Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 AC160016.1-201ENSMUST00000215589 448 ntBASIC6.29□□□□□ -1.4
Trim11Q99PQ2 AC153912.2-201ENSMUST00000215840 2015 ntBASIC6.29□□□□□ -1.4
Trim11Q99PQ2 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC6.29□□□□□ -1.4
Trim11Q99PQ2 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC6.29□□□□□ -1.4
Trim11Q99PQ2 AC153924.1-201ENSMUST00000220117 312 ntBASIC6.29□□□□□ -1.4
Trim11Q99PQ2 AC124732.4-201ENSMUST00000220930 1274 ntBASIC6.29□□□□□ -1.4
Trim11Q99PQ2 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Trim11Q99PQ2 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC6.29□□□□□ -1.4
Trim11Q99PQ2 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Trim11Q99PQ2 Gm26056-201ENSMUST00000083043 104 ntBASIC6.29□□□□□ -1.4
Trim11Q99PQ2 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trim11Q99PQ2 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC6.29□□□□□ -1.4
Trim11Q99PQ2 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC6.29□□□□□ -1.4
Trim11Q99PQ2 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
Trim11Q99PQ2 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim11Q99PQ2 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trim11Q99PQ2 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC6.29□□□□□ -1.4
Trim11Q99PQ2 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trim11Q99PQ2 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Trim11Q99PQ2 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim11Q99PQ2 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
Trim11Q99PQ2 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
Trim11Q99PQ2 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim11Q99PQ2 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim11Q99PQ2 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Trim11Q99PQ2 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC6.28□□□□□ -1.4
Trim11Q99PQ2 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim11Q99PQ2 AC115760.1-201ENSMUST00000225160 1327 ntBASIC6.28□□□□□ -1.4
Trim11Q99PQ2 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
Trim11Q99PQ2 Gm38190-201ENSMUST00000192350 4755 ntBASIC6.28□□□□□ -1.4
Trim11Q99PQ2 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim11Q99PQ2 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim11Q99PQ2 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC6.28□□□□□ -1.4
Trim11Q99PQ2 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Trim11Q99PQ2 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Trim11Q99PQ2 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim11Q99PQ2 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Trim11Q99PQ2 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC6.28□□□□□ -1.4
Trim11Q99PQ2 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC6.28□□□□□ -1.4
Trim11Q99PQ2 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Trim11Q99PQ2 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim11Q99PQ2 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
Trim11Q99PQ2 Mir466f-4-201ENSMUST00000116930 121 ntBASIC6.28□□□□□ -1.4
Trim11Q99PQ2 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Trim11Q99PQ2 Gm14901-201ENSMUST00000119001 283 ntBASIC6.28□□□□□ -1.4
Trim11Q99PQ2 Gm11794-201ENSMUST00000119446 237 ntBASIC6.28□□□□□ -1.4
Trim11Q99PQ2 Gm12110-201ENSMUST00000121601 579 ntBASIC6.28□□□□□ -1.4
Trim11Q99PQ2 Gm22208-201ENSMUST00000122658 110 ntBASIC6.28□□□□□ -1.4
Trim11Q99PQ2 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
Trim11Q99PQ2 Gm24435-201ENSMUST00000157886 110 ntBASIC6.28□□□□□ -1.4
Trim11Q99PQ2 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC6.28□□□□□ -1.4
Trim11Q99PQ2 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim11Q99PQ2 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Trim11Q99PQ2 Gm17929-201ENSMUST00000186851 627 ntBASIC6.28□□□□□ -1.4
Trim11Q99PQ2 Gm28061-201ENSMUST00000189085 807 ntBASIC6.28□□□□□ -1.4
Trim11Q99PQ2 Gm29376-201ENSMUST00000189357 835 ntBASIC6.28□□□□□ -1.4
Trim11Q99PQ2 Gm37609-201ENSMUST00000191778 678 ntBASIC6.28□□□□□ -1.4
Trim11Q99PQ2 Gm6074-201ENSMUST00000193340 451 ntBASIC6.28□□□□□ -1.4
Trim11Q99PQ2 Gm37375-201ENSMUST00000193859 387 ntBASIC6.28□□□□□ -1.4
Trim11Q99PQ2 Gm37385-201ENSMUST00000195223 387 ntBASIC6.28□□□□□ -1.4
Trim11Q99PQ2 Gm5983-201ENSMUST00000197739 770 ntBASIC6.28□□□□□ -1.4
Trim11Q99PQ2 Gm44360-201ENSMUST00000200081 82 ntBASIC6.28□□□□□ -1.4
Trim11Q99PQ2 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Trim11Q99PQ2 Gm43798-201ENSMUST00000202056 394 ntBASIC6.28□□□□□ -1.4
Trim11Q99PQ2 Gm2040-201ENSMUST00000202979 289 ntBASIC6.28□□□□□ -1.4
Trim11Q99PQ2 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC6.28□□□□□ -1.4
Trim11Q99PQ2 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC6.28□□□□□ -1.4
Trim11Q99PQ2 Gm33178-201ENSMUST00000212090 257 ntBASIC6.28□□□□□ -1.4
Trim11Q99PQ2 AL669916.3-201ENSMUST00000213855 94 ntBASIC6.28□□□□□ -1.4
Trim11Q99PQ2 AL669916.6-201ENSMUST00000214610 94 ntBASIC6.28□□□□□ -1.4
Trim11Q99PQ2 AL669916.4-201ENSMUST00000215976 94 ntBASIC6.28□□□□□ -1.4
Trim11Q99PQ2 AL669916.1-201ENSMUST00000217640 94 ntBASIC6.28□□□□□ -1.4
Trim11Q99PQ2 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC6.28□□□□□ -1.4
Trim11Q99PQ2 AC134917.2-201ENSMUST00000223354 124 ntBASIC6.28□□□□□ -1.4
Trim11Q99PQ2 AC154271.1-201ENSMUST00000224780 383 ntBASIC6.28□□□□□ -1.4
Trim11Q99PQ2 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim11Q99PQ2 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Trim11Q99PQ2 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim11Q99PQ2 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC6.28□□□□□ -1.4
Trim11Q99PQ2 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Trim11Q99PQ2 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Trim11Q99PQ2 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim11Q99PQ2 Gm45577-201ENSMUST00000210206 2287 ntBASIC6.28□□□□□ -1.4
Trim11Q99PQ2 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC6.28□□□□□ -1.4
Trim11Q99PQ2 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Trim11Q99PQ2 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
Trim11Q99PQ2 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
Trim11Q99PQ2 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Trim11Q99PQ2 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
Trim11Q99PQ2 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Trim11Q99PQ2 Abcc2-202ENSMUST00000099413 1926 ntBASIC6.27□□□□□ -1.41
Trim11Q99PQ2 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Trim11Q99PQ2 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
Trim11Q99PQ2 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Trim11Q99PQ2 Gm43437-201ENSMUST00000198535 3955 ntBASIC6.27□□□□□ -1.41
Trim11Q99PQ2 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Trim11Q99PQ2 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC6.27□□□□□ -1.41
Trim11Q99PQ2 Gm22372-201ENSMUST00000104589 136 ntBASIC6.27□□□□□ -1.41
Trim11Q99PQ2 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Trim11Q99PQ2 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 103.2 ms