6.03□□□□□ -1.44
RaraP11416 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC6.03□□□□□ -1.44
RaraP11416 AC124516.1-201ENSMUST00000221845 3544 ntBASIC6.03□□□□□ -1.44
RaraP11416 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
RaraP11416 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
RaraP11416 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC6.02□□□□□ -1.44
RaraP11416 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
RaraP11416 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
RaraP11416 Gm42492-201ENSMUST00000195780 2915 ntBASIC6.02□□□□□ -1.45
RaraP11416 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RaraP11416 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
RaraP11416 Gm43027-201ENSMUST00000202906 3691 ntBASIC6.02□□□□□ -1.45
RaraP11416 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC6.02□□□□□ -1.45
RaraP11416 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RaraP11416 Gm6818-201ENSMUST00000190556 2558 ntBASIC6.02□□□□□ -1.45
RaraP11416 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC6.02□□□□□ -1.45
RaraP11416 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
RaraP11416 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
RaraP11416 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
RaraP11416 Gm14790-201ENSMUST00000117760 1293 ntBASIC6.02□□□□□ -1.45
RaraP11416 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC6.02□□□□□ -1.45
RaraP11416 Gm12543-201ENSMUST00000120410 543 ntBASIC6.02□□□□□ -1.45
RaraP11416 Gm8061-201ENSMUST00000122380 350 ntBASIC6.02□□□□□ -1.45
RaraP11416 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC6.02□□□□□ -1.45
RaraP11416 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC6.02□□□□□ -1.45
RaraP11416 Gm23903-201ENSMUST00000157566 131 ntBASIC6.02□□□□□ -1.45
RaraP11416 Gm9006-201ENSMUST00000165520 841 ntBASIC6.02□□□□□ -1.45
RaraP11416 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC6.02□□□□□ -1.45
RaraP11416 Gm22932-201ENSMUST00000175510 72 ntBASIC6.02□□□□□ -1.45
RaraP11416 Mir6361-201ENSMUST00000185079 101 ntBASIC6.02□□□□□ -1.45
RaraP11416 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC6.02□□□□□ -1.45
RaraP11416 Gm8419-201ENSMUST00000189886 412 ntBASIC6.02□□□□□ -1.45
RaraP11416 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC6.02□□□□□ -1.45
RaraP11416 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC6.02□□□□□ -1.45
RaraP11416 Gm42475-201ENSMUST00000201212 295 ntBASIC6.02□□□□□ -1.45
RaraP11416 Gm45023-201ENSMUST00000207951 379 ntBASIC6.02□□□□□ -1.45
RaraP11416 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RaraP11416 Gm45402-201ENSMUST00000211796 223 ntBASIC6.02□□□□□ -1.45
RaraP11416 AC132437.1-201ENSMUST00000218308 320 ntBASIC6.02□□□□□ -1.45
RaraP11416 AC159244.1-201ENSMUST00000220964 594 ntBASIC6.02□□□□□ -1.45
RaraP11416 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC6.02□□□□□ -1.45
RaraP11416 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
RaraP11416 Gm23627-201ENSMUST00000082459 107 ntBASIC6.02□□□□□ -1.45
RaraP11416 Gm22502-201ENSMUST00000082488 107 ntBASIC6.02□□□□□ -1.45
RaraP11416 Gm24149-201ENSMUST00000082757 107 ntBASIC6.02□□□□□ -1.45
RaraP11416 Gm23679-201ENSMUST00000083161 119 ntBASIC6.02□□□□□ -1.45
RaraP11416 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC6.02□□□□□ -1.45
RaraP11416 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC6.02□□□□□ -1.45
RaraP11416 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
RaraP11416 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RaraP11416 Gm37834-201ENSMUST00000194517 3035 ntBASIC6.02□□□□□ -1.45
RaraP11416 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RaraP11416 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
RaraP11416 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
RaraP11416 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RaraP11416 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC6.02□□□□□ -1.45
RaraP11416 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
RaraP11416 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RaraP11416 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
RaraP11416 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
RaraP11416 Fam107b-209ENSMUST00000226435 3602 ntBASIC6.01□□□□□ -1.45
RaraP11416 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RaraP11416 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
RaraP11416 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
RaraP11416 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC6.01□□□□□ -1.45
RaraP11416 Gm10723-201ENSMUST00000195366 6918 ntBASIC6.01□□□□□ -1.45
RaraP11416 Gm42537-201ENSMUST00000198260 2574 ntBASIC6.01□□□□□ -1.45
RaraP11416 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC6.01□□□□□ -1.45
RaraP11416 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
RaraP11416 Gm26144-201ENSMUST00000104475 132 ntBASIC6.01□□□□□ -1.45
RaraP11416 Gm14125-201ENSMUST00000113442 680 ntBASIC6.01□□□□□ -1.45
RaraP11416 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
RaraP11416 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC6.01□□□□□ -1.45
RaraP11416 Gm11219-201ENSMUST00000118565 358 ntBASIC6.01□□□□□ -1.45
RaraP11416 Gm11902-201ENSMUST00000118849 270 ntBASIC6.01□□□□□ -1.45
RaraP11416 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
RaraP11416 Gm14472-201ENSMUST00000119815 282 ntBASIC6.01□□□□□ -1.45
RaraP11416 Gm13259-201ENSMUST00000120792 456 ntBASIC6.01□□□□□ -1.45
RaraP11416 Gm6175-201ENSMUST00000121351 400 ntBASIC6.01□□□□□ -1.45
RaraP11416 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC6.01□□□□□ -1.45
RaraP11416 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
RaraP11416 Gm23896-201ENSMUST00000158109 130 ntBASIC6.01□□□□□ -1.45
RaraP11416 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RaraP11416 Gm18343-201ENSMUST00000172802 604 ntBASIC6.01□□□□□ -1.45
RaraP11416 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC6.01□□□□□ -1.45
RaraP11416 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
RaraP11416 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
RaraP11416 Gm22851-201ENSMUST00000178741 94 ntBASIC6.01□□□□□ -1.45
RaraP11416 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms