Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 AC142245.1-201ENSMUST00000226611 1505 ntBASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 Gm43320-201ENSMUST00000196047 2916 ntBASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 Gm16082-201ENSMUST00000115992 377 ntBASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 Gm14816-201ENSMUST00000117174 294 ntBASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 Gm15933-201ENSMUST00000117215 616 ntBASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 Gm15313-201ENSMUST00000119179 282 ntBASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 Gm13852-201ENSMUST00000122350 242 ntBASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 Gm25271-201ENSMUST00000157273 290 ntBASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 Gm22211-201ENSMUST00000158097 156 ntBASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 Gm6245-201ENSMUST00000164699 768 ntBASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 Gm27695-201ENSMUST00000184301 91 ntBASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 Mir6986-201ENSMUST00000184483 58 ntBASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 Gm28471-201ENSMUST00000185994 615 ntBASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 Gm28598-201ENSMUST00000186490 615 ntBASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 Gm17916-202ENSMUST00000187634 1187 ntBASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 Gm29268-201ENSMUST00000188669 615 ntBASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 Gm29334-201ENSMUST00000190334 357 ntBASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 Gm29218-205ENSMUST00000190846 615 ntBASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 Gm28978-201ENSMUST00000191120 615 ntBASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 Gm36964-201ENSMUST00000191876 198 ntBASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 Gm37172-201ENSMUST00000191926 615 ntBASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 Gm44354-201ENSMUST00000196017 143 ntBASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 Gm43853-201ENSMUST00000197162 301 ntBASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 Gm45032-201ENSMUST00000205375 520 ntBASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 Gm18944-201ENSMUST00000207672 643 ntBASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 Gm31931-201ENSMUST00000219666 222 ntBASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 Gm19073-201ENSMUST00000219978 555 ntBASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 AC155237.2-201ENSMUST00000228487 478 ntBASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 AC126690.1-201ENSMUST00000228898 397 ntBASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 Snord14e-201ENSMUST00000082857 90 ntBASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 AC154462.1-201ENSMUST00000228897 2260 ntBASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 Gm44742-201ENSMUST00000207190 1412 ntBASIC3.36□□□□□ -1.87
Trav5d-4Q5R1F6 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Trav5d-4Q5R1F6 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Trav5d-4Q5R1F6 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC3.35□□□□□ -1.87
Trav5d-4Q5R1F6 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.35□□□□□ -1.87
Trav5d-4Q5R1F6 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Trav5d-4Q5R1F6 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC3.35□□□□□ -1.87
Trav5d-4Q5R1F6 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Trav5d-4Q5R1F6 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Trav5d-4Q5R1F6 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Trav5d-4Q5R1F6 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Trav5d-4Q5R1F6 Gm4736-201ENSMUST00000100870 380 ntBASIC3.35□□□□□ -1.87
Trav5d-4Q5R1F6 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Trav5d-4Q5R1F6 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC3.35□□□□□ -1.87
Trav5d-4Q5R1F6 Mir193b-201ENSMUST00000103784 79 ntBASIC3.35□□□□□ -1.87
Trav5d-4Q5R1F6 Gm26273-201ENSMUST00000104180 131 ntBASIC3.35□□□□□ -1.87
Trav5d-4Q5R1F6 Gm24855-201ENSMUST00000104848 97 ntBASIC3.35□□□□□ -1.87
Trav5d-4Q5R1F6 Gm11408-201ENSMUST00000117889 519 ntBASIC3.35□□□□□ -1.87
Trav5d-4Q5R1F6 Gm11566-201ENSMUST00000118550 203 ntBASIC3.35□□□□□ -1.87
Trav5d-4Q5R1F6 Gm13532-201ENSMUST00000120373 240 ntBASIC3.35□□□□□ -1.87
Trav5d-4Q5R1F6 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Trav5d-4Q5R1F6 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Trav5d-4Q5R1F6 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Trav5d-4Q5R1F6 Gm23753-201ENSMUST00000157575 149 ntBASIC3.35□□□□□ -1.87
Trav5d-4Q5R1F6 Gm26028-201ENSMUST00000158660 294 ntBASIC3.35□□□□□ -1.87
Trav5d-4Q5R1F6 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC3.35□□□□□ -1.87
Trav5d-4Q5R1F6 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Trav5d-4Q5R1F6 Gm7497-201ENSMUST00000183064 1003 ntBASIC3.35□□□□□ -1.87
Trav5d-4Q5R1F6 Gm28596-201ENSMUST00000185870 696 ntBASIC3.35□□□□□ -1.87
Trav5d-4Q5R1F6 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC3.35□□□□□ -1.87
Trav5d-4Q5R1F6 Gm29598-201ENSMUST00000188996 588 ntBASIC3.35□□□□□ -1.87
Trav5d-4Q5R1F6 Gm19214-201ENSMUST00000191956 1083 ntBASIC3.35□□□□□ -1.87
Trav5d-4Q5R1F6 Gm38061-201ENSMUST00000192490 365 ntBASIC3.35□□□□□ -1.87
Trav5d-4Q5R1F6 Gm32295-201ENSMUST00000192558 696 ntBASIC3.35□□□□□ -1.87
Trav5d-4Q5R1F6 Gm31260-201ENSMUST00000193478 696 ntBASIC3.35□□□□□ -1.87
Trav5d-4Q5R1F6 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC3.35□□□□□ -1.87
Trav5d-4Q5R1F6 Gm4248-201ENSMUST00000196905 316 ntBASIC3.35□□□□□ -1.87
Trav5d-4Q5R1F6 Gm43424-201ENSMUST00000200484 253 ntBASIC3.35□□□□□ -1.87
Trav5d-4Q5R1F6 Gm8820-201ENSMUST00000204077 571 ntBASIC3.35□□□□□ -1.87
Trav5d-4Q5R1F6 Gm44972-201ENSMUST00000206419 406 ntBASIC3.35□□□□□ -1.87
Trav5d-4Q5R1F6 Gm8745-201ENSMUST00000207846 782 ntBASIC3.35□□□□□ -1.87
Trav5d-4Q5R1F6 AC166343.1-201ENSMUST00000213261 577 ntBASIC3.35□□□□□ -1.87
Trav5d-4Q5R1F6 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC3.35□□□□□ -1.87
Trav5d-4Q5R1F6 AC154738.1-201ENSMUST00000227054 368 ntBASIC3.35□□□□□ -1.87
Trav5d-4Q5R1F6 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Trav5d-4Q5R1F6 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Trav5d-4Q5R1F6 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Trav5d-4Q5R1F6 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms