Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC3.4□□□□□ -1.86
Col6a6Q8C6K9 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC3.4□□□□□ -1.86
Col6a6Q8C6K9 Gm17966-201ENSMUST00000193453 594 ntBASIC3.4□□□□□ -1.86
Col6a6Q8C6K9 Gm20239-201ENSMUST00000196610 982 ntBASIC3.4□□□□□ -1.86
Col6a6Q8C6K9 Gm45860-201ENSMUST00000212700 334 ntBASIC3.4□□□□□ -1.86
Col6a6Q8C6K9 AC118733.1-201ENSMUST00000217387 1217 ntBASIC3.4□□□□□ -1.86
Col6a6Q8C6K9 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.4□□□□□ -1.86
Col6a6Q8C6K9 AC160931.2-201ENSMUST00000221445 351 ntBASIC3.4□□□□□ -1.86
Col6a6Q8C6K9 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
Col6a6Q8C6K9 Gm44678-201ENSMUST00000207828 2775 ntBASIC3.4□□□□□ -1.86
Col6a6Q8C6K9 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.86
Col6a6Q8C6K9 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC3.4□□□□□ -1.86
Col6a6Q8C6K9 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Col6a6Q8C6K9 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC3.4□□□□□ -1.87
Col6a6Q8C6K9 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Col6a6Q8C6K9 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Col6a6Q8C6K9 Gm43831-201ENSMUST00000200461 2598 ntBASIC3.4□□□□□ -1.87
Col6a6Q8C6K9 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Col6a6Q8C6K9 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Col6a6Q8C6K9 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC3.4□□□□□ -1.87
Col6a6Q8C6K9 Gm24831-201ENSMUST00000116778 126 ntBASIC3.4□□□□□ -1.87
Col6a6Q8C6K9 Gm16005-201ENSMUST00000120515 269 ntBASIC3.4□□□□□ -1.87
Col6a6Q8C6K9 Gm26254-201ENSMUST00000122491 118 ntBASIC3.4□□□□□ -1.87
Col6a6Q8C6K9 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC3.4□□□□□ -1.87
Col6a6Q8C6K9 Gm8289-201ENSMUST00000144814 1182 ntBASIC3.4□□□□□ -1.87
Col6a6Q8C6K9 Gm23326-201ENSMUST00000157419 105 ntBASIC3.4□□□□□ -1.87
Col6a6Q8C6K9 Gm5066-201ENSMUST00000188479 822 ntBASIC3.4□□□□□ -1.87
Col6a6Q8C6K9 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
Col6a6Q8C6K9 Gm44582-201ENSMUST00000209125 445 ntBASIC3.4□□□□□ -1.87
Col6a6Q8C6K9 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC3.4□□□□□ -1.87
Col6a6Q8C6K9 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Col6a6Q8C6K9 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Col6a6Q8C6K9 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Col6a6Q8C6K9 Gm44530-201ENSMUST00000207920 3559 ntBASIC3.4□□□□□ -1.87
Col6a6Q8C6K9 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Col6a6Q8C6K9 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Col6a6Q8C6K9 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Col6a6Q8C6K9 Gm42614-201ENSMUST00000198724 1554 ntBASIC3.39□□□□□ -1.87
Col6a6Q8C6K9 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.39□□□□□ -1.87
Col6a6Q8C6K9 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC3.39□□□□□ -1.87
Col6a6Q8C6K9 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Col6a6Q8C6K9 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Col6a6Q8C6K9 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Col6a6Q8C6K9 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Col6a6Q8C6K9 Gm38065-201ENSMUST00000193147 3492 ntBASIC3.39□□□□□ -1.87
Col6a6Q8C6K9 Gm14516-201ENSMUST00000120012 252 ntBASIC3.39□□□□□ -1.87
Col6a6Q8C6K9 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Col6a6Q8C6K9 Gm12412-201ENSMUST00000121867 328 ntBASIC3.39□□□□□ -1.87
Col6a6Q8C6K9 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC3.39□□□□□ -1.87
Col6a6Q8C6K9 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Col6a6Q8C6K9 Gm9775-201ENSMUST00000189402 331 ntBASIC3.39□□□□□ -1.87
Col6a6Q8C6K9 Gm44371-201ENSMUST00000204148 467 ntBASIC3.39□□□□□ -1.87
Col6a6Q8C6K9 Gm8785-201ENSMUST00000220259 487 ntBASIC3.39□□□□□ -1.87
Col6a6Q8C6K9 AC135377.1-201ENSMUST00000223692 463 ntBASIC3.39□□□□□ -1.87
Col6a6Q8C6K9 AC159252.1-201ENSMUST00000224450 553 ntBASIC3.39□□□□□ -1.87
Col6a6Q8C6K9 AC166369.1-201ENSMUST00000228126 351 ntBASIC3.39□□□□□ -1.87
Col6a6Q8C6K9 Gm44676-201ENSMUST00000208520 3055 ntBASIC3.39□□□□□ -1.87
Col6a6Q8C6K9 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
Col6a6Q8C6K9 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Col6a6Q8C6K9 Gm42736-201ENSMUST00000200723 1353 ntBASIC3.39□□□□□ -1.87
Col6a6Q8C6K9 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Col6a6Q8C6K9 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Col6a6Q8C6K9 Gm13615-201ENSMUST00000120242 1612 ntBASIC3.39□□□□□ -1.87
Col6a6Q8C6K9 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Col6a6Q8C6K9 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Col6a6Q8C6K9 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC3.39□□□□□ -1.87
Col6a6Q8C6K9 n-TSaga9-201ENSMUST00000197675 107 ntBASIC3.39□□□□□ -1.87
Col6a6Q8C6K9 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC3.39□□□□□ -1.87
Col6a6Q8C6K9 Gm18225-201ENSMUST00000216708 742 ntBASIC3.39□□□□□ -1.87
Col6a6Q8C6K9 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Col6a6Q8C6K9 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
Col6a6Q8C6K9 Gm14886-201ENSMUST00000117208 2629 ntBASIC3.38□□□□□ -1.87
Col6a6Q8C6K9 AC124572.2-201ENSMUST00000218041 5152 ntBASIC3.38□□□□□ -1.87
Col6a6Q8C6K9 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Col6a6Q8C6K9 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
Col6a6Q8C6K9 Gm22936-201ENSMUST00000103955 126 ntBASIC3.38□□□□□ -1.87
Col6a6Q8C6K9 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
Col6a6Q8C6K9 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC3.38□□□□□ -1.87
Col6a6Q8C6K9 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC3.38□□□□□ -1.87
Col6a6Q8C6K9 Gm12543-201ENSMUST00000120410 543 ntBASIC3.38□□□□□ -1.87
Col6a6Q8C6K9 Gm24627-201ENSMUST00000122764 138 ntBASIC3.38□□□□□ -1.87
Col6a6Q8C6K9 Gm26045-201ENSMUST00000157862 97 ntBASIC3.38□□□□□ -1.87
Col6a6Q8C6K9 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC3.38□□□□□ -1.87
Col6a6Q8C6K9 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC3.38□□□□□ -1.87
Col6a6Q8C6K9 Gm8641-201ENSMUST00000186995 826 ntBASIC3.38□□□□□ -1.87
Col6a6Q8C6K9 Gm21803-201ENSMUST00000188897 693 ntBASIC3.38□□□□□ -1.87
Col6a6Q8C6K9 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
Col6a6Q8C6K9 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Col6a6Q8C6K9 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC3.38□□□□□ -1.87
Col6a6Q8C6K9 AC103672.3-201ENSMUST00000227649 3243 ntBASIC3.38□□□□□ -1.87
Col6a6Q8C6K9 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Col6a6Q8C6K9 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Col6a6Q8C6K9 Gm43829-201ENSMUST00000196191 3802 ntBASIC3.38□□□□□ -1.87
Col6a6Q8C6K9 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Col6a6Q8C6K9 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Col6a6Q8C6K9 Gm5155-201ENSMUST00000072381 2841 ntBASIC3.38□□□□□ -1.87
Col6a6Q8C6K9 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
Col6a6Q8C6K9 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
Col6a6Q8C6K9 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Col6a6Q8C6K9 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms