Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
Ccdc40Q8BI79 Gm42486-201ENSMUST00000200369 3486 ntBASIC4.51□□□□□ -1.69
Ccdc40Q8BI79 Gm37303-201ENSMUST00000194202 1559 ntBASIC4.51□□□□□ -1.69
Ccdc40Q8BI79 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Ccdc40Q8BI79 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC4.5□□□□□ -1.69
Ccdc40Q8BI79 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC4.5□□□□□ -1.69
Ccdc40Q8BI79 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Ccdc40Q8BI79 Gm10484-201ENSMUST00000196372 4759 ntBASIC4.5□□□□□ -1.69
Ccdc40Q8BI79 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Ccdc40Q8BI79 Gm44542-201ENSMUST00000208677 4314 ntBASIC4.5□□□□□ -1.69
Ccdc40Q8BI79 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Ccdc40Q8BI79 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC4.5□□□□□ -1.69
Ccdc40Q8BI79 Gm15058-201ENSMUST00000117689 458 ntBASIC4.5□□□□□ -1.69
Ccdc40Q8BI79 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC4.5□□□□□ -1.69
Ccdc40Q8BI79 Gm12392-201ENSMUST00000118014 938 ntBASIC4.5□□□□□ -1.69
Ccdc40Q8BI79 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC4.5□□□□□ -1.69
Ccdc40Q8BI79 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Ccdc40Q8BI79 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC4.5□□□□□ -1.69
Ccdc40Q8BI79 Gm21070-201ENSMUST00000182425 985 ntBASIC4.5□□□□□ -1.69
Ccdc40Q8BI79 Mir7056-201ENSMUST00000183776 59 ntBASIC4.5□□□□□ -1.69
Ccdc40Q8BI79 Gm27952-201ENSMUST00000184748 105 ntBASIC4.5□□□□□ -1.69
Ccdc40Q8BI79 Gm27733-201ENSMUST00000184803 68 ntBASIC4.5□□□□□ -1.69
Ccdc40Q8BI79 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Ccdc40Q8BI79 Gm37857-201ENSMUST00000191784 1199 ntBASIC4.5□□□□□ -1.69
Ccdc40Q8BI79 Gm37050-201ENSMUST00000193464 466 ntBASIC4.5□□□□□ -1.69
Ccdc40Q8BI79 Gm9722-201ENSMUST00000194568 802 ntBASIC4.5□□□□□ -1.69
Ccdc40Q8BI79 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC4.5□□□□□ -1.69
Ccdc40Q8BI79 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC4.5□□□□□ -1.69
Ccdc40Q8BI79 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC4.5□□□□□ -1.69
Ccdc40Q8BI79 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC4.5□□□□□ -1.69
Ccdc40Q8BI79 Gm9616-201ENSMUST00000221154 781 ntBASIC4.5□□□□□ -1.69
Ccdc40Q8BI79 AC167420.1-201ENSMUST00000222999 2121 ntBASIC4.5□□□□□ -1.69
Ccdc40Q8BI79 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC4.5□□□□□ -1.69
Ccdc40Q8BI79 AC102542.1-201ENSMUST00000225204 1138 ntBASIC4.5□□□□□ -1.69
Ccdc40Q8BI79 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Ccdc40Q8BI79 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Ccdc40Q8BI79 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Ccdc40Q8BI79 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Ccdc40Q8BI79 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Ccdc40Q8BI79 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC4.5□□□□□ -1.69
Ccdc40Q8BI79 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Ccdc40Q8BI79 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
Ccdc40Q8BI79 Gm7452-202ENSMUST00000202891 3039 ntBASIC4.5□□□□□ -1.69
Ccdc40Q8BI79 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Ccdc40Q8BI79 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Ccdc40Q8BI79 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
Ccdc40Q8BI79 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Ccdc40Q8BI79 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Ccdc40Q8BI79 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Ccdc40Q8BI79 Gm22473-201ENSMUST00000104114 132 ntBASIC4.49□□□□□ -1.69
Ccdc40Q8BI79 Gm7421-201ENSMUST00000119298 639 ntBASIC4.49□□□□□ -1.69
Ccdc40Q8BI79 Gm7365-201ENSMUST00000120877 639 ntBASIC4.49□□□□□ -1.69
Ccdc40Q8BI79 Gm14589-201ENSMUST00000121640 727 ntBASIC4.49□□□□□ -1.69
Ccdc40Q8BI79 Gm25898-201ENSMUST00000158303 106 ntBASIC4.49□□□□□ -1.69
Ccdc40Q8BI79 Mir5098-201ENSMUST00000175320 82 ntBASIC4.49□□□□□ -1.69
Ccdc40Q8BI79 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC4.49□□□□□ -1.69
Ccdc40Q8BI79 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Ccdc40Q8BI79 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Ccdc40Q8BI79 Gm19200-201ENSMUST00000182579 1001 ntBASIC4.49□□□□□ -1.69
Ccdc40Q8BI79 Gm5252-201ENSMUST00000189030 909 ntBASIC4.49□□□□□ -1.69
Ccdc40Q8BI79 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC4.49□□□□□ -1.69
Ccdc40Q8BI79 Gm21735-201ENSMUST00000190360 696 ntBASIC4.49□□□□□ -1.69
Ccdc40Q8BI79 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC4.49□□□□□ -1.69
Ccdc40Q8BI79 Trbv28-201ENSMUST00000192804 264 ntBASIC4.49□□□□□ -1.69
Ccdc40Q8BI79 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC4.49□□□□□ -1.69
Ccdc40Q8BI79 Gm45032-201ENSMUST00000205375 520 ntBASIC4.49□□□□□ -1.69
Ccdc40Q8BI79 Gm44665-201ENSMUST00000205381 251 ntBASIC4.49□□□□□ -1.69
Ccdc40Q8BI79 Gm17737-201ENSMUST00000210183 1147 ntBASIC4.49□□□□□ -1.69
Ccdc40Q8BI79 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Ccdc40Q8BI79 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Ccdc40Q8BI79 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC4.49□□□□□ -1.69
Ccdc40Q8BI79 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC4.49□□□□□ -1.69
Ccdc40Q8BI79 AC117240.2-201ENSMUST00000220921 263 ntBASIC4.49□□□□□ -1.69
Ccdc40Q8BI79 AC160931.2-201ENSMUST00000221445 351 ntBASIC4.49□□□□□ -1.69
Ccdc40Q8BI79 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC4.49□□□□□ -1.69
Ccdc40Q8BI79 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC4.49□□□□□ -1.69
Ccdc40Q8BI79 AC134468.2-201ENSMUST00000222549 672 ntBASIC4.49□□□□□ -1.69
Ccdc40Q8BI79 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Ccdc40Q8BI79 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Ccdc40Q8BI79 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Ccdc40Q8BI79 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Ccdc40Q8BI79 AC121997.2-203ENSMUST00000228613 4192 ntBASIC4.49□□□□□ -1.69
Ccdc40Q8BI79 Gm37527-201ENSMUST00000192406 3547 ntBASIC4.49□□□□□ -1.69
Ccdc40Q8BI79 Gm42681-201ENSMUST00000197999 1611 ntBASIC4.49□□□□□ -1.69
Ccdc40Q8BI79 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Ccdc40Q8BI79 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Ccdc40Q8BI79 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Ccdc40Q8BI79 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Ccdc40Q8BI79 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Ccdc40Q8BI79 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
Ccdc40Q8BI79 Gm16421-201ENSMUST00000117616 1557 ntBASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 Gm38065-201ENSMUST00000193147 3492 ntBASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 Gm23014-201ENSMUST00000104144 130 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms