Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Igkv15-101-201ENSMUST00000195917 299 ntBASIC6.09□□□□□ -1.43
Clp1Q99LI9 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm45171-201ENSMUST00000206360 736 ntBASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm5735-201ENSMUST00000207053 167 ntBASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm6009-201ENSMUST00000210848 280 ntBASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm45910-201ENSMUST00000212493 1003 ntBASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm9068-201ENSMUST00000217393 455 ntBASIC6.09□□□□□ -1.43
Clp1Q99LI9 AC091783.2-201ENSMUST00000224626 740 ntBASIC6.09□□□□□ -1.43
Clp1Q99LI9 AC126275.2-201ENSMUST00000225224 253 ntBASIC6.09□□□□□ -1.43
Clp1Q99LI9 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm22807-201ENSMUST00000082737 129 ntBASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm25008-201ENSMUST00000083809 81 ntBASIC6.09□□□□□ -1.43
Clp1Q99LI9 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm22365-201ENSMUST00000093750 117 ntBASIC6.09□□□□□ -1.43
Clp1Q99LI9 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC6.09□□□□□ -1.43
Clp1Q99LI9 AC139754.3-201ENSMUST00000220444 1627 ntBASIC6.09□□□□□ -1.43
Clp1Q99LI9 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Clp1Q99LI9 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Clp1Q99LI9 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
Clp1Q99LI9 Gm43577-201ENSMUST00000197090 3344 ntBASIC6.09□□□□□ -1.44
Clp1Q99LI9 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Clp1Q99LI9 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
Clp1Q99LI9 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Clp1Q99LI9 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Clp1Q99LI9 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Clp1Q99LI9 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC6.08□□□□□ -1.44
Clp1Q99LI9 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC6.08□□□□□ -1.44
Clp1Q99LI9 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC6.08□□□□□ -1.44
Clp1Q99LI9 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Clp1Q99LI9 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Clp1Q99LI9 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Clp1Q99LI9 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC6.08□□□□□ -1.44
Clp1Q99LI9 Abcc2-202ENSMUST00000099413 1926 ntBASIC6.08□□□□□ -1.44
Clp1Q99LI9 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Clp1Q99LI9 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC6.08□□□□□ -1.44
Clp1Q99LI9 Gm26396-201ENSMUST00000104093 132 ntBASIC6.08□□□□□ -1.44
Clp1Q99LI9 Gm23744-201ENSMUST00000104231 149 ntBASIC6.08□□□□□ -1.44
Clp1Q99LI9 Gm13311-201ENSMUST00000117863 379 ntBASIC6.08□□□□□ -1.44
Clp1Q99LI9 Gm11830-201ENSMUST00000120175 561 ntBASIC6.08□□□□□ -1.44
Clp1Q99LI9 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Clp1Q99LI9 Gm22084-201ENSMUST00000157585 105 ntBASIC6.08□□□□□ -1.44
Clp1Q99LI9 Gm23124-201ENSMUST00000157650 107 ntBASIC6.08□□□□□ -1.44
Clp1Q99LI9 Gm26312-201ENSMUST00000157769 165 ntBASIC6.08□□□□□ -1.44
Clp1Q99LI9 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC6.08□□□□□ -1.44
Clp1Q99LI9 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC6.08□□□□□ -1.44
Clp1Q99LI9 Gm23144-201ENSMUST00000180226 107 ntBASIC6.08□□□□□ -1.44
Clp1Q99LI9 Mir7087-201ENSMUST00000184840 70 ntBASIC6.08□□□□□ -1.44
Clp1Q99LI9 Gm28390-201ENSMUST00000185212 700 ntBASIC6.08□□□□□ -1.44
Clp1Q99LI9 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC6.08□□□□□ -1.44
Clp1Q99LI9 Gm29490-201ENSMUST00000190923 342 ntBASIC6.08□□□□□ -1.44
Clp1Q99LI9 Gm42758-201ENSMUST00000202146 283 ntBASIC6.08□□□□□ -1.44
Clp1Q99LI9 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Clp1Q99LI9 Gm6112-201ENSMUST00000208037 629 ntBASIC6.08□□□□□ -1.44
Clp1Q99LI9 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC6.08□□□□□ -1.44
Clp1Q99LI9 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC6.08□□□□□ -1.44
Clp1Q99LI9 AC158641.1-201ENSMUST00000218933 229 ntBASIC6.08□□□□□ -1.44
Clp1Q99LI9 Gm20368-201ENSMUST00000220716 301 ntBASIC6.08□□□□□ -1.44
Clp1Q99LI9 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC6.08□□□□□ -1.44
Clp1Q99LI9 Gm11360-201ENSMUST00000221898 262 ntBASIC6.08□□□□□ -1.44
Clp1Q99LI9 AC129085.4-201ENSMUST00000224536 570 ntBASIC6.08□□□□□ -1.44
Clp1Q99LI9 AC124549.1-201ENSMUST00000225912 333 ntBASIC6.08□□□□□ -1.44
Clp1Q99LI9 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Clp1Q99LI9 Gm22508-201ENSMUST00000082772 110 ntBASIC6.08□□□□□ -1.44
Clp1Q99LI9 Gm3867-201ENSMUST00000086108 279 ntBASIC6.08□□□□□ -1.44
Clp1Q99LI9 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Clp1Q99LI9 Gm37589-201ENSMUST00000193609 3994 ntBASIC6.08□□□□□ -1.44
Clp1Q99LI9 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Clp1Q99LI9 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC6.08□□□□□ -1.44
Clp1Q99LI9 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC6.08□□□□□ -1.44
Clp1Q99LI9 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
Clp1Q99LI9 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC6.08□□□□□ -1.44
Clp1Q99LI9 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Clp1Q99LI9 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Clp1Q99LI9 Gm42541-201ENSMUST00000199871 2249 ntBASIC6.07□□□□□ -1.44
Clp1Q99LI9 Gm44043-201ENSMUST00000203426 3253 ntBASIC6.07□□□□□ -1.44
Clp1Q99LI9 Gm29293-201ENSMUST00000189416 2188 ntBASIC6.07□□□□□ -1.44
Clp1Q99LI9 Gm18163-201ENSMUST00000197877 1643 ntBASIC6.07□□□□□ -1.44
Clp1Q99LI9 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Clp1Q99LI9 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC6.07□□□□□ -1.44
Clp1Q99LI9 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Clp1Q99LI9 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms