Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
Trim28Q62318 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Trim28Q62318 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
Trim28Q62318 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC5.93□□□□□ -1.46
Trim28Q62318 Gm37514-201ENSMUST00000194512 2753 ntBASIC5.92□□□□□ -1.46
Trim28Q62318 Gm20667-201ENSMUST00000175674 1930 ntBASIC5.92□□□□□ -1.46
Trim28Q62318 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Trim28Q62318 Gm26367-201ENSMUST00000104165 132 ntBASIC5.92□□□□□ -1.46
Trim28Q62318 Gm13454-201ENSMUST00000118166 483 ntBASIC5.92□□□□□ -1.46
Trim28Q62318 Gm12770-201ENSMUST00000121734 462 ntBASIC5.92□□□□□ -1.46
Trim28Q62318 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Trim28Q62318 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC5.92□□□□□ -1.46
Trim28Q62318 Gm23587-201ENSMUST00000157658 84 ntBASIC5.92□□□□□ -1.46
Trim28Q62318 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC5.92□□□□□ -1.46
Trim28Q62318 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
Trim28Q62318 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC5.92□□□□□ -1.46
Trim28Q62318 Mir7222-201ENSMUST00000183740 75 ntBASIC5.92□□□□□ -1.46
Trim28Q62318 Mir6899-201ENSMUST00000184798 64 ntBASIC5.92□□□□□ -1.46
Trim28Q62318 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC5.92□□□□□ -1.46
Trim28Q62318 Gm43035-201ENSMUST00000197626 517 ntBASIC5.92□□□□□ -1.46
Trim28Q62318 Gm43710-201ENSMUST00000199583 452 ntBASIC5.92□□□□□ -1.46
Trim28Q62318 Gm43954-201ENSMUST00000204634 544 ntBASIC5.92□□□□□ -1.46
Trim28Q62318 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Trim28Q62318 Gm44135-201ENSMUST00000205221 368 ntBASIC5.92□□□□□ -1.46
Trim28Q62318 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC5.92□□□□□ -1.46
Trim28Q62318 Gm18877-201ENSMUST00000207706 539 ntBASIC5.92□□□□□ -1.46
Trim28Q62318 Gm45910-201ENSMUST00000212493 1003 ntBASIC5.92□□□□□ -1.46
Trim28Q62318 AC112274.2-201ENSMUST00000218436 170 ntBASIC5.92□□□□□ -1.46
Trim28Q62318 Gm46190-201ENSMUST00000219650 427 ntBASIC5.92□□□□□ -1.46
Trim28Q62318 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Trim28Q62318 CT571256.1-201ENSMUST00000226045 585 ntBASIC5.92□□□□□ -1.46
Trim28Q62318 AC137902.2-201ENSMUST00000227989 576 ntBASIC5.92□□□□□ -1.46
Trim28Q62318 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Trim28Q62318 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Trim28Q62318 n-R5s167-201ENSMUST00000083227 121 ntBASIC5.92□□□□□ -1.46
Trim28Q62318 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC5.92□□□□□ -1.46
Trim28Q62318 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Trim28Q62318 Olfr1221-201ENSMUST00000099795 936 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Trim28Q62318 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
Trim28Q62318 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC5.92□□□□□ -1.46
Trim28Q62318 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
Trim28Q62318 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Trim28Q62318 Gm26996-201ENSMUST00000204418 1359 ntBASIC5.92□□□□□ -1.46
Trim28Q62318 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Trim28Q62318 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Trim28Q62318 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Trim28Q62318 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Trim28Q62318 Gm37397-201ENSMUST00000194579 2842 ntBASIC5.91□□□□□ -1.46
Trim28Q62318 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Trim28Q62318 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Trim28Q62318 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Trim28Q62318 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC5.91□□□□□ -1.46
Trim28Q62318 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC5.91□□□□□ -1.46
Trim28Q62318 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC5.91□□□□□ -1.46
Trim28Q62318 Gm15916-201ENSMUST00000118355 736 ntBASIC5.91□□□□□ -1.46
Trim28Q62318 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Trim28Q62318 Gm13000-201ENSMUST00000120937 496 ntBASIC5.91□□□□□ -1.46
Trim28Q62318 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC5.91□□□□□ -1.46
Trim28Q62318 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Trim28Q62318 Gm22186-201ENSMUST00000157822 122 ntBASIC5.91□□□□□ -1.46
Trim28Q62318 Gm25264-201ENSMUST00000158519 117 ntBASIC5.91□□□□□ -1.46
Trim28Q62318 Gm27896-201ENSMUST00000175162 317 ntBASIC5.91□□□□□ -1.46
Trim28Q62318 Gm6214-201ENSMUST00000178845 541 ntBASIC5.91□□□□□ -1.46
Trim28Q62318 Gm29228-201ENSMUST00000185489 418 ntBASIC5.91□□□□□ -1.46
Trim28Q62318 Gm29413-201ENSMUST00000186019 880 ntBASIC5.91□□□□□ -1.46
Trim28Q62318 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Trim28Q62318 Gm37979-201ENSMUST00000193065 712 ntBASIC5.91□□□□□ -1.46
Trim28Q62318 Gm36638-201ENSMUST00000193295 400 ntBASIC5.91□□□□□ -1.46
Trim28Q62318 Gm37601-201ENSMUST00000194922 394 ntBASIC5.91□□□□□ -1.46
Trim28Q62318 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC5.91□□□□□ -1.46
Trim28Q62318 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC5.91□□□□□ -1.46
Trim28Q62318 Gm18452-201ENSMUST00000202968 1111 ntBASIC5.91□□□□□ -1.46
Trim28Q62318 Gm17779-201ENSMUST00000213395 394 ntBASIC5.91□□□□□ -1.46
Trim28Q62318 AC122188.1-201ENSMUST00000217534 312 ntBASIC5.91□□□□□ -1.46
Trim28Q62318 AC153526.4-201ENSMUST00000217713 379 ntBASIC5.91□□□□□ -1.46
Trim28Q62318 AC133283.1-201ENSMUST00000228443 859 ntBASIC5.91□□□□□ -1.46
Trim28Q62318 AC164437.2-201ENSMUST00000228915 797 ntBASIC5.91□□□□□ -1.46
Trim28Q62318 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC5.91□□□□□ -1.46
Trim28Q62318 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Trim28Q62318 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC5.91□□□□□ -1.46
Trim28Q62318 Gm23928-201ENSMUST00000082469 145 ntBASIC5.91□□□□□ -1.46
Trim28Q62318 n-R5s162-201ENSMUST00000082581 119 ntBASIC5.91□□□□□ -1.46
Trim28Q62318 Snord22-201ENSMUST00000083153 126 ntBASIC5.91□□□□□ -1.46
Trim28Q62318 n-R5s7-201ENSMUST00000083755 121 ntBASIC5.91□□□□□ -1.46
Trim28Q62318 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Trim28Q62318 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Trim28Q62318 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Trim28Q62318 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Trim28Q62318 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Trim28Q62318 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Trim28Q62318 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
Trim28Q62318 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
Trim28Q62318 Gm6162-201ENSMUST00000194870 2930 ntBASIC5.9□□□□□ -1.46
Trim28Q62318 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Trim28Q62318 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
Trim28Q62318 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Trim28Q62318 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Trim28Q62318 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Trim28Q62318 Gm14979-201ENSMUST00000121561 1035 ntBASIC5.9□□□□□ -1.46
Trim28Q62318 Gm14916-201ENSMUST00000121904 204 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 105.2 ms