Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Gm24608-201ENSMUST00000104381 136 ntBASIC4.02□□□□□ -1.77
Six4Q61321 Gm14282-201ENSMUST00000119484 240 ntBASIC4.02□□□□□ -1.77
Six4Q61321 Gm13532-201ENSMUST00000120373 240 ntBASIC4.02□□□□□ -1.77
Six4Q61321 Gm9003-201ENSMUST00000121810 482 ntBASIC4.02□□□□□ -1.77
Six4Q61321 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Six4Q61321 Gm24503-201ENSMUST00000158454 135 ntBASIC4.02□□□□□ -1.77
Six4Q61321 Gm2389-201ENSMUST00000160487 189 ntBASIC4.02□□□□□ -1.77
Six4Q61321 Gm18522-201ENSMUST00000173947 650 ntBASIC4.02□□□□□ -1.77
Six4Q61321 Mir1251-201ENSMUST00000175486 84 ntBASIC4.02□□□□□ -1.77
Six4Q61321 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Six4Q61321 Gm4248-201ENSMUST00000196905 316 ntBASIC4.02□□□□□ -1.77
Six4Q61321 Gm44371-201ENSMUST00000204148 467 ntBASIC4.02□□□□□ -1.77
Six4Q61321 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC4.02□□□□□ -1.77
Six4Q61321 Gm3690-201ENSMUST00000211341 262 ntBASIC4.02□□□□□ -1.77
Six4Q61321 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Six4Q61321 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Six4Q61321 AC158523.1-201ENSMUST00000221398 328 ntBASIC4.02□□□□□ -1.77
Six4Q61321 AC156559.1-201ENSMUST00000224158 222 ntBASIC4.02□□□□□ -1.77
Six4Q61321 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Six4Q61321 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
Six4Q61321 Gm37478-201ENSMUST00000193624 3495 ntBASIC4.02□□□□□ -1.77
Six4Q61321 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Six4Q61321 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC4.02□□□□□ -1.77
Six4Q61321 AC140397.1-201ENSMUST00000225563 4562 ntBASIC4.02□□□□□ -1.77
Six4Q61321 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
Six4Q61321 Gm13310-201ENSMUST00000120962 1381 ntBASIC4.02□□□□□ -1.77
Six4Q61321 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Six4Q61321 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Six4Q61321 Gm37742-201ENSMUST00000193263 3979 ntBASIC4.01□□□□□ -1.77
Six4Q61321 Gm38260-201ENSMUST00000193573 3995 ntBASIC4.01□□□□□ -1.77
Six4Q61321 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Six4Q61321 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Six4Q61321 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.01□□□□□ -1.77
Six4Q61321 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
Six4Q61321 Gm26273-201ENSMUST00000104180 131 ntBASIC4.01□□□□□ -1.77
Six4Q61321 Gm13664-201ENSMUST00000117304 345 ntBASIC4.01□□□□□ -1.77
Six4Q61321 Gm14586-201ENSMUST00000119571 408 ntBASIC4.01□□□□□ -1.77
Six4Q61321 Gm5942-201ENSMUST00000120046 439 ntBASIC4.01□□□□□ -1.77
Six4Q61321 Gm14605-201ENSMUST00000120599 268 ntBASIC4.01□□□□□ -1.77
Six4Q61321 Gm11403-201ENSMUST00000122195 369 ntBASIC4.01□□□□□ -1.77
Six4Q61321 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.01□□□□□ -1.77
Six4Q61321 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Six4Q61321 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Six4Q61321 Gm24014-201ENSMUST00000157728 157 ntBASIC4.01□□□□□ -1.77
Six4Q61321 Gm23897-201ENSMUST00000158110 158 ntBASIC4.01□□□□□ -1.77
Six4Q61321 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC4.01□□□□□ -1.77
Six4Q61321 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Six4Q61321 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC4.01□□□□□ -1.77
Six4Q61321 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC4.01□□□□□ -1.77
Six4Q61321 Gm21045-201ENSMUST00000183058 1020 ntBASIC4.01□□□□□ -1.77
Six4Q61321 Mir6345-201ENSMUST00000184286 128 ntBASIC4.01□□□□□ -1.77
Six4Q61321 Gm28471-201ENSMUST00000185994 615 ntBASIC4.01□□□□□ -1.77
Six4Q61321 Gm28625-201ENSMUST00000188309 205 ntBASIC4.01□□□□□ -1.77
Six4Q61321 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC4.01□□□□□ -1.77
Six4Q61321 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC4.01□□□□□ -1.77
Six4Q61321 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC4.01□□□□□ -1.77
Six4Q61321 Gm6303-201ENSMUST00000210123 471 ntBASIC4.01□□□□□ -1.77
Six4Q61321 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC4.01□□□□□ -1.77
Six4Q61321 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Six4Q61321 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Six4Q61321 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC4.01□□□□□ -1.77
Six4Q61321 AC173482.1-201ENSMUST00000224494 3815 ntBASIC4.01□□□□□ -1.77
Six4Q61321 AC137961.1-201ENSMUST00000227924 734 ntBASIC4.01□□□□□ -1.77
Six4Q61321 Mir34b-201ENSMUST00000083558 84 ntBASIC4.01□□□□□ -1.77
Six4Q61321 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Six4Q61321 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Six4Q61321 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Six4Q61321 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Six4Q61321 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC4□□□□□ -1.77
Six4Q61321 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Six4Q61321 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC4□□□□□ -1.77
Six4Q61321 Gm12667-201ENSMUST00000118299 1332 ntBASIC4□□□□□ -1.77
Six4Q61321 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC4□□□□□ -1.77
Six4Q61321 AC154462.1-201ENSMUST00000228897 2260 ntBASIC4□□□□□ -1.77
Six4Q61321 Gm15994-201ENSMUST00000118029 402 ntBASIC4□□□□□ -1.77
Six4Q61321 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC4□□□□□ -1.77
Six4Q61321 Gm12564-201ENSMUST00000119860 321 ntBASIC4□□□□□ -1.77
Six4Q61321 Gm13677-201ENSMUST00000120739 595 ntBASIC4□□□□□ -1.77
Six4Q61321 Gm22986-201ENSMUST00000122753 130 ntBASIC4□□□□□ -1.77
Six4Q61321 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC4□□□□□ -1.77
Six4Q61321 Hba-ps4-201ENSMUST00000128900 447 ntBASIC4□□□□□ -1.77
Six4Q61321 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC4□□□□□ -1.77
Six4Q61321 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC4□□□□□ -1.77
Six4Q61321 Gm23228-201ENSMUST00000157296 270 ntBASIC4□□□□□ -1.77
Six4Q61321 Gm26148-201ENSMUST00000157430 68 ntBASIC4□□□□□ -1.77
Six4Q61321 Gm7241-201ENSMUST00000159853 357 ntBASIC4□□□□□ -1.77
Six4Q61321 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Six4Q61321 Gm8498-201ENSMUST00000188227 974 ntBASIC4□□□□□ -1.77
Six4Q61321 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC4□□□□□ -1.77
Six4Q61321 Gm28267-201ENSMUST00000191093 265 ntBASIC4□□□□□ -1.77
Six4Q61321 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC4□□□□□ -1.77
Six4Q61321 Gm38279-201ENSMUST00000194067 1131 ntBASIC4□□□□□ -1.77
Six4Q61321 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC4□□□□□ -1.77
Six4Q61321 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC4□□□□□ -1.77
Six4Q61321 Gm43044-201ENSMUST00000198091 379 ntBASIC4□□□□□ -1.77
Six4Q61321 Gm44099-201ENSMUST00000203299 112 ntBASIC4□□□□□ -1.77
Six4Q61321 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC4□□□□□ -1.77
Six4Q61321 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC4□□□□□ -1.77
Six4Q61321 Gm18016-201ENSMUST00000216119 801 ntBASIC4□□□□□ -1.77
Six4Q61321 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC4□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 132.6 ms