Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 Gm8941-201ENSMUST00000181451 899 ntBASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 Gm7745-201ENSMUST00000182235 973 ntBASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 Gm27820-201ENSMUST00000183628 175 ntBASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 Gm37430-201ENSMUST00000193039 196 ntBASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 Gm43559-201ENSMUST00000198755 466 ntBASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 Gm43976-201ENSMUST00000203637 235 ntBASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 Gm44687-201ENSMUST00000204975 235 ntBASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 Gm45081-201ENSMUST00000206281 572 ntBASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 Gm35262-201ENSMUST00000215133 267 ntBASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 Gm7802-201ENSMUST00000216464 262 ntBASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 Snord59a-201ENSMUST00000082844 74 ntBASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 Mir181a-2-201ENSMUST00000083489 76 ntBASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 Gm23733-201ENSMUST00000083750 106 ntBASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 Gm8675-201ENSMUST00000201408 1856 ntBASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 Gm42537-201ENSMUST00000198260 2574 ntBASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Pcdh1F7BJK1 Gm6645-201ENSMUST00000118505 2726 ntBASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Gm20172-201ENSMUST00000193138 1551 ntBASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 AC134596.1-201ENSMUST00000222016 1922 ntBASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Gm44847-201ENSMUST00000207104 1991 ntBASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 AC140299.2-201ENSMUST00000219546 1969 ntBASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Gm20486-201ENSMUST00000101544 128 ntBASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Gm25943-201ENSMUST00000103791 90 ntBASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Mir466b-7-201ENSMUST00000103804 88 ntBASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Mir466b-5-201ENSMUST00000103900 88 ntBASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Gm25917-201ENSMUST00000104267 130 ntBASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Gm14385-201ENSMUST00000116315 876 ntBASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Gm11268-201ENSMUST00000118347 267 ntBASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Gm15381-201ENSMUST00000121501 1156 ntBASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Gm13077-201ENSMUST00000121941 484 ntBASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Gm13409-201ENSMUST00000122072 546 ntBASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Gm2020-201ENSMUST00000145242 579 ntBASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Gm8121-201ENSMUST00000153583 499 ntBASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Gm22534-201ENSMUST00000158173 104 ntBASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Gm10177-201ENSMUST00000160052 444 ntBASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Gm15914-201ENSMUST00000161922 309 ntBASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Gm27512-201ENSMUST00000175328 126 ntBASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Mir466b-4-201ENSMUST00000178801 90 ntBASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Gm25285-201ENSMUST00000178951 90 ntBASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Mir466b-6-201ENSMUST00000180061 90 ntBASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Mir466c-2-201ENSMUST00000180211 90 ntBASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Gm29781-201ENSMUST00000203862 478 ntBASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Gm44214-201ENSMUST00000204153 606 ntBASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Gm45171-201ENSMUST00000206360 736 ntBASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Gm45048-201ENSMUST00000207058 429 ntBASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Gm19900-201ENSMUST00000207285 576 ntBASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Gm45049-201ENSMUST00000207586 591 ntBASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Gm45596-201ENSMUST00000209279 434 ntBASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Gm45439-201ENSMUST00000211723 359 ntBASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 AC183268.2-201ENSMUST00000214513 446 ntBASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 AC156037.1-201ENSMUST00000221133 127 ntBASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC4.95□□□□□ -1.62
Pcdh1F7BJK1 Gm8231-201ENSMUST00000221617 783 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms