Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Smc1aQ9CU62 Gm11698-201ENSMUST00000117948 455 ntBASIC4.77□□□□□ -1.65
Smc1aQ9CU62 Gm14559-201ENSMUST00000121745 496 ntBASIC4.77□□□□□ -1.65
Smc1aQ9CU62 Gm13487-201ENSMUST00000122240 864 ntBASIC4.77□□□□□ -1.65
Smc1aQ9CU62 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Smc1aQ9CU62 Gm24745-201ENSMUST00000157840 85 ntBASIC4.77□□□□□ -1.65
Smc1aQ9CU62 Gm24898-201ENSMUST00000158133 106 ntBASIC4.77□□□□□ -1.65
Smc1aQ9CU62 Gm6245-201ENSMUST00000164699 768 ntBASIC4.77□□□□□ -1.65
Smc1aQ9CU62 Gm6214-201ENSMUST00000178845 541 ntBASIC4.77□□□□□ -1.65
Smc1aQ9CU62 Gm27427-201ENSMUST00000185134 193 ntBASIC4.77□□□□□ -1.65
Smc1aQ9CU62 Gm28924-201ENSMUST00000190012 241 ntBASIC4.77□□□□□ -1.65
Smc1aQ9CU62 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC4.77□□□□□ -1.65
Smc1aQ9CU62 Gm38053-201ENSMUST00000193938 160 ntBASIC4.77□□□□□ -1.65
Smc1aQ9CU62 Gm17954-201ENSMUST00000195893 607 ntBASIC4.77□□□□□ -1.65
Smc1aQ9CU62 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Smc1aQ9CU62 AC133598.4-202ENSMUST00000225267 469 ntBASIC4.77□□□□□ -1.65
Smc1aQ9CU62 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Smc1aQ9CU62 Mir383-201ENSMUST00000083523 70 ntBASIC4.77□□□□□ -1.65
Smc1aQ9CU62 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
Smc1aQ9CU62 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Smc1aQ9CU62 Gm13058-201ENSMUST00000117097 1435 ntBASIC4.77□□□□□ -1.65
Smc1aQ9CU62 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
Smc1aQ9CU62 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Smc1aQ9CU62 Gm43658-201ENSMUST00000202348 4176 ntBASIC4.76□□□□□ -1.65
Smc1aQ9CU62 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Smc1aQ9CU62 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Smc1aQ9CU62 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Smc1aQ9CU62 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
Smc1aQ9CU62 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC4.76□□□□□ -1.65
Smc1aQ9CU62 Gm26367-201ENSMUST00000104165 132 ntBASIC4.76□□□□□ -1.65
Smc1aQ9CU62 Gm13501-201ENSMUST00000118477 979 ntBASIC4.76□□□□□ -1.65
Smc1aQ9CU62 Klra11-ps-201ENSMUST00000122033 810 ntBASIC4.76□□□□□ -1.65
Smc1aQ9CU62 Gm22204-201ENSMUST00000122654 327 ntBASIC4.76□□□□□ -1.65
Smc1aQ9CU62 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC4.76□□□□□ -1.65
Smc1aQ9CU62 Gm23499-201ENSMUST00000157736 268 ntBASIC4.76□□□□□ -1.65
Smc1aQ9CU62 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC4.76□□□□□ -1.65
Smc1aQ9CU62 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC4.76□□□□□ -1.65
Smc1aQ9CU62 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC4.76□□□□□ -1.65
Smc1aQ9CU62 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC4.76□□□□□ -1.65
Smc1aQ9CU62 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC4.76□□□□□ -1.65
Smc1aQ9CU62 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC4.76□□□□□ -1.65
Smc1aQ9CU62 Gm44543-201ENSMUST00000209136 396 ntBASIC4.76□□□□□ -1.65
Smc1aQ9CU62 Gm45458-201ENSMUST00000209900 522 ntBASIC4.76□□□□□ -1.65
Smc1aQ9CU62 AC153526.4-201ENSMUST00000217713 379 ntBASIC4.76□□□□□ -1.65
Smc1aQ9CU62 Gm19599-201ENSMUST00000218898 358 ntBASIC4.76□□□□□ -1.65
Smc1aQ9CU62 Gm9616-201ENSMUST00000221154 781 ntBASIC4.76□□□□□ -1.65
Smc1aQ9CU62 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Smc1aQ9CU62 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Smc1aQ9CU62 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Smc1aQ9CU62 Olfr846-201ENSMUST00000078774 942 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Smc1aQ9CU62 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Smc1aQ9CU62 Gm26449-201ENSMUST00000082452 104 ntBASIC4.76□□□□□ -1.65
Smc1aQ9CU62 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Smc1aQ9CU62 Gm43990-201ENSMUST00000203790 1691 ntBASIC4.76□□□□□ -1.65
Smc1aQ9CU62 AC142245.1-201ENSMUST00000226611 1505 ntBASIC4.76□□□□□ -1.65
Smc1aQ9CU62 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Smc1aQ9CU62 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Smc1aQ9CU62 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Smc1aQ9CU62 Gm42717-201ENSMUST00000197309 3463 ntBASIC4.76□□□□□ -1.65
Smc1aQ9CU62 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Smc1aQ9CU62 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Smc1aQ9CU62 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
Smc1aQ9CU62 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Smc1aQ9CU62 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
Smc1aQ9CU62 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC4.75□□□□□ -1.65
Smc1aQ9CU62 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC4.75□□□□□ -1.65
Smc1aQ9CU62 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Smc1aQ9CU62 Gm23942-201ENSMUST00000101956 107 ntBASIC4.75□□□□□ -1.65
Smc1aQ9CU62 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Smc1aQ9CU62 Gm14771-201ENSMUST00000118249 203 ntBASIC4.75□□□□□ -1.65
Smc1aQ9CU62 Gm11719-201ENSMUST00000119399 351 ntBASIC4.75□□□□□ -1.65
Smc1aQ9CU62 Gm13788-201ENSMUST00000120767 601 ntBASIC4.75□□□□□ -1.65
Smc1aQ9CU62 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC4.75□□□□□ -1.65
Smc1aQ9CU62 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC4.75□□□□□ -1.65
Smc1aQ9CU62 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Smc1aQ9CU62 Gm23743-201ENSMUST00000157389 274 ntBASIC4.75□□□□□ -1.65
Smc1aQ9CU62 Gm25386-201ENSMUST00000157814 288 ntBASIC4.75□□□□□ -1.65
Smc1aQ9CU62 Gm26001-201ENSMUST00000157989 103 ntBASIC4.75□□□□□ -1.65
Smc1aQ9CU62 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Smc1aQ9CU62 Mir5134-201ENSMUST00000175529 78 ntBASIC4.75□□□□□ -1.65
Smc1aQ9CU62 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Smc1aQ9CU62 Gm11394-201ENSMUST00000181421 517 ntBASIC4.75□□□□□ -1.65
Smc1aQ9CU62 Gm5309-201ENSMUST00000197416 677 ntBASIC4.75□□□□□ -1.65
Smc1aQ9CU62 Gm45523-201ENSMUST00000210712 799 ntBASIC4.75□□□□□ -1.65
Smc1aQ9CU62 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Smc1aQ9CU62 Gm17779-201ENSMUST00000213395 394 ntBASIC4.75□□□□□ -1.65
Smc1aQ9CU62 Gm46190-201ENSMUST00000219650 427 ntBASIC4.75□□□□□ -1.65
Smc1aQ9CU62 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC4.75□□□□□ -1.65
Smc1aQ9CU62 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC4.75□□□□□ -1.65
Smc1aQ9CU62 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Smc1aQ9CU62 Mir26a-2-201ENSMUST00000083496 84 ntBASIC4.75□□□□□ -1.65
Smc1aQ9CU62 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
Smc1aQ9CU62 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Smc1aQ9CU62 Gm42486-201ENSMUST00000200369 3486 ntBASIC4.75□□□□□ -1.65
Smc1aQ9CU62 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Smc1aQ9CU62 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Smc1aQ9CU62 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Smc1aQ9CU62 Gm38057-201ENSMUST00000195551 3203 ntBASIC4.74□□□□□ -1.65
Smc1aQ9CU62 Gm38065-201ENSMUST00000193147 3492 ntBASIC4.74□□□□□ -1.65
Smc1aQ9CU62 Gm43341-201ENSMUST00000200104 1308 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 99.4 ms