Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm12379-201ENSMUST00000119607 391 ntBASIC4.21□□□□□ -1.74
Scn3aA2ASI5 Gm12873-201ENSMUST00000119988 422 ntBASIC4.21□□□□□ -1.74
Scn3aA2ASI5 Gm9435-201ENSMUST00000120379 877 ntBASIC4.21□□□□□ -1.74
Scn3aA2ASI5 Gm14383-201ENSMUST00000121637 386 ntBASIC4.21□□□□□ -1.74
Scn3aA2ASI5 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC4.21□□□□□ -1.74
Scn3aA2ASI5 Gm25037-201ENSMUST00000175418 110 ntBASIC4.21□□□□□ -1.74
Scn3aA2ASI5 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC4.21□□□□□ -1.74
Scn3aA2ASI5 Gm44475-201ENSMUST00000204041 424 ntBASIC4.21□□□□□ -1.74
Scn3aA2ASI5 AC153544.1-201ENSMUST00000217988 400 ntBASIC4.21□□□□□ -1.74
Scn3aA2ASI5 Gm25205-201ENSMUST00000082841 103 ntBASIC4.21□□□□□ -1.74
Scn3aA2ASI5 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
Scn3aA2ASI5 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC4.21□□□□□ -1.74
Scn3aA2ASI5 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Scn3aA2ASI5 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Scn3aA2ASI5 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.21□□□□□ -1.74
Scn3aA2ASI5 Gm37363-201ENSMUST00000192336 2233 ntBASIC4.21□□□□□ -1.74
Scn3aA2ASI5 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC4.21□□□□□ -1.74
Scn3aA2ASI5 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Scn3aA2ASI5 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Scn3aA2ASI5 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Scn3aA2ASI5 Gm14050-201ENSMUST00000117052 346 ntBASIC4.21□□□□□ -1.74
Scn3aA2ASI5 Gm14621-201ENSMUST00000117709 689 ntBASIC4.21□□□□□ -1.74
Scn3aA2ASI5 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Scn3aA2ASI5 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC4.21□□□□□ -1.74
Scn3aA2ASI5 Gm24059-201ENSMUST00000157493 312 ntBASIC4.21□□□□□ -1.74
Scn3aA2ASI5 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Scn3aA2ASI5 Gm28148-201ENSMUST00000186924 697 ntBASIC4.21□□□□□ -1.74
Scn3aA2ASI5 Gm42666-201ENSMUST00000201954 152 ntBASIC4.21□□□□□ -1.74
Scn3aA2ASI5 Gm43039-201ENSMUST00000202883 963 ntBASIC4.21□□□□□ -1.74
Scn3aA2ASI5 Gm8774-201ENSMUST00000203621 692 ntBASIC4.21□□□□□ -1.74
Scn3aA2ASI5 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
Scn3aA2ASI5 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC4.21□□□□□ -1.74
Scn3aA2ASI5 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
Scn3aA2ASI5 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Scn3aA2ASI5 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC4.2□□□□□ -1.74
Scn3aA2ASI5 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
Scn3aA2ASI5 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Scn3aA2ASI5 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Scn3aA2ASI5 Gm43883-201ENSMUST00000204002 3750 ntBASIC4.2□□□□□ -1.74
Scn3aA2ASI5 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Scn3aA2ASI5 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC4.2□□□□□ -1.74
Scn3aA2ASI5 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Scn3aA2ASI5 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Scn3aA2ASI5 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Scn3aA2ASI5 Gm24935-201ENSMUST00000103770 110 ntBASIC4.2□□□□□ -1.74
Scn3aA2ASI5 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Scn3aA2ASI5 Gm15060-201ENSMUST00000119550 948 ntBASIC4.2□□□□□ -1.74
Scn3aA2ASI5 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
Scn3aA2ASI5 Gm22116-201ENSMUST00000158791 141 ntBASIC4.2□□□□□ -1.74
Scn3aA2ASI5 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC4.2□□□□□ -1.74
Scn3aA2ASI5 Gm43276-201ENSMUST00000199712 364 ntBASIC4.2□□□□□ -1.74
Scn3aA2ASI5 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Scn3aA2ASI5 AC153948.1-201ENSMUST00000219080 3838 ntBASIC4.2□□□□□ -1.74
Scn3aA2ASI5 Gm22155-201ENSMUST00000083836 162 ntBASIC4.2□□□□□ -1.74
Scn3aA2ASI5 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Scn3aA2ASI5 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Scn3aA2ASI5 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Scn3aA2ASI5 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC4.2□□□□□ -1.74
Scn3aA2ASI5 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Scn3aA2ASI5 Gm44800-201ENSMUST00000207510 1855 ntBASIC4.2□□□□□ -1.74
Scn3aA2ASI5 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Scn3aA2ASI5 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Scn3aA2ASI5 Gm38032-201ENSMUST00000195052 1589 ntBASIC4.19□□□□□ -1.74
Scn3aA2ASI5 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Scn3aA2ASI5 Gm13607-201ENSMUST00000117875 539 ntBASIC4.19□□□□□ -1.74
Scn3aA2ASI5 Gm13118-201ENSMUST00000120402 549 ntBASIC4.19□□□□□ -1.74
Scn3aA2ASI5 Gm16005-201ENSMUST00000120515 269 ntBASIC4.19□□□□□ -1.74
Scn3aA2ASI5 Gm14845-201ENSMUST00000121259 306 ntBASIC4.19□□□□□ -1.74
Scn3aA2ASI5 Gm12005-201ENSMUST00000121451 379 ntBASIC4.19□□□□□ -1.74
Scn3aA2ASI5 Gm22380-201ENSMUST00000157479 95 ntBASIC4.19□□□□□ -1.74
Scn3aA2ASI5 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC4.19□□□□□ -1.74
Scn3aA2ASI5 Gm28975-201ENSMUST00000186412 686 ntBASIC4.19□□□□□ -1.74
Scn3aA2ASI5 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Scn3aA2ASI5 Gm18698-201ENSMUST00000192327 668 ntBASIC4.19□□□□□ -1.74
Scn3aA2ASI5 Gm18330-201ENSMUST00000199246 547 ntBASIC4.19□□□□□ -1.74
Scn3aA2ASI5 Gm7041-201ENSMUST00000201227 524 ntBASIC4.19□□□□□ -1.74
Scn3aA2ASI5 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC4.19□□□□□ -1.74
Scn3aA2ASI5 AC134439.2-201ENSMUST00000221950 467 ntBASIC4.19□□□□□ -1.74
Scn3aA2ASI5 AC133101.1-201ENSMUST00000226939 1199 ntBASIC4.19□□□□□ -1.74
Scn3aA2ASI5 AC166369.1-201ENSMUST00000228126 351 ntBASIC4.19□□□□□ -1.74
Scn3aA2ASI5 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Scn3aA2ASI5 Gm8724-201ENSMUST00000081668 483 ntBASIC4.19□□□□□ -1.74
Scn3aA2ASI5 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Scn3aA2ASI5 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Scn3aA2ASI5 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Scn3aA2ASI5 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Scn3aA2ASI5 AC163296.2-201ENSMUST00000220177 1315 ntBASIC4.19□□□□□ -1.74
Scn3aA2ASI5 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Scn3aA2ASI5 Gm43648-201ENSMUST00000197775 2485 ntBASIC4.19□□□□□ -1.74
Scn3aA2ASI5 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC4.19□□□□□ -1.74
Scn3aA2ASI5 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC4.19□□□□□ -1.74
Scn3aA2ASI5 Gm13459-201ENSMUST00000121558 646 ntBASIC4.19□□□□□ -1.74
Scn3aA2ASI5 Gm23865-201ENSMUST00000157723 97 ntBASIC4.19□□□□□ -1.74
Scn3aA2ASI5 Gm25860-201ENSMUST00000158252 126 ntBASIC4.19□□□□□ -1.74
Scn3aA2ASI5 Gm28118-201ENSMUST00000185957 294 ntBASIC4.19□□□□□ -1.74
Scn3aA2ASI5 Gm6680-201ENSMUST00000192789 950 ntBASIC4.19□□□□□ -1.74
Scn3aA2ASI5 Gm42458-201ENSMUST00000201914 369 ntBASIC4.19□□□□□ -1.74
Scn3aA2ASI5 AC117237.1-201ENSMUST00000224035 395 ntBASIC4.19□□□□□ -1.74
Scn3aA2ASI5 CT009711.3-201ENSMUST00000225882 250 ntBASIC4.19□□□□□ -1.74
Scn3aA2ASI5 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms