Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm25487-201ENSMUST00000158725 125 ntBASIC5.01□□□□□ -1.61
Hoxd3P09027 Gm16353-201ENSMUST00000159458 1223 ntBASIC5.01□□□□□ -1.61
Hoxd3P09027 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC5.01□□□□□ -1.61
Hoxd3P09027 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC5.01□□□□□ -1.61
Hoxd3P09027 Gm18343-201ENSMUST00000172802 604 ntBASIC5.01□□□□□ -1.61
Hoxd3P09027 Mir5128-201ENSMUST00000175217 84 ntBASIC5.01□□□□□ -1.61
Hoxd3P09027 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Hoxd3P09027 Gm24167-201ENSMUST00000177733 124 ntBASIC5.01□□□□□ -1.61
Hoxd3P09027 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Hoxd3P09027 Gm24028-201ENSMUST00000178991 124 ntBASIC5.01□□□□□ -1.61
Hoxd3P09027 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Hoxd3P09027 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Hoxd3P09027 Gm27410-201ENSMUST00000183851 115 ntBASIC5.01□□□□□ -1.61
Hoxd3P09027 Gm21673-201ENSMUST00000186640 436 ntBASIC5.01□□□□□ -1.61
Hoxd3P09027 Gm21135-201ENSMUST00000189023 436 ntBASIC5.01□□□□□ -1.61
Hoxd3P09027 Gm3841-201ENSMUST00000191399 451 ntBASIC5.01□□□□□ -1.61
Hoxd3P09027 Gm2367-201ENSMUST00000192374 472 ntBASIC5.01□□□□□ -1.61
Hoxd3P09027 Gm412-201ENSMUST00000193360 948 ntBASIC5.01□□□□□ -1.61
Hoxd3P09027 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC5.01□□□□□ -1.61
Hoxd3P09027 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
Hoxd3P09027 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC5.01□□□□□ -1.61
Hoxd3P09027 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC5.01□□□□□ -1.61
Hoxd3P09027 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC5.01□□□□□ -1.61
Hoxd3P09027 Gm45859-201ENSMUST00000212794 214 ntBASIC5.01□□□□□ -1.61
Hoxd3P09027 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC5.01□□□□□ -1.61
Hoxd3P09027 Gm18442-201ENSMUST00000220925 639 ntBASIC5.01□□□□□ -1.61
Hoxd3P09027 AC165106.1-201ENSMUST00000227580 408 ntBASIC5.01□□□□□ -1.61
Hoxd3P09027 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
Hoxd3P09027 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Hoxd3P09027 Gm22684-201ENSMUST00000082849 132 ntBASIC5.01□□□□□ -1.61
Hoxd3P09027 Gm22358-201ENSMUST00000082877 122 ntBASIC5.01□□□□□ -1.61
Hoxd3P09027 Gm25188-201ENSMUST00000083913 122 ntBASIC5.01□□□□□ -1.61
Hoxd3P09027 Gm6990-201ENSMUST00000086830 348 ntBASIC5.01□□□□□ -1.61
Hoxd3P09027 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Hoxd3P09027 Gm19131-202ENSMUST00000203464 3208 ntBASIC5.01□□□□□ -1.61
Hoxd3P09027 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC5.01□□□□□ -1.61
Hoxd3P09027 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
Hoxd3P09027 Gm43443-201ENSMUST00000202337 2393 ntBASIC5.01□□□□□ -1.61
Hoxd3P09027 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC5.01□□□□□ -1.61
Hoxd3P09027 Gm43421-201ENSMUST00000200044 2905 ntBASIC5.01□□□□□ -1.61
Hoxd3P09027 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
Hoxd3P09027 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Hoxd3P09027 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Hoxd3P09027 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Hoxd3P09027 Gm37887-201ENSMUST00000192752 2716 ntBASIC5.01□□□□□ -1.61
Hoxd3P09027 AC147615.2-201ENSMUST00000219876 2154 ntBASIC5.01□□□□□ -1.61
Hoxd3P09027 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Hoxd3P09027 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Hoxd3P09027 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Hoxd3P09027 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Hoxd3P09027 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC5□□□□□ -1.61
Hoxd3P09027 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Hoxd3P09027 AC129085.3-201ENSMUST00000225686 1705 ntBASIC5□□□□□ -1.61
Hoxd3P09027 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC5□□□□□ -1.61
Hoxd3P09027 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC5□□□□□ -1.61
Hoxd3P09027 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Hoxd3P09027 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC5□□□□□ -1.61
Hoxd3P09027 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Hoxd3P09027 Gm43176-201ENSMUST00000199653 2989 ntBASIC5□□□□□ -1.61
Hoxd3P09027 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC5□□□□□ -1.61
Hoxd3P09027 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC5□□□□□ -1.61
Hoxd3P09027 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC5□□□□□ -1.61
Hoxd3P09027 Gm24173-201ENSMUST00000104130 128 ntBASIC5□□□□□ -1.61
Hoxd3P09027 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Hoxd3P09027 Gm14627-201ENSMUST00000118931 567 ntBASIC5□□□□□ -1.61
Hoxd3P09027 Gm14876-201ENSMUST00000120795 327 ntBASIC5□□□□□ -1.61
Hoxd3P09027 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC5□□□□□ -1.61
Hoxd3P09027 Gm13642-201ENSMUST00000121697 381 ntBASIC5□□□□□ -1.61
Hoxd3P09027 Gm12438-201ENSMUST00000122034 336 ntBASIC5□□□□□ -1.61
Hoxd3P09027 Gm15501-202ENSMUST00000140687 625 ntBASIC5□□□□□ -1.61
Hoxd3P09027 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC5□□□□□ -1.61
Hoxd3P09027 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
Hoxd3P09027 Gm23903-201ENSMUST00000157566 131 ntBASIC5□□□□□ -1.61
Hoxd3P09027 Gm26037-201ENSMUST00000158150 311 ntBASIC5□□□□□ -1.61
Hoxd3P09027 Gm23343-201ENSMUST00000158964 143 ntBASIC5□□□□□ -1.61
Hoxd3P09027 Gm37177-201ENSMUST00000193768 417 ntBASIC5□□□□□ -1.61
Hoxd3P09027 Gm43855-201ENSMUST00000197462 507 ntBASIC5□□□□□ -1.61
Hoxd3P09027 Gm42458-201ENSMUST00000201914 369 ntBASIC5□□□□□ -1.61
Hoxd3P09027 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC5□□□□□ -1.61
Hoxd3P09027 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC5□□□□□ -1.61
Hoxd3P09027 Gm44016-201ENSMUST00000203463 164 ntBASIC5□□□□□ -1.61
Hoxd3P09027 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC5□□□□□ -1.61
Hoxd3P09027 Gm44795-201ENSMUST00000205496 319 ntBASIC5□□□□□ -1.61
Hoxd3P09027 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC5□□□□□ -1.61
Hoxd3P09027 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC5□□□□□ -1.61
Hoxd3P09027 Gm17766-201ENSMUST00000209223 442 ntBASIC5□□□□□ -1.61
Hoxd3P09027 Gm45448-201ENSMUST00000211739 209 ntBASIC5□□□□□ -1.61
Hoxd3P09027 AC153557.1-201ENSMUST00000217697 403 ntBASIC5□□□□□ -1.61
Hoxd3P09027 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC5□□□□□ -1.61
Hoxd3P09027 AC130222.1-201ENSMUST00000221198 256 ntBASIC5□□□□□ -1.61
Hoxd3P09027 AC159203.2-201ENSMUST00000221326 193 ntBASIC5□□□□□ -1.61
Hoxd3P09027 Gm33654-201ENSMUST00000221704 215 ntBASIC5□□□□□ -1.61
Hoxd3P09027 AC154431.2-201ENSMUST00000225215 1055 ntBASIC5□□□□□ -1.61
Hoxd3P09027 AC154515.2-201ENSMUST00000226093 406 ntBASIC5□□□□□ -1.61
Hoxd3P09027 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC5□□□□□ -1.61
Hoxd3P09027 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC5□□□□□ -1.61
Hoxd3P09027 Gm26442-201ENSMUST00000082588 153 ntBASIC5□□□□□ -1.61
Hoxd3P09027 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC5□□□□□ -1.61
Hoxd3P09027 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC5□□□□□ -1.61
Hoxd3P09027 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC5□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms