Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC3.83□□□□□ -1.8
Trem1Q9JKE2 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Trem1Q9JKE2 Gm45324-201ENSMUST00000211193 5638 ntBASIC3.83□□□□□ -1.8
Trem1Q9JKE2 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Trem1Q9JKE2 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
Trem1Q9JKE2 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
Trem1Q9JKE2 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Trem1Q9JKE2 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC3.82□□□□□ -1.8
Trem1Q9JKE2 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
Trem1Q9JKE2 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
Trem1Q9JKE2 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Trem1Q9JKE2 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Trem1Q9JKE2 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Trem1Q9JKE2 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Trem1Q9JKE2 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Trem1Q9JKE2 AC153522.2-201ENSMUST00000218389 3853 ntBASIC3.82□□□□□ -1.8
Trem1Q9JKE2 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Trem1Q9JKE2 Gm14050-201ENSMUST00000117052 346 ntBASIC3.82□□□□□ -1.8
Trem1Q9JKE2 Gm13155-201ENSMUST00000119277 646 ntBASIC3.82□□□□□ -1.8
Trem1Q9JKE2 Gm11718-201ENSMUST00000119942 537 ntBASIC3.82□□□□□ -1.8
Trem1Q9JKE2 Gm12768-201ENSMUST00000120055 759 ntBASIC3.82□□□□□ -1.8
Trem1Q9JKE2 Gm8178-201ENSMUST00000121570 646 ntBASIC3.82□□□□□ -1.8
Trem1Q9JKE2 Gm12854-201ENSMUST00000128518 297 ntBASIC3.82□□□□□ -1.8
Trem1Q9JKE2 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Trem1Q9JKE2 Gm24343-201ENSMUST00000158708 111 ntBASIC3.82□□□□□ -1.8
Trem1Q9JKE2 Gm7152-201ENSMUST00000163570 605 ntBASIC3.82□□□□□ -1.8
Trem1Q9JKE2 Gm8214-201ENSMUST00000172123 351 ntBASIC3.82□□□□□ -1.8
Trem1Q9JKE2 Gm6214-201ENSMUST00000178845 541 ntBASIC3.82□□□□□ -1.8
Trem1Q9JKE2 Gm29793-201ENSMUST00000202874 460 ntBASIC3.82□□□□□ -1.8
Trem1Q9JKE2 Gm44402-201ENSMUST00000203677 238 ntBASIC3.82□□□□□ -1.8
Trem1Q9JKE2 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Trem1Q9JKE2 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Trem1Q9JKE2 Gm17779-201ENSMUST00000213395 394 ntBASIC3.82□□□□□ -1.8
Trem1Q9JKE2 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC3.82□□□□□ -1.8
Trem1Q9JKE2 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
Trem1Q9JKE2 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Trem1Q9JKE2 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC3.82□□□□□ -1.8
Trem1Q9JKE2 AC125399.1-201ENSMUST00000224236 595 ntBASIC3.82□□□□□ -1.8
Trem1Q9JKE2 AC117797.2-201ENSMUST00000224419 531 ntBASIC3.82□□□□□ -1.8
Trem1Q9JKE2 AC154738.2-201ENSMUST00000227403 1110 ntBASIC3.82□□□□□ -1.8
Trem1Q9JKE2 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Trem1Q9JKE2 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Trem1Q9JKE2 Gm7665-201ENSMUST00000076710 297 ntBASIC3.82□□□□□ -1.8
Trem1Q9JKE2 Olfr1053-201ENSMUST00000099897 942 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Trem1Q9JKE2 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.82□□□□□ -1.8
Trem1Q9JKE2 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Trem1Q9JKE2 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
Trem1Q9JKE2 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Trem1Q9JKE2 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Trem1Q9JKE2 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC3.81□□□□□ -1.8
Trem1Q9JKE2 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Trem1Q9JKE2 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
Trem1Q9JKE2 Gm6215-201ENSMUST00000119297 1386 ntBASIC3.81□□□□□ -1.8
Trem1Q9JKE2 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Trem1Q9JKE2 Gm25758-201ENSMUST00000103987 129 ntBASIC3.81□□□□□ -1.8
Trem1Q9JKE2 Gm24230-201ENSMUST00000104313 129 ntBASIC3.81□□□□□ -1.8
Trem1Q9JKE2 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Trem1Q9JKE2 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC3.81□□□□□ -1.8
Trem1Q9JKE2 Gm15367-201ENSMUST00000122398 1016 ntBASIC3.81□□□□□ -1.8
Trem1Q9JKE2 Gm22107-201ENSMUST00000122548 100 ntBASIC3.81□□□□□ -1.8
Trem1Q9JKE2 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Trem1Q9JKE2 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC3.81□□□□□ -1.8
Trem1Q9JKE2 Gm28594-201ENSMUST00000187022 661 ntBASIC3.81□□□□□ -1.8
Trem1Q9JKE2 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC3.81□□□□□ -1.8
Trem1Q9JKE2 Gm37601-201ENSMUST00000194922 394 ntBASIC3.81□□□□□ -1.8
Trem1Q9JKE2 Gm17987-201ENSMUST00000206902 603 ntBASIC3.81□□□□□ -1.8
Trem1Q9JKE2 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC3.81□□□□□ -1.8
Trem1Q9JKE2 Gm45660-201ENSMUST00000210267 151 ntBASIC3.81□□□□□ -1.8
Trem1Q9JKE2 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.81□□□□□ -1.8
Trem1Q9JKE2 AC159380.1-201ENSMUST00000218096 121 ntBASIC3.81□□□□□ -1.8
Trem1Q9JKE2 AC139294.2-201ENSMUST00000227159 285 ntBASIC3.81□□□□□ -1.8
Trem1Q9JKE2 Gm4963-201ENSMUST00000072718 378 ntBASIC3.81□□□□□ -1.8
Trem1Q9JKE2 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Trem1Q9JKE2 Gm25187-201ENSMUST00000083906 133 ntBASIC3.81□□□□□ -1.8
Trem1Q9JKE2 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Trem1Q9JKE2 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
Trem1Q9JKE2 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
Trem1Q9JKE2 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Trem1Q9JKE2 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Trem1Q9JKE2 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Trem1Q9JKE2 Gm37625-201ENSMUST00000194969 4872 ntBASIC3.81□□□□□ -1.8
Trem1Q9JKE2 Olfr1082-201ENSMUST00000215600 1620 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
Trem1Q9JKE2 Gm32444-201ENSMUST00000195147 3511 ntBASIC3.81□□□□□ -1.8
Trem1Q9JKE2 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.8□□□□□ -1.8
Trem1Q9JKE2 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Trem1Q9JKE2 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Trem1Q9JKE2 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Trem1Q9JKE2 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.8□□□□□ -1.8
Trem1Q9JKE2 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Trem1Q9JKE2 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Trem1Q9JKE2 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
Trem1Q9JKE2 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
Trem1Q9JKE2 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
Trem1Q9JKE2 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Trem1Q9JKE2 Gm15382-201ENSMUST00000118011 537 ntBASIC3.8□□□□□ -1.8
Trem1Q9JKE2 Gm12244-201ENSMUST00000119500 291 ntBASIC3.8□□□□□ -1.8
Trem1Q9JKE2 Gm14119-201ENSMUST00000119511 235 ntBASIC3.8□□□□□ -1.8
Trem1Q9JKE2 Gm12587-201ENSMUST00000120180 427 ntBASIC3.8□□□□□ -1.8
Trem1Q9JKE2 Gm13488-201ENSMUST00000120419 179 ntBASIC3.8□□□□□ -1.8
Trem1Q9JKE2 Gm12001-201ENSMUST00000121727 913 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms