Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm37970-201ENSMUST00000193865 1732 ntBASIC6.38□□□□□ -1.39
Pcdhb3Q91XZ7 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdhb3Q91XZ7 Gm7048-201ENSMUST00000199395 1891 ntBASIC6.38□□□□□ -1.39
Pcdhb3Q91XZ7 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Pcdhb3Q91XZ7 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Pcdhb3Q91XZ7 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdhb3Q91XZ7 Gm44440-201ENSMUST00000203139 2373 ntBASIC6.38□□□□□ -1.39
Pcdhb3Q91XZ7 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Pcdhb3Q91XZ7 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdhb3Q91XZ7 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdhb3Q91XZ7 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC6.38□□□□□ -1.39
Pcdhb3Q91XZ7 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Pcdhb3Q91XZ7 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 Gm10933-201ENSMUST00000221891 1861 ntBASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 Gm44735-201ENSMUST00000206197 1752 ntBASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 Gm11743-201ENSMUST00000117385 1735 ntBASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 Gm14895-201ENSMUST00000121858 1361 ntBASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 Gm14541-201ENSMUST00000118985 157 ntBASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 Gm24860-201ENSMUST00000158457 276 ntBASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 Gm9672-201ENSMUST00000166437 425 ntBASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 Gm3585-201ENSMUST00000173438 875 ntBASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 Gm25361-201ENSMUST00000179358 76 ntBASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 Gm43849-201ENSMUST00000201086 215 ntBASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 Gm17822-201ENSMUST00000204307 351 ntBASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 Gm19177-201ENSMUST00000204520 613 ntBASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 AC153847.1-201ENSMUST00000214524 353 ntBASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 AC154834.1-201ENSMUST00000224697 358 ntBASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 AC163664.2-201ENSMUST00000228894 459 ntBASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 AC165260.6-206ENSMUST00000223884 3698 ntBASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 Gm37802-201ENSMUST00000194998 2643 ntBASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 Gm37531-201ENSMUST00000191628 5415 ntBASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 Gm37217-201ENSMUST00000194017 3521 ntBASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Pcdhb3Q91XZ7 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Pcdhb3Q91XZ7 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Pcdhb3Q91XZ7 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Pcdhb3Q91XZ7 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Pcdhb3Q91XZ7 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Pcdhb3Q91XZ7 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC6.36□□□□□ -1.39
Pcdhb3Q91XZ7 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
Pcdhb3Q91XZ7 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Pcdhb3Q91XZ7 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC6.36□□□□□ -1.39
Pcdhb3Q91XZ7 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Pcdhb3Q91XZ7 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Pcdhb3Q91XZ7 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Pcdhb3Q91XZ7 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC6.36□□□□□ -1.39
Pcdhb3Q91XZ7 Gm26079-201ENSMUST00000104066 133 ntBASIC6.36□□□□□ -1.39
Pcdhb3Q91XZ7 Rnu11-201ENSMUST00000104135 134 ntBASIC6.36□□□□□ -1.39
Pcdhb3Q91XZ7 Gm25877-201ENSMUST00000104326 129 ntBASIC6.36□□□□□ -1.39
Pcdhb3Q91XZ7 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC6.36□□□□□ -1.39
Pcdhb3Q91XZ7 Gm6305-201ENSMUST00000121027 1012 ntBASIC6.36□□□□□ -1.39
Pcdhb3Q91XZ7 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC6.36□□□□□ -1.39
Pcdhb3Q91XZ7 Gm24713-201ENSMUST00000178850 107 ntBASIC6.36□□□□□ -1.39
Pcdhb3Q91XZ7 Gm25448-201ENSMUST00000180065 107 ntBASIC6.36□□□□□ -1.39
Pcdhb3Q91XZ7 Gm21614-201ENSMUST00000183260 1005 ntBASIC6.36□□□□□ -1.39
Pcdhb3Q91XZ7 Gm29451-201ENSMUST00000188862 696 ntBASIC6.36□□□□□ -1.39
Pcdhb3Q91XZ7 Gm28123-201ENSMUST00000189725 696 ntBASIC6.36□□□□□ -1.39
Pcdhb3Q91XZ7 Gm8860-201ENSMUST00000193160 445 ntBASIC6.36□□□□□ -1.39
Pcdhb3Q91XZ7 Gm37817-201ENSMUST00000195276 434 ntBASIC6.36□□□□□ -1.39
Pcdhb3Q91XZ7 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Pcdhb3Q91XZ7 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Pcdhb3Q91XZ7 Gm44059-201ENSMUST00000204048 351 ntBASIC6.36□□□□□ -1.39
Pcdhb3Q91XZ7 Gm17908-201ENSMUST00000205552 1256 ntBASIC6.36□□□□□ -1.39
Pcdhb3Q91XZ7 Gm44856-201ENSMUST00000206639 304 ntBASIC6.36□□□□□ -1.39
Pcdhb3Q91XZ7 Gm45405-201ENSMUST00000211544 609 ntBASIC6.36□□□□□ -1.39
Pcdhb3Q91XZ7 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC6.36□□□□□ -1.39
Pcdhb3Q91XZ7 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms