Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Ccdc9Q8VC31 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Ccdc9Q8VC31 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Ccdc9Q8VC31 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Ccdc9Q8VC31 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Ccdc9Q8VC31 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Ccdc9Q8VC31 Gm37124-201ENSMUST00000192140 1992 ntBASIC5.42□□□□□ -1.54
Ccdc9Q8VC31 Gm29293-201ENSMUST00000189416 2188 ntBASIC5.42□□□□□ -1.54
Ccdc9Q8VC31 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC5.42□□□□□ -1.54
Ccdc9Q8VC31 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Ccdc9Q8VC31 Gm23063-201ENSMUST00000102350 93 ntBASIC5.42□□□□□ -1.54
Ccdc9Q8VC31 Gm24230-201ENSMUST00000104313 129 ntBASIC5.42□□□□□ -1.54
Ccdc9Q8VC31 Gm7206-201ENSMUST00000117730 508 ntBASIC5.42□□□□□ -1.54
Ccdc9Q8VC31 Gm13314-201ENSMUST00000118742 335 ntBASIC5.42□□□□□ -1.54
Ccdc9Q8VC31 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC5.42□□□□□ -1.54
Ccdc9Q8VC31 Gm9003-201ENSMUST00000121810 482 ntBASIC5.42□□□□□ -1.54
Ccdc9Q8VC31 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Ccdc9Q8VC31 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC5.42□□□□□ -1.54
Ccdc9Q8VC31 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC5.42□□□□□ -1.54
Ccdc9Q8VC31 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC5.42□□□□□ -1.54
Ccdc9Q8VC31 Gm26171-201ENSMUST00000158422 131 ntBASIC5.42□□□□□ -1.54
Ccdc9Q8VC31 Scarna6-201ENSMUST00000158656 265 ntBASIC5.42□□□□□ -1.54
Ccdc9Q8VC31 Gm8224-201ENSMUST00000166178 497 ntBASIC5.42□□□□□ -1.54
Ccdc9Q8VC31 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC5.42□□□□□ -1.54
Ccdc9Q8VC31 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
Ccdc9Q8VC31 Gm27044-201ENSMUST00000183033 796 ntBASIC5.42□□□□□ -1.54
Ccdc9Q8VC31 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Ccdc9Q8VC31 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC5.42□□□□□ -1.54
Ccdc9Q8VC31 Gm8498-201ENSMUST00000188227 974 ntBASIC5.42□□□□□ -1.54
Ccdc9Q8VC31 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC5.42□□□□□ -1.54
Ccdc9Q8VC31 Gm9134-201ENSMUST00000193186 551 ntBASIC5.42□□□□□ -1.54
Ccdc9Q8VC31 Gm42164-201ENSMUST00000198881 379 ntBASIC5.42□□□□□ -1.54
Ccdc9Q8VC31 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC5.42□□□□□ -1.54
Ccdc9Q8VC31 Trav12-4-201ENSMUST00000200663 271 ntBASIC5.42□□□□□ -1.54
Ccdc9Q8VC31 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Ccdc9Q8VC31 Gm19987-201ENSMUST00000216339 499 ntBASIC5.42□□□□□ -1.54
Ccdc9Q8VC31 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC5.42□□□□□ -1.54
Ccdc9Q8VC31 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC5.42□□□□□ -1.54
Ccdc9Q8VC31 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC5.42□□□□□ -1.54
Ccdc9Q8VC31 AC154583.1-201ENSMUST00000224788 655 ntBASIC5.42□□□□□ -1.54
Ccdc9Q8VC31 CT009550.5-201ENSMUST00000226286 382 ntBASIC5.42□□□□□ -1.54
Ccdc9Q8VC31 Ear-ps9-202ENSMUST00000226796 245 ntBASIC5.42□□□□□ -1.54
Ccdc9Q8VC31 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Ccdc9Q8VC31 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Ccdc9Q8VC31 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Ccdc9Q8VC31 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Ccdc9Q8VC31 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Ccdc9Q8VC31 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Ccdc9Q8VC31 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Ccdc9Q8VC31 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Ccdc9Q8VC31 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Ccdc9Q8VC31 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Ccdc9Q8VC31 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Ccdc9Q8VC31 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Ccdc9Q8VC31 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Ccdc9Q8VC31 Gm7648-201ENSMUST00000173036 1658 ntBASIC5.41□□□□□ -1.54
Ccdc9Q8VC31 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
Ccdc9Q8VC31 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Ccdc9Q8VC31 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC5.41□□□□□ -1.54
Ccdc9Q8VC31 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Ccdc9Q8VC31 Gm22273-201ENSMUST00000104040 132 ntBASIC5.41□□□□□ -1.54
Ccdc9Q8VC31 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC5.41□□□□□ -1.54
Ccdc9Q8VC31 Gm14890-201ENSMUST00000117660 676 ntBASIC5.41□□□□□ -1.54
Ccdc9Q8VC31 Gm12401-201ENSMUST00000118435 228 ntBASIC5.41□□□□□ -1.54
Ccdc9Q8VC31 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC5.41□□□□□ -1.54
Ccdc9Q8VC31 Gm14463-201ENSMUST00000121117 498 ntBASIC5.41□□□□□ -1.54
Ccdc9Q8VC31 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Ccdc9Q8VC31 Gm12650-201ENSMUST00000121966 258 ntBASIC5.41□□□□□ -1.54
Ccdc9Q8VC31 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Ccdc9Q8VC31 Gm26424-201ENSMUST00000122530 104 ntBASIC5.41□□□□□ -1.54
Ccdc9Q8VC31 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC5.41□□□□□ -1.54
Ccdc9Q8VC31 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Ccdc9Q8VC31 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
Ccdc9Q8VC31 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Ccdc9Q8VC31 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Ccdc9Q8VC31 Gm23499-201ENSMUST00000157736 268 ntBASIC5.41□□□□□ -1.54
Ccdc9Q8VC31 Gm16588-201ENSMUST00000162889 355 ntBASIC5.41□□□□□ -1.54
Ccdc9Q8VC31 Gm10074-201ENSMUST00000174543 249 ntBASIC5.41□□□□□ -1.54
Ccdc9Q8VC31 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC5.41□□□□□ -1.54
Ccdc9Q8VC31 Gm21045-201ENSMUST00000183058 1020 ntBASIC5.41□□□□□ -1.54
Ccdc9Q8VC31 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Ccdc9Q8VC31 Gm27355-201ENSMUST00000185045 128 ntBASIC5.41□□□□□ -1.54
Ccdc9Q8VC31 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC5.41□□□□□ -1.54
Ccdc9Q8VC31 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC5.41□□□□□ -1.54
Ccdc9Q8VC31 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC5.41□□□□□ -1.54
Ccdc9Q8VC31 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC5.41□□□□□ -1.54
Ccdc9Q8VC31 Ighv6-2-201ENSMUST00000192430 295 ntBASIC5.41□□□□□ -1.54
Ccdc9Q8VC31 Gm7496-201ENSMUST00000192573 1034 ntBASIC5.41□□□□□ -1.54
Ccdc9Q8VC31 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC5.41□□□□□ -1.54
Ccdc9Q8VC31 Gm18150-201ENSMUST00000195341 645 ntBASIC5.41□□□□□ -1.54
Ccdc9Q8VC31 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC5.41□□□□□ -1.54
Ccdc9Q8VC31 Gm43556-201ENSMUST00000196186 681 ntBASIC5.41□□□□□ -1.54
Ccdc9Q8VC31 Gm44343-201ENSMUST00000196702 90 ntBASIC5.41□□□□□ -1.54
Ccdc9Q8VC31 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Ccdc9Q8VC31 Gm18861-201ENSMUST00000202509 1186 ntBASIC5.41□□□□□ -1.54
Ccdc9Q8VC31 Gm44059-201ENSMUST00000204048 351 ntBASIC5.41□□□□□ -1.54
Ccdc9Q8VC31 Gm2522-201ENSMUST00000204280 322 ntBASIC5.41□□□□□ -1.54
Ccdc9Q8VC31 Gm19726-201ENSMUST00000205008 240 ntBASIC5.41□□□□□ -1.54
Ccdc9Q8VC31 Gm43922-201ENSMUST00000205071 328 ntBASIC5.41□□□□□ -1.54
Ccdc9Q8VC31 Gm44795-201ENSMUST00000205496 319 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms